RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 MMEL1Q495T6 779 aa17.45■□□□□ 0.38
SNX1-208ENST00000559844 ARSIQ5FYB1 569 aa17.45■□□□□ 0.38
SNX1-208ENST00000559844 SPATA19Q7Z5L4 167 aa17.45■□□□□ 0.38
SNX1-208ENST00000559844 HPS6Q86YV9 775 aa17.45■□□□□ 0.38
SNX1-208ENST00000559844 HOMEZQ8IX15 550 aa17.45■□□□□ 0.38
SNX1-208ENST00000559844 OR2T3Q8NH03 318 aa17.45■□□□□ 0.38
SNX1-208ENST00000559844 TUBGCP3Q96CW5 907 aa17.45■□□□□ 0.38
SNX1-208ENST00000559844 FAM129BQ96TA1 746 aa17.45■□□□□ 0.38
SNX1-208ENST00000559844 TUBB1Q9H4B7 451 aa17.45■□□□□ 0.38
SNX1-208ENST00000559844 RDH14Q9HBH5 336 aa17.45■□□□□ 0.38
SNX1-208ENST00000559844 MRPL40Q9NQ50 206 aaKnown RBP17.45■□□□□ 0.38
SNX1-208ENST00000559844 CACNA1IQ9P0X4 2223 aa17.45■□□□□ 0.38
SNX1-208ENST00000559844 DKK3Q9UBP4 350 aa17.45■□□□□ 0.38
SNX1-208ENST00000559844 TCRBV21S2A2A0A5A6 115 aa17.44■□□□□ 0.38
SNX1-208ENST00000559844 UPK3BL1B0FP48 263 aa17.44■□□□□ 0.38
SNX1-208ENST00000559844 UPK3BL2E5RIL1 263 aa17.44■□□□□ 0.38
SNX1-208ENST00000559844 LEFTY1O75610 366 aa17.44■□□□□ 0.38
SNX1-208ENST00000559844 SLC34A2O95436 690 aa17.44■□□□□ 0.38
SNX1-208ENST00000559844 DCDC1P59894 354 aa17.44■□□□□ 0.38
SNX1-208ENST00000559844 GSTA3Q16772 222 aa17.44■□□□□ 0.38
SNX1-208ENST00000559844 KIF19Q2TAC6 998 aa17.44■□□□□ 0.38
SNX1-208ENST00000559844 FBXO48Q5FWF7 155 aa17.44■□□□□ 0.38
SNX1-208ENST00000559844 OGFOD2Q6N063 350 aa17.44■□□□□ 0.38
SNX1-208ENST00000559844 METTL2BQ6P1Q9 378 aaKnown RBP17.44■□□□□ 0.38
SNX1-208ENST00000559844 DSG4Q86SJ6 1040 aa17.44■□□□□ 0.38
SNX1-208ENST00000559844 MMAAQ8IVH4 418 aaKnown RBP17.44■□□□□ 0.38
SNX1-208ENST00000559844 HMGCLL1Q8TB92 370 aa17.44■□□□□ 0.38
SNX1-208ENST00000559844 MKRN2Q9H000 416 aaKnown RBP17.44■□□□□ 0.38
SNX1-208ENST00000559844 RSPH9Q9H1X1 276 aaPredicted RBP17.44■□□□□ 0.38
SNX1-208ENST00000559844 SMOXQ9NWM0 555 aa17.44■□□□□ 0.38
SNX1-208ENST00000559844 CCDC167Q9P0B6 97 aa17.44■□□□□ 0.38
SNX1-208ENST00000559844 POLG2Q9UHN1 485 aa17.44■□□□□ 0.38
SNX1-208ENST00000559844 BBIP1A8MTZ0 92 aa17.44■□□□□ 0.38
SNX1-208ENST00000559844 RNASEH1O60930 286 aaKnown RBP17.44■□□□□ 0.38
SNX1-208ENST00000559844 PRNPP04156 253 aa17.44■□□□□ 0.38
SNX1-208ENST00000559844 ALDOCP09972 364 aaKnown RBP17.44■□□□□ 0.38
SNX1-208ENST00000559844 LINC00032P0C843 101 aa17.44■□□□□ 0.38
SNX1-208ENST00000559844 ANPEPP15144 967 aa17.44■□□□□ 0.38
SNX1-208ENST00000559844 VCLP18206 1134 aa17.44■□□□□ 0.38
SNX1-208ENST00000559844 XPAP23025 273 aaPredicted RBP17.44■□□□□ 0.38
SNX1-208ENST00000559844 DGKEP52429 567 aa17.44■□□□□ 0.38
SNX1-208ENST00000559844 SESN3P58005 492 aa17.44■□□□□ 0.38
SNX1-208ENST00000559844 ZNF805Q5CZA5 627 aa17.44■□□□□ 0.38
SNX1-208ENST00000559844 SULT1C3Q6IMI6 304 aa17.44■□□□□ 0.38
SNX1-208ENST00000559844 LRRC74BQ6ZQY2 392 aa17.44■□□□□ 0.38
SNX1-208ENST00000559844 PHYKPLQ8IUZ5 450 aa17.44■□□□□ 0.38
SNX1-208ENST00000559844 MIER2Q8N344 545 aa17.44■□□□□ 0.38
SNX1-208ENST00000559844 PPFIBP2Q8ND30 876 aa17.44■□□□□ 0.38
SNX1-208ENST00000559844 CCDC124Q96CT7 223 aaKnown RBP17.44■□□□□ 0.38
SNX1-208ENST00000559844 CDRT15Q96T59 188 aa17.44■□□□□ 0.38
SNX1-208ENST00000559844 NPAS2Q99743 824 aa17.44■□□□□ 0.38
SNX1-208ENST00000559844 IER2Q9BTL4 223 aa17.44■□□□□ 0.38
SNX1-208ENST00000559844 SLC6A17Q9H1V8 727 aa17.44■□□□□ 0.38
SNX1-208ENST00000559844 FBRSQ9HAH7 460 aa17.44■□□□□ 0.38
SNX1-208ENST00000559844 S100A14Q9HCY8 104 aa17.44■□□□□ 0.38
SNX1-208ENST00000559844 POLMQ9NP87 494 aaPredicted RBP17.44■□□□□ 0.38
SNX1-208ENST00000559844 RIC8BQ9NVN3 520 aa17.44■□□□□ 0.38
SNX1-208ENST00000559844 NFKBIL1Q9UBC1 381 aaPredicted RBP17.44■□□□□ 0.38
SNX1-208ENST00000559844 PTBP2Q9UKA9 531 aaKnown RBP17.44■□□□□ 0.38
SNX1-208ENST00000559844 PPM1HQ9ULR3 514 aa17.44■□□□□ 0.38
SNX1-208ENST00000559844 BTRCQ9Y297 605 aa17.44■□□□□ 0.38
SNX1-208ENST00000559844 LRRC42Q9Y546 428 aa17.44■□□□□ 0.38
SNX1-208ENST00000559844 HGFP14210 728 aa17.43■□□□□ 0.38
SNX1-208ENST00000559844 GPX3P22352 226 aa17.43■□□□□ 0.38
SNX1-208ENST00000559844 PSMD8P48556 350 aa17.43■□□□□ 0.38
SNX1-208ENST00000559844 GTF2H2Q13888 395 aa17.43■□□□□ 0.38
SNX1-208ENST00000559844 CCNIQ14094 377 aa17.43■□□□□ 0.38
SNX1-208ENST00000559844 POM121L1PQ3SYA9 428 aa17.43■□□□□ 0.38
SNX1-208ENST00000559844 PIGGQ5H8A4 983 aa17.43■□□□□ 0.38
SNX1-208ENST00000559844 REP15Q6BDI9 236 aa17.43■□□□□ 0.38
SNX1-208ENST00000559844 GTF2H2CQ6P1K8 395 aa17.43■□□□□ 0.38
SNX1-208ENST00000559844 HACD2Q6Y1H2 254 aa17.43■□□□□ 0.38
SNX1-208ENST00000559844 ADGRG6Q86SQ4 1221 aa17.43■□□□□ 0.38
SNX1-208ENST00000559844 PIP4K2CQ8TBX8 421 aa17.43■□□□□ 0.38
SNX1-208ENST00000559844 DCUN1D1Q96GG9 259 aa17.43■□□□□ 0.38
SNX1-208ENST00000559844 RSRC1Q96IZ7 334 aaKnown RBP17.43■□□□□ 0.38
SNX1-208ENST00000559844 SPATA16Q9BXB7 569 aa17.43■□□□□ 0.38
SNX1-208ENST00000559844 FAM83DQ9H4H8 585 aa17.43■□□□□ 0.38
SNX1-208ENST00000559844 TSR3Q9UJK0 312 aaKnown RBP17.43■□□□□ 0.38
SNX1-208ENST00000559844 SARDHQ9UL12 918 aa17.43■□□□□ 0.38
SNX1-208ENST00000559844 TIMM22Q9Y584 194 aa17.43■□□□□ 0.38
SNX1-208ENST00000559844 A0A1B0GTL3 188 aa17.42■□□□□ 0.38
SNX1-208ENST00000559844 CFAP99D6REC4 459 aa17.42■□□□□ 0.38
SNX1-208ENST00000559844 KPNA3O00505 521 aaPredicted RBP17.42■□□□□ 0.38
SNX1-208ENST00000559844 OTCP00480 354 aa17.42■□□□□ 0.38
SNX1-208ENST00000559844 PRR35P0CG20 571 aa17.42■□□□□ 0.38
SNX1-208ENST00000559844 IDO1P14902 403 aa17.42■□□□□ 0.38
SNX1-208ENST00000559844 TIMP2P16035 220 aa17.42■□□□□ 0.38
SNX1-208ENST00000559844 MRPL19P49406 292 aaKnown RBP17.42■□□□□ 0.38
SNX1-208ENST00000559844 GRIK2Q13002 908 aa17.42■□□□□ 0.38
SNX1-208ENST00000559844 XKR7Q5GH72 579 aa17.42■□□□□ 0.38
SNX1-208ENST00000559844 CDKL4Q5MAI5 379 aa17.42■□□□□ 0.38
SNX1-208ENST00000559844 TCHHL1Q5QJ38 904 aaPredicted RBP17.42■□□□□ 0.38
SNX1-208ENST00000559844 ZNF776Q68DI1 518 aaPredicted RBP17.42■□□□□ 0.38
SNX1-208ENST00000559844 RFLNAQ6ZTI6 216 aa17.42■□□□□ 0.38
SNX1-208ENST00000559844 GOLGA7Q7Z5G4 137 aa17.42■□□□□ 0.38
SNX1-208ENST00000559844 TMIEQ8NEW7 156 aa17.42■□□□□ 0.38
SNX1-208ENST00000559844 TSTD1Q8NFU3 115 aa17.42■□□□□ 0.38
SNX1-208ENST00000559844 UBTD2Q8WUN7 234 aa17.42■□□□□ 0.38
SNX1-208ENST00000559844 HMGB4Q8WW32 186 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms