RNA–Protein interactions for RNA: ENST00000559496.5

ZEB1-216, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-216ENST00000559496 OLFM1Q99784 485 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 ECSITQ9BQ95 431 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 NEURL2Q9BR09 285 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 AIFM2Q9BRQ8 373 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 HAUS8Q9BT25 410 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 TBC1D10AQ9BXI6 508 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 PABPC3Q9H361 631 aaKnown RBP6.95□□□□□ -1.3
ZEB1-216ENST00000559496 CDC42EP4Q9H3Q1 356 aaKnown RBP6.95□□□□□ -1.3
ZEB1-216ENST00000559496 PDFQ9HBH1 243 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 GLOD4Q9HC38 313 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 NT5MQ9NPB1 228 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 ARMC1Q9NVT9 282 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 GDE1Q9NZC3 331 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 SELENONQ9NZV5 590 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 CDH22Q9UJ99 828 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 PADI4Q9UM07 663 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 ERVK-11Q9UQG0 969 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 TRAF6Q9Y4K3 522 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 WNT6Q9Y6F9 365 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 TRBV23-1A0A0A0MS06 115 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 IQANK1A0A1B0GTG1 560 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 ERI2A8K979 691 aaKnown RBP6.95□□□□□ -1.3
ZEB1-216ENST00000559496 NEDD8-MDP1E9PL57 170 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 CBX4O00257 560 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 PSMD3O43242 534 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 TBX10O75333 385 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 TRMUO75648 421 aaKnown RBP6.95□□□□□ -1.3
ZEB1-216ENST00000559496 ANXA9O76027 345 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 ZWINTO95229 277 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 AP2A1O95782 977 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 SHBGP04278 402 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 ZCCHC18P0CG32 403 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 CDH3P22223 829 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 CSKP41240 450 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 VIPR2P41587 438 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 MAGEA4P43358 317 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 IFNAR2P48551 515 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 PCYT1AP49585 367 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 NUP107P57740 925 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 SUMO1P63165 101 aaKnown RBP6.95□□□□□ -1.3
ZEB1-216ENST00000559496 SLC10A7Q0GE19 358 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 ASPHQ12797 758 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 DNAJC3Q13217 504 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 MTM1Q13496 603 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 ZNF235Q14590 738 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 CYTH1Q15438 398 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 CRY1Q16526 586 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 TNFAIP8L3Q5GJ75 292 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 FSCBQ5H9T9 825 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 FAM78AQ5JUQ0 283 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 FNBP1LQ5T0N5 605 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 PKN3Q6P5Z2 889 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 SLC51BQ86UW2 128 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 TMEM25Q86YD3 366 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.95□□□□□ -1.3
ZEB1-216ENST00000559496 TEX26Q8N6G2 289 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 LSMEM1Q8N8F7 131 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 KIAA1958Q8N8K9 716 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 DCAF4L2Q8NA75 395 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 CEP70Q8NHQ1 597 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 FIBINQ8TAL6 211 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 TTC8Q8TAM2 541 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 MDM1Q8TC05 714 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 WFDC5Q8TCV5 224 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 NRG4Q8WWG1 115 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 SMARCD2Q92925 531 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 STMN2Q93045 179 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 RSPRY1Q96DX4 576 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 HSPBAP1Q96EW2 488 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 VMP1Q96GC9 406 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 ZNF419Q96HQ0 510 aaPredicted RBP6.95□□□□□ -1.3
ZEB1-216ENST00000559496 C9orf72Q96LT7 481 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 RIPOR3Q96MK2 946 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 TTC25Q96NG3 672 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 ZNF599Q96NL3 588 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 SERPINB12Q96P63 405 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 FCRL5Q96RD9 977 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 SELENOSQ9BQE4 189 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 FEM1AQ9BSK4 669 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 MLPHQ9BV36 600 aaPredicted RBP6.95□□□□□ -1.3
ZEB1-216ENST00000559496 SSBP3Q9BWW4 388 aaPredicted RBP6.95□□□□□ -1.3
ZEB1-216ENST00000559496 BBS2Q9BXC9 721 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 ACE2Q9BYF1 805 aaPredicted RBP6.95□□□□□ -1.3
ZEB1-216ENST00000559496 MRPS26Q9BYN8 205 aaKnown RBP6.95□□□□□ -1.3
ZEB1-216ENST00000559496 OSBPL6Q9BZF3 934 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 RBM38Q9H0Z9 239 aaKnown RBP6.95□□□□□ -1.3
ZEB1-216ENST00000559496 LINC00597Q9H2U6 94 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 TTYH1Q9H313 450 aaPredicted RBP6.95□□□□□ -1.3
ZEB1-216ENST00000559496 SEMA4AQ9H3S1 761 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 XAB2Q9HCS7 855 aaKnown RBP6.95□□□□□ -1.3
ZEB1-216ENST00000559496 SPHK2Q9NRA0 654 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 AASDHPPTQ9NRN7 309 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 DUS2Q9NX74 493 aaKnown RBP6.95□□□□□ -1.3
ZEB1-216ENST00000559496 NINJ2Q9NZG7 142 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 UBA2Q9UBT2 640 aaPredicted RBP6.95□□□□□ -1.3
ZEB1-216ENST00000559496 PFDN2Q9UHV9 154 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 VPS28Q9UK41 221 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 CDH7Q9ULB5 785 aa6.95□□□□□ -1.3
ZEB1-216ENST00000559496 TDRKHQ9Y2W6 561 aaKnown RBP6.95□□□□□ -1.3
ZEB1-216ENST00000559496 AAR2Q9Y312 384 aaKnown RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms