RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 PPM1DO15297 605 aa7.24□□□□□ -1.25
SPG11-213ENST00000558988 ZW10O43264 779 aa7.24□□□□□ -1.25
SPG11-213ENST00000558988 MTX2O75431 263 aa7.24□□□□□ -1.25
SPG11-213ENST00000558988 PMPCBO75439 489 aa7.24□□□□□ -1.25
SPG11-213ENST00000558988 EML2O95834 649 aa7.24□□□□□ -1.25
SPG11-213ENST00000558988 PF4P02776 101 aa7.24□□□□□ -1.25
SPG11-213ENST00000558988 LIPCP11150 499 aa7.24□□□□□ -1.25
SPG11-213ENST00000558988 CD1CP29017 333 aa7.24□□□□□ -1.25
SPG11-213ENST00000558988 CSF2RBP32927 897 aa7.24□□□□□ -1.25
SPG11-213ENST00000558988 CSTF2P33240 577 aaKnown RBP eCLIP7.24□□□□□ -1.25
SPG11-213ENST00000558988 NOP2P46087 812 aaKnown RBP7.24□□□□□ -1.25
SPG11-213ENST00000558988 ZFP36L1Q07352 338 aaKnown RBP7.24□□□□□ -1.25
SPG11-213ENST00000558988 TRIM14Q14142 442 aa7.24□□□□□ -1.25
SPG11-213ENST00000558988 SEPT7Q16181 437 aaKnown RBP7.24□□□□□ -1.25
SPG11-213ENST00000558988 PYCR3Q53H96 274 aa7.24□□□□□ -1.25
SPG11-213ENST00000558988 INO80CQ6PI98 192 aaPredicted RBP7.24□□□□□ -1.25
SPG11-213ENST00000558988 SLITRK4Q8IW52 837 aa7.24□□□□□ -1.25
SPG11-213ENST00000558988 PLD5Q8N7P1 536 aa7.24□□□□□ -1.25
SPG11-213ENST00000558988 SPATA22Q8NHS9 363 aa7.24□□□□□ -1.25
SPG11-213ENST00000558988 SLC37A2Q8TED4 501 aa7.24□□□□□ -1.25
SPG11-213ENST00000558988 NCSTNQ92542 709 aa7.24□□□□□ -1.25
SPG11-213ENST00000558988 MAML1Q92585 1016 aa7.24□□□□□ -1.25
SPG11-213ENST00000558988 EXTL1Q92935 676 aa7.24□□□□□ -1.25
SPG11-213ENST00000558988 ART4Q93070 314 aa7.24□□□□□ -1.25
SPG11-213ENST00000558988 HAUS1Q96CS2 278 aa7.24□□□□□ -1.25
SPG11-213ENST00000558988 ZG16BQ96DA0 208 aa7.24□□□□□ -1.25
SPG11-213ENST00000558988 HDAC11Q96DB2 347 aa7.24□□□□□ -1.25
SPG11-213ENST00000558988 ZNF503Q96F45 646 aa7.24□□□□□ -1.25
SPG11-213ENST00000558988 TSGA13Q96PP4 275 aa7.24□□□□□ -1.25
SPG11-213ENST00000558988 RNF157Q96PX1 679 aa7.24□□□□□ -1.25
SPG11-213ENST00000558988 CTRCQ99895 268 aa7.24□□□□□ -1.25
SPG11-213ENST00000558988 ANP32EQ9BTT0 268 aa7.24□□□□□ -1.25
SPG11-213ENST00000558988 MLPHQ9BV36 600 aaPredicted RBP7.24□□□□□ -1.25
SPG11-213ENST00000558988 SPATA16Q9BXB7 569 aa7.24□□□□□ -1.25
SPG11-213ENST00000558988 SLC12A9Q9BXP2 914 aa7.24□□□□□ -1.25
SPG11-213ENST00000558988 ADGRE3Q9BY15 652 aa7.24□□□□□ -1.25
SPG11-213ENST00000558988 GPR63Q9BZJ6 419 aa7.24□□□□□ -1.25
SPG11-213ENST00000558988 OR2AG1Q9H205 316 aa7.24□□□□□ -1.25
SPG11-213ENST00000558988 TSPY26PQ9H489 355 aa7.24□□□□□ -1.25
SPG11-213ENST00000558988 GOLPH3Q9H4A6 298 aa7.24□□□□□ -1.25
SPG11-213ENST00000558988 FAM83DQ9H4H8 585 aa7.24□□□□□ -1.25
SPG11-213ENST00000558988 ABHD10Q9NUJ1 306 aa7.24□□□□□ -1.25
SPG11-213ENST00000558988 SLC39A1Q9NY26 324 aa7.24□□□□□ -1.25
SPG11-213ENST00000558988 TRIM10Q9UDY6 481 aa7.24□□□□□ -1.25
SPG11-213ENST00000558988 NENFQ9UMX5 172 aa7.24□□□□□ -1.25
SPG11-213ENST00000558988 DNAJC16Q9Y2G8 782 aa7.24□□□□□ -1.25
SPG11-213ENST00000558988 PCDHGA7Q9Y5G6 932 aa7.24□□□□□ -1.25
SPG11-213ENST00000558988 PCYT1BQ9Y5K3 369 aaPredicted RBP7.24□□□□□ -1.25
SPG11-213ENST00000558988 FREM2Q5SZK8 3169 aa7.23□□□□□ -1.25
SPG11-213ENST00000558988 ZFC3H1O60293 1989 aaKnown RBP7.23□□□□□ -1.25
SPG11-213ENST00000558988 SCN8AQ9UQD0 1980 aa7.23□□□□□ -1.25
SPG11-213ENST00000558988 IGHV1OR21-1A0A087WYE8 117 aa7.23□□□□□ -1.25
SPG11-213ENST00000558988 MACROD2A1Z1Q3 448 aa7.23□□□□□ -1.25
SPG11-213ENST00000558988 PDZK1P1A8MUH7 402 aa7.23□□□□□ -1.25
SPG11-213ENST00000558988 PPP1R12AO14974 1030 aaPredicted RBP7.23□□□□□ -1.25
SPG11-213ENST00000558988 NVLO15381 856 aaKnown RBP7.23□□□□□ -1.25
SPG11-213ENST00000558988 MFAP3LO75121 409 aa7.23□□□□□ -1.25
SPG11-213ENST00000558988 SLC25A14O95258 325 aaPredicted RBP7.23□□□□□ -1.25
SPG11-213ENST00000558988 MT-CYBP00156 380 aaPredicted RBP7.23□□□□□ -1.25
SPG11-213ENST00000558988 PYGLP06737 847 aa7.23□□□□□ -1.25
SPG11-213ENST00000558988 C8BP07358 591 aa7.23□□□□□ -1.25
SPG11-213ENST00000558988 MMP2P08253 660 aa7.23□□□□□ -1.25
SPG11-213ENST00000558988 PLA2G2AP14555 144 aa7.23□□□□□ -1.25
SPG11-213ENST00000558988 COMTP21964 271 aa7.23□□□□□ -1.25
SPG11-213ENST00000558988 TEAD1P28347 426 aa7.23□□□□□ -1.25
SPG11-213ENST00000558988 MAN1A1P33908 653 aa7.23□□□□□ -1.25
SPG11-213ENST00000558988 SPINT3P49223 89 aa7.23□□□□□ -1.25
SPG11-213ENST00000558988 CORO7P57737 925 aa7.23□□□□□ -1.25
SPG11-213ENST00000558988 HHEXQ03014 270 aa7.23□□□□□ -1.25
SPG11-213ENST00000558988 PPIDQ08752 370 aaKnown RBP7.23□□□□□ -1.25
SPG11-213ENST00000558988 NFATC3Q12968 1075 aa7.23□□□□□ -1.25
SPG11-213ENST00000558988 PEX6Q13608 980 aa7.23□□□□□ -1.25
SPG11-213ENST00000558988 PDK1Q15118 436 aa7.23□□□□□ -1.25
SPG11-213ENST00000558988 INSCQ1MX18 579 aa7.23□□□□□ -1.25
SPG11-213ENST00000558988 ZNF569Q5MCW4 686 aa7.23□□□□□ -1.25
SPG11-213ENST00000558988 CCDC70Q6NSX1 233 aa7.23□□□□□ -1.25
SPG11-213ENST00000558988 NT5DC3Q86UY8 548 aa7.23□□□□□ -1.25
SPG11-213ENST00000558988 ZC3H18Q86VM9 953 aaKnown RBP7.23□□□□□ -1.25
SPG11-213ENST00000558988 PHYKPLQ8IUZ5 450 aa7.23□□□□□ -1.25
SPG11-213ENST00000558988 CCDC50Q8IVM0 306 aa7.23□□□□□ -1.25
SPG11-213ENST00000558988 TRIM48Q8IWZ4 208 aa7.23□□□□□ -1.25
SPG11-213ENST00000558988 CBARPQ8N350 705 aaPredicted RBP7.23□□□□□ -1.25
SPG11-213ENST00000558988 SLC25A41Q8N5S1 370 aa7.23□□□□□ -1.25
SPG11-213ENST00000558988 CNTD1Q8N815 330 aa7.23□□□□□ -1.25
SPG11-213ENST00000558988 CCDC112Q8NEF3 446 aa7.23□□□□□ -1.25
SPG11-213ENST00000558988 OR10G6Q8NH81 332 aa7.23□□□□□ -1.25
SPG11-213ENST00000558988 GDAP1Q8TB36 358 aa7.23□□□□□ -1.25
SPG11-213ENST00000558988 FAM71BQ8TC56 605 aa7.23□□□□□ -1.25
SPG11-213ENST00000558988 Q8TCH9 128 aa7.23□□□□□ -1.25
SPG11-213ENST00000558988 TMEM159Q96B96 161 aa7.23□□□□□ -1.25
SPG11-213ENST00000558988 FAF2Q96CS3 445 aa7.23□□□□□ -1.25
SPG11-213ENST00000558988 DNAJC7Q99615 494 aa7.23□□□□□ -1.25
SPG11-213ENST00000558988 STN1Q9H668 368 aaKnown RBP7.23□□□□□ -1.25
SPG11-213ENST00000558988 NHEJ1Q9H9Q4 299 aaPredicted RBP7.23□□□□□ -1.25
SPG11-213ENST00000558988 BPIFA1Q9NP55 256 aa7.23□□□□□ -1.25
SPG11-213ENST00000558988 PRDM8Q9NQV8 689 aa7.23□□□□□ -1.25
SPG11-213ENST00000558988 KLC4Q9NSK0 619 aa7.23□□□□□ -1.25
SPG11-213ENST00000558988 SAE1Q9UBE0 346 aaPredicted RBP7.23□□□□□ -1.25
SPG11-213ENST00000558988 TBC1D29Q9UFV1 150 aa7.23□□□□□ -1.25
SPG11-213ENST00000558988 DNPEPQ9ULA0 475 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms