RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 RPA4Q13156 261 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 PLCZ1Q86YW0 608 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 TMEM161BQ8NDZ6 487 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 SLC44A1Q8WWI5 657 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 METTL21AQ8WXB1 218 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 RDH8Q9NYR8 311 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 RIMKLBQ9ULI2 386 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 WDR37Q9Y2I8 494 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 RAI2Q9Y5P3 530 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 QSOX1O00391 747 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 H6PDO95479 791 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 MMP3P08254 477 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 SYT16Q17RD7 645 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 MPP5Q8N3R9 675 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 SLC25A36Q96CQ1 311 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 HMCESQ96FZ2 354 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 KCNC2Q96PR1 638 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 PARPBPQ9NWS1 579 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 ELOVL2Q9NXB9 296 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 EDARQ9UNE0 448 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 SLC35F4A4IF30 521 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 MEIS2O14770 477 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 IPO13O94829 963 aaKnown RBP13.76□□□□□ -0.21
SPG11-210ENST00000558319 FESP07332 822 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 SCNN1AP37088 669 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 RGS19P49795 217 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 HSDL1Q3SXM5 330 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 PDCD4Q53EL6 469 aaKnown RBP13.76□□□□□ -0.21
SPG11-210ENST00000558319 ARL13AQ5H913 290 aaPredicted RBP13.76□□□□□ -0.21
SPG11-210ENST00000558319 GALNT12Q8IXK2 581 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 LIX1Q8N485 282 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 CPA6Q8N4T0 437 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 ANKRD52Q8NB46 1076 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 ADAMTS15Q8TE58 950 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 SEC14L1Q92503 715 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 ALG3Q92685 438 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 TRIM2Q9C040 744 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 XKR8Q9H6D3 395 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 CHRAC1Q9NRG0 131 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 CLUHO75153 1309 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 MEN1O00255 615 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 MT-CYBP00156 380 aaPredicted RBP13.76□□□□□ -0.21
SPG11-210ENST00000558319 FGBP02675 491 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 YES1P07947 543 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 MTHFD1P11586 935 aaKnown RBP13.76□□□□□ -0.21
SPG11-210ENST00000558319 BMP6P22004 513 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 PRKCIP41743 596 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 GDI2P50395 445 aaKnown RBP13.76□□□□□ -0.21
SPG11-210ENST00000558319 MTPNP58546 118 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 GANABQ14697 944 aaKnown RBP13.76□□□□□ -0.21
SPG11-210ENST00000558319 FAM76BQ5HYJ3 339 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 DCLRE1AQ6PJP8 1040 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 LRRC69Q6ZNQ3 347 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 SNX20Q7Z614 316 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 SLITRK4Q8IW52 837 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 RAB2BQ8WUD1 216 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 AP2M1Q96CW1 435 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 P2RY11Q96G91 374 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 CDK15Q96Q40 435 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 TAS2R7Q9NYW3 318 aa13.76□□□□□ -0.21
SPG11-210ENST00000558319 KIAA1522Q9P206 1035 aaPredicted RBP13.76□□□□□ -0.21
SPG11-210ENST00000558319 TUBA1BP68363 451 aa13.75□□□□□ -0.21
SPG11-210ENST00000558319 VITQ6UXI7 678 aa13.75□□□□□ -0.21
SPG11-210ENST00000558319 TUBA1AQ71U36 451 aa13.75□□□□□ -0.21
SPG11-210ENST00000558319 METTL27Q8N6F8 245 aaPredicted RBP13.75□□□□□ -0.21
SPG11-210ENST00000558319 ZNF431Q8TF32 576 aaPredicted RBP13.75□□□□□ -0.21
SPG11-210ENST00000558319 HMGB4Q8WW32 186 aa13.75□□□□□ -0.21
SPG11-210ENST00000558319 BEX2Q9BXY8 128 aa13.75□□□□□ -0.21
SPG11-210ENST00000558319 BEX1Q9HBH7 125 aa13.75□□□□□ -0.21
SPG11-210ENST00000558319 EVA1BQ9NVM1 165 aa13.75□□□□□ -0.21
SPG11-210ENST00000558319 ISPDA4D126 451 aa13.75□□□□□ -0.21
SPG11-210ENST00000558319 RIIAD1A6NNX1 92 aa13.75□□□□□ -0.21
SPG11-210ENST00000558319 WNT7AO00755 349 aa13.75□□□□□ -0.21
SPG11-210ENST00000558319 MAFO75444 373 aaPredicted RBP13.75□□□□□ -0.21
SPG11-210ENST00000558319 PSMD10O75832 226 aa13.75□□□□□ -0.21
SPG11-210ENST00000558319 CBLP22681 906 aa13.75□□□□□ -0.21
SPG11-210ENST00000558319 SLC18A2Q05940 514 aa13.75□□□□□ -0.21
SPG11-210ENST00000558319 CDK18Q07002 472 aa13.75□□□□□ -0.21
SPG11-210ENST00000558319 SCGB2B2Q4G0G5 96 aa13.75□□□□□ -0.21
SPG11-210ENST00000558319 PPP2R2DQ66LE6 453 aa13.75□□□□□ -0.21
SPG11-210ENST00000558319 MSANTD2Q6P1R3 559 aa13.75□□□□□ -0.21
SPG11-210ENST00000558319 C17orf64Q86WR6 236 aa13.75□□□□□ -0.21
SPG11-210ENST00000558319 GRHL3Q8TE85 626 aa13.75□□□□□ -0.21
SPG11-210ENST00000558319 B3GNT4Q9C0J1 378 aa13.75□□□□□ -0.21
SPG11-210ENST00000558319 METTL8Q9H825 291 aaKnown RBP13.75□□□□□ -0.21
SPG11-210ENST00000558319 SLC17A6Q9P2U8 582 aa13.75□□□□□ -0.21
SPG11-210ENST00000558319 ERVK-11Q9UQG0 969 aa13.75□□□□□ -0.21
SPG11-210ENST00000558319 E9PAM4 449 aa13.75□□□□□ -0.21
SPG11-210ENST00000558319 PDLIM1O00151 329 aa13.75□□□□□ -0.21
SPG11-210ENST00000558319 CDK14O94921 469 aa13.75□□□□□ -0.21
SPG11-210ENST00000558319 TFPTP0C1Z6 253 aa13.75□□□□□ -0.21
SPG11-210ENST00000558319 FNTBP49356 437 aa13.75□□□□□ -0.21
SPG11-210ENST00000558319 UGT8Q16880 541 aa13.75□□□□□ -0.21
SPG11-210ENST00000558319 ACSBG2Q5FVE4 666 aa13.75□□□□□ -0.21
SPG11-210ENST00000558319 FAM46CQ5VWP2 391 aa13.75□□□□□ -0.21
SPG11-210ENST00000558319 ADNP2Q6IQ32 1131 aa13.75□□□□□ -0.21
SPG11-210ENST00000558319 FAM92BQ6ZTR7 304 aa13.75□□□□□ -0.21
SPG11-210ENST00000558319 FAM71AQ8IYT1 594 aa13.75□□□□□ -0.21
SPG11-210ENST00000558319 SLC37A3Q8NCC5 494 aa13.75□□□□□ -0.21
SPG11-210ENST00000558319 SRFBP1Q8NEF9 429 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms