RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 CCR7P32248 378 aa15.17■□□□□ 0.02
LINC01220-201ENST00000558575 PPARGP37231 505 aaPredicted RBP15.17■□□□□ 0.02
LINC01220-201ENST00000558575 MAGEA4P43358 317 aa15.17■□□□□ 0.02
LINC01220-201ENST00000558575 RPIAP49247 311 aa15.17■□□□□ 0.02
LINC01220-201ENST00000558575 DUSP3P51452 185 aaPredicted RBP15.17■□□□□ 0.02
LINC01220-201ENST00000558575 SEPT7Q16181 437 aaKnown RBP15.17■□□□□ 0.02
LINC01220-201ENST00000558575 LINC00303Q3SY05 128 aa15.17■□□□□ 0.02
LINC01220-201ENST00000558575 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.17■□□□□ 0.02
LINC01220-201ENST00000558575 UBAP2Q5T6F2 1119 aaKnown RBP15.17■□□□□ 0.02
LINC01220-201ENST00000558575 ZNF549Q6P9A3 640 aa15.17■□□□□ 0.02
LINC01220-201ENST00000558575 CNSTQ6PJW8 725 aa15.17■□□□□ 0.02
LINC01220-201ENST00000558575 ATG14Q6ZNE5 492 aa15.17■□□□□ 0.02
LINC01220-201ENST00000558575 CNTN4Q8IWV2 1026 aa15.17■□□□□ 0.02
LINC01220-201ENST00000558575 LSMEM2Q8N112 164 aa15.17■□□□□ 0.02
LINC01220-201ENST00000558575 C2CD4AQ8NCU7 369 aaPredicted RBP15.17■□□□□ 0.02
LINC01220-201ENST00000558575 SPDYE1Q8NFV5 336 aaPredicted RBP15.17■□□□□ 0.02
LINC01220-201ENST00000558575 IFI44Q8TCB0 444 aa15.17■□□□□ 0.02
LINC01220-201ENST00000558575 HM13Q8TCT9 377 aa15.17■□□□□ 0.02
LINC01220-201ENST00000558575 PYROXD1Q8WU10 500 aa15.17■□□□□ 0.02
LINC01220-201ENST00000558575 GLMNQ92990 594 aa15.17■□□□□ 0.02
LINC01220-201ENST00000558575 COG4Q9H9E3 785 aa15.17■□□□□ 0.02
LINC01220-201ENST00000558575 POLR1BQ9H9Y6 1135 aa15.17■□□□□ 0.02
LINC01220-201ENST00000558575 SMYD2Q9NRG4 433 aa15.17■□□□□ 0.02
LINC01220-201ENST00000558575 STARD5Q9NSY2 213 aa15.17■□□□□ 0.02
LINC01220-201ENST00000558575 NCKIPSDQ9NZQ3 722 aa15.17■□□□□ 0.02
LINC01220-201ENST00000558575 GALPQ9UBC7 116 aa15.17■□□□□ 0.02
LINC01220-201ENST00000558575 PSMD13Q9UNM6 376 aa15.17■□□□□ 0.02
LINC01220-201ENST00000558575 MED16Q9Y2X0 877 aa15.17■□□□□ 0.02
LINC01220-201ENST00000558575 UBA6A0AVT1 1052 aaPredicted RBP15.16■□□□□ 0.02
LINC01220-201ENST00000558575 SLC5A10A0PJK1 596 aa15.16■□□□□ 0.02
LINC01220-201ENST00000558575 OR52A4PA6NMU1 304 aa15.16■□□□□ 0.02
LINC01220-201ENST00000558575 SUV39H1O43463 412 aa15.16■□□□□ 0.02
LINC01220-201ENST00000558575 PIAS1O75925 651 aa15.16■□□□□ 0.02
LINC01220-201ENST00000558575 AHSGP02765 367 aa15.16■□□□□ 0.02
LINC01220-201ENST00000558575 OR56A5P0C7T3 313 aa15.16■□□□□ 0.02
LINC01220-201ENST00000558575 GLB1P16278 677 aa15.16■□□□□ 0.02
LINC01220-201ENST00000558575 VCLP18206 1134 aa15.16■□□□□ 0.02
LINC01220-201ENST00000558575 XRCC1P18887 633 aaPredicted RBP15.16■□□□□ 0.02
LINC01220-201ENST00000558575 LEPRP48357 1165 aaKnown RBP15.16■□□□□ 0.02
LINC01220-201ENST00000558575 ADARP55265 1226 aaKnown RBP15.16■□□□□ 0.02
LINC01220-201ENST00000558575 EIF3BP55884 814 aaKnown RBP15.16■□□□□ 0.02
LINC01220-201ENST00000558575 UBE2IP63279 158 aaKnown RBP15.16■□□□□ 0.02
LINC01220-201ENST00000558575 E2F1Q01094 437 aa15.16■□□□□ 0.02
LINC01220-201ENST00000558575 CAPRIN2Q6IMN6 1127 aaKnown RBP15.16■□□□□ 0.02
LINC01220-201ENST00000558575 ZNF438Q7Z4V0 828 aa15.16■□□□□ 0.02
LINC01220-201ENST00000558575 CCDC25Q86WR0 208 aa15.16■□□□□ 0.02
LINC01220-201ENST00000558575 LRRC6Q86X45 466 aa15.16■□□□□ 0.02
LINC01220-201ENST00000558575 LMNTD2Q8IXW0 634 aa15.16■□□□□ 0.02
LINC01220-201ENST00000558575 GSDMBQ8TAX9 411 aa15.16■□□□□ 0.02
LINC01220-201ENST00000558575 CALML6Q8TD86 181 aa15.16■□□□□ 0.02
LINC01220-201ENST00000558575 CCDC74AQ96AQ1 378 aa15.16■□□□□ 0.02
LINC01220-201ENST00000558575 INSM2Q96T92 566 aaPredicted RBP15.16■□□□□ 0.02
LINC01220-201ENST00000558575 WWP1Q9H0M0 922 aa15.16■□□□□ 0.02
LINC01220-201ENST00000558575 OR52A5Q9H2C5 316 aa15.16■□□□□ 0.02
LINC01220-201ENST00000558575 LRRC4CQ9HCJ2 640 aa15.16■□□□□ 0.02
LINC01220-201ENST00000558575 INTS10Q9NVR2 710 aaKnown RBP15.16■□□□□ 0.02
LINC01220-201ENST00000558575 LRIT1Q9P2V4 623 aa15.16■□□□□ 0.02
LINC01220-201ENST00000558575 ACSL5Q9ULC5 683 aa15.16■□□□□ 0.02
LINC01220-201ENST00000558575 CDYLQ9Y232 598 aa15.16■□□□□ 0.02
LINC01220-201ENST00000558575 PIKFYVEQ9Y2I7 2098 aa15.16■□□□□ 0.02
LINC01220-201ENST00000558575 ZFC3H1O60293 1989 aaKnown RBP15.15■□□□□ 0.02
LINC01220-201ENST00000558575 ABCA12Q86UK0 2595 aa15.15■□□□□ 0.02
LINC01220-201ENST00000558575 KIR2DS5A0A0G2JLQ3 304 aa15.15■□□□□ 0.02
LINC01220-201ENST00000558575 A0A0G2JNG1 304 aa15.15■□□□□ 0.02
LINC01220-201ENST00000558575 KLHL33A6NCF5 533 aa15.15■□□□□ 0.02
LINC01220-201ENST00000558575 OR5K4A6NMS3 321 aa15.15■□□□□ 0.02
LINC01220-201ENST00000558575 PDZK1P1A8MUH7 402 aa15.15■□□□□ 0.02
LINC01220-201ENST00000558575 CXorf49A8MYA2 514 aaPredicted RBP15.15■□□□□ 0.02
LINC01220-201ENST00000558575 KIR2DS3K7RE56 304 aa15.15■□□□□ 0.02
LINC01220-201ENST00000558575 QSOX1O00391 747 aa15.15■□□□□ 0.02
LINC01220-201ENST00000558575 NUDT21O43809 227 aaKnown RBP15.15■□□□□ 0.02
LINC01220-201ENST00000558575 NIPSNAP2O75323 286 aa15.15■□□□□ 0.02
LINC01220-201ENST00000558575 CSO75390 466 aaKnown RBP15.15■□□□□ 0.02
LINC01220-201ENST00000558575 PKMP14618 531 aaKnown RBP15.15■□□□□ 0.02
LINC01220-201ENST00000558575 FASLGP48023 281 aa15.15■□□□□ 0.02
LINC01220-201ENST00000558575 PREPP48147 710 aa15.15■□□□□ 0.02
LINC01220-201ENST00000558575 TIAL1Q01085 375 aaKnown RBP eCLIP15.15■□□□□ 0.02
LINC01220-201ENST00000558575 MGAT5Q09328 741 aa15.15■□□□□ 0.02
LINC01220-201ENST00000558575 KIR2DS5Q14953 304 aa15.15■□□□□ 0.02
LINC01220-201ENST00000558575 RPE65Q16518 533 aa15.15■□□□□ 0.02
LINC01220-201ENST00000558575 RNF187Q5TA31 235 aaPredicted RBP15.15■□□□□ 0.02
LINC01220-201ENST00000558575 CCDC81Q6ZN84 652 aa15.15■□□□□ 0.02
LINC01220-201ENST00000558575 CAPN12Q6ZSI9 719 aa15.15■□□□□ 0.02
LINC01220-201ENST00000558575 C3orf62Q6ZUJ4 267 aa15.15■□□□□ 0.02
LINC01220-201ENST00000558575 CYS1Q717R9 158 aa15.15■□□□□ 0.02
LINC01220-201ENST00000558575 VRK3Q8IV63 474 aa15.15■□□□□ 0.02
LINC01220-201ENST00000558575 PALM2Q8IXS6 379 aa15.15■□□□□ 0.02
LINC01220-201ENST00000558575 MAPK15Q8TD08 544 aa15.15■□□□□ 0.02
LINC01220-201ENST00000558575 ELMO1Q92556 727 aa15.15■□□□□ 0.02
LINC01220-201ENST00000558575 RMDN2Q96LZ7 410 aa15.15■□□□□ 0.02
LINC01220-201ENST00000558575 FAM167BQ9BTA0 163 aa15.15■□□□□ 0.02
LINC01220-201ENST00000558575 SARS2Q9NP81 518 aaKnown RBP15.15■□□□□ 0.02
LINC01220-201ENST00000558575 THSD1Q9NS62 852 aa15.15■□□□□ 0.02
LINC01220-201ENST00000558575 CPNE7Q9UBL6 633 aa15.15■□□□□ 0.02
LINC01220-201ENST00000558575 NFU1Q9UMS0 254 aa15.15■□□□□ 0.02
LINC01220-201ENST00000558575 PSAT1Q9Y617 370 aa15.15■□□□□ 0.02
LINC01220-201ENST00000558575 CACNA1DQ01668 2161 aa15.14■□□□□ 0.01
LINC01220-201ENST00000558575 A0A1W2PQM1 296 aa15.14■□□□□ 0.01
LINC01220-201ENST00000558575 OPA1O60313 960 aa15.14■□□□□ 0.01
LINC01220-201ENST00000558575 GPC4O75487 556 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms