RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 RIOK2Q9BVS4 552 aaKnown RBP10.35□□□□□ -0.75
TPM1-210ENST00000558264 BRINP2Q9C0B6 783 aa10.35□□□□□ -0.75
TPM1-210ENST00000558264 ATG10Q9H0Y0 220 aa10.35□□□□□ -0.75
TPM1-210ENST00000558264 COQ10BQ9H8M1 238 aa10.35□□□□□ -0.75
TPM1-210ENST00000558264 GID8Q9NWU2 228 aa10.35□□□□□ -0.75
TPM1-210ENST00000558264 KCTD5Q9NXV2 234 aa10.35□□□□□ -0.75
TPM1-210ENST00000558264 UBAP1Q9NZ09 502 aa10.35□□□□□ -0.75
TPM1-210ENST00000558264 PRKAG2Q9UGJ0 569 aa10.35□□□□□ -0.75
TPM1-210ENST00000558264 ST14Q9Y5Y6 855 aa10.35□□□□□ -0.75
TPM1-210ENST00000558264 TCRBV3S1A0A5B6 114 aa10.34□□□□□ -0.75
TPM1-210ENST00000558264 LINC01553A4QN01 128 aa10.34□□□□□ -0.75
TPM1-210ENST00000558264 SAC3D1A6NKF1 404 aa10.34□□□□□ -0.75
TPM1-210ENST00000558264 AGAP14A8MT82 685 aa10.34□□□□□ -0.75
TPM1-210ENST00000558264 FADS2P1A8MWK0 482 aa10.34□□□□□ -0.75
TPM1-210ENST00000558264 K7EPI3 171 aa10.34□□□□□ -0.75
TPM1-210ENST00000558264 ARPC2O15144 300 aa10.34□□□□□ -0.75
TPM1-210ENST00000558264 STAMBPO95630 424 aa10.34□□□□□ -0.75
TPM1-210ENST00000558264 HLA-EP13747 358 aa10.34□□□□□ -0.75
TPM1-210ENST00000558264 PBLDP30039 288 aaPredicted RBP10.34□□□□□ -0.75
TPM1-210ENST00000558264 GSK3BP49841 420 aa10.34□□□□□ -0.75
TPM1-210ENST00000558264 LIPEQ05469 1076 aa10.34□□□□□ -0.75
TPM1-210ENST00000558264 GRIN2CQ14957 1233 aa10.34□□□□□ -0.75
TPM1-210ENST00000558264 FAM109BQ6ICB4 259 aaPredicted RBP10.34□□□□□ -0.75
TPM1-210ENST00000558264 GPR65Q8IYL9 337 aa10.34□□□□□ -0.75
TPM1-210ENST00000558264 SLC22A15Q8IZD6 547 aa10.34□□□□□ -0.75
TPM1-210ENST00000558264 MINDY1Q8N5J2 469 aa10.34□□□□□ -0.75
TPM1-210ENST00000558264 KRTCAP2Q8N6L1 136 aa10.34□□□□□ -0.75
TPM1-210ENST00000558264 OR2T34Q8NGX1 318 aa10.34□□□□□ -0.75
TPM1-210ENST00000558264 OR2T3Q8NH03 318 aa10.34□□□□□ -0.75
TPM1-210ENST00000558264 FRS2Q8WU20 508 aa10.34□□□□□ -0.75
TPM1-210ENST00000558264 RSPRY1Q96DX4 576 aa10.34□□□□□ -0.75
TPM1-210ENST00000558264 MRGPRX3Q96LB0 322 aa10.34□□□□□ -0.75
TPM1-210ENST00000558264 NR1H4Q96RI1 486 aaPredicted RBP10.34□□□□□ -0.75
TPM1-210ENST00000558264 SLC29A1Q99808 456 aa10.34□□□□□ -0.75
TPM1-210ENST00000558264 HOPXQ9BPY8 73 aaPredicted RBP10.34□□□□□ -0.75
TPM1-210ENST00000558264 HEPHQ9BQS7 1158 aa10.34□□□□□ -0.75
TPM1-210ENST00000558264 CPEB1Q9BZB8 566 aaKnown RBP10.34□□□□□ -0.75
TPM1-210ENST00000558264 ACTR8Q9H981 624 aa10.34□□□□□ -0.75
TPM1-210ENST00000558264 MRPL40Q9NQ50 206 aaKnown RBP10.34□□□□□ -0.75
TPM1-210ENST00000558264 ABCD2Q9UBJ2 740 aa10.34□□□□□ -0.75
TPM1-210ENST00000558264 COQ6Q9Y2Z9 468 aa10.34□□□□□ -0.75
TPM1-210ENST00000558264 MRPS23Q9Y3D9 190 aaKnown RBP10.34□□□□□ -0.75
TPM1-210ENST00000558264 PCDHA9Q9Y5H5 950 aa10.34□□□□□ -0.75
TPM1-210ENST00000558264 IRAK3Q9Y616 596 aa10.34□□□□□ -0.75
TPM1-210ENST00000558264 HELZP42694 1942 aaKnown RBP10.34□□□□□ -0.75
TPM1-210ENST00000558264 C15orf38-AP3S2A0A0A6YYH1 394 aa10.34□□□□□ -0.75
TPM1-210ENST00000558264 PEX1O43933 1283 aa10.34□□□□□ -0.75
TPM1-210ENST00000558264 STK16O75716 305 aa10.34□□□□□ -0.75
TPM1-210ENST00000558264 OR56A5P0C7T3 313 aa10.34□□□□□ -0.75
TPM1-210ENST00000558264 HSPA8P11142 646 aaKnown RBP10.34□□□□□ -0.75
TPM1-210ENST00000558264 EPB42P16452 691 aa10.34□□□□□ -0.75
TPM1-210ENST00000558264 EPORP19235 508 aa10.34□□□□□ -0.75
TPM1-210ENST00000558264 EPHA5P54756 1037 aa10.34□□□□□ -0.75
TPM1-210ENST00000558264 IMPG1Q17R60 797 aa10.34□□□□□ -0.75
TPM1-210ENST00000558264 TBCELQ5QJ74 424 aa10.34□□□□□ -0.75
TPM1-210ENST00000558264 SULT1C3Q6IMI6 304 aa10.34□□□□□ -0.75
TPM1-210ENST00000558264 NANOGP8Q6NSW7 305 aa10.34□□□□□ -0.75
TPM1-210ENST00000558264 ARPINQ7Z6K5 226 aa10.34□□□□□ -0.75
TPM1-210ENST00000558264 TRIM74Q86UV6 250 aa10.34□□□□□ -0.75
TPM1-210ENST00000558264 TICAM1Q8IUC6 712 aa10.34□□□□□ -0.75
TPM1-210ENST00000558264 ELMO1Q92556 727 aa10.34□□□□□ -0.75
TPM1-210ENST00000558264 ARMC5Q96C12 935 aa10.34□□□□□ -0.75
TPM1-210ENST00000558264 ZNF641Q96N77 438 aaPredicted RBP10.34□□□□□ -0.75
TPM1-210ENST00000558264 KCTD14Q9BQ13 255 aaPredicted RBP10.34□□□□□ -0.75
TPM1-210ENST00000558264 FAM83DQ9H4H8 585 aa10.34□□□□□ -0.75
TPM1-210ENST00000558264 ALG2Q9H553 416 aa10.34□□□□□ -0.75
TPM1-210ENST00000558264 NANOGQ9H9S0 305 aa10.34□□□□□ -0.75
TPM1-210ENST00000558264 PIDD1Q9HB75 910 aa10.34□□□□□ -0.75
TPM1-210ENST00000558264 TMCO1Q9UM00 188 aa10.34□□□□□ -0.75
TPM1-210ENST00000558264 PLXNB3Q9ULL4 1909 aa10.34□□□□□ -0.75
TPM1-210ENST00000558264 C7orf72A4D263 438 aa10.33□□□□□ -0.76
TPM1-210ENST00000558264 UPK3BL1B0FP48 263 aa10.33□□□□□ -0.76
TPM1-210ENST00000558264 UPK3BL2E5RIL1 263 aa10.33□□□□□ -0.76
TPM1-210ENST00000558264 KPNA3O00505 521 aaPredicted RBP10.33□□□□□ -0.76
TPM1-210ENST00000558264 CLGNO14967 610 aa10.33□□□□□ -0.76
TPM1-210ENST00000558264 SH3BGRLO75368 114 aa10.33□□□□□ -0.76
TPM1-210ENST00000558264 SEC22BO75396 215 aa10.33□□□□□ -0.76
TPM1-210ENST00000558264 EEDO75530 441 aaKnown RBP10.33□□□□□ -0.76
TPM1-210ENST00000558264 WDR47O94967 919 aa10.33□□□□□ -0.76
TPM1-210ENST00000558264 B3GALT4O96024 378 aa10.33□□□□□ -0.76
TPM1-210ENST00000558264 ANXA5P08758 320 aa10.33□□□□□ -0.76
TPM1-210ENST00000558264 ATP1B2P14415 290 aaPredicted RBP10.33□□□□□ -0.76
TPM1-210ENST00000558264 TIMP2P16035 220 aa10.33□□□□□ -0.76
TPM1-210ENST00000558264 EN2P19622 333 aaPredicted RBP10.33□□□□□ -0.76
TPM1-210ENST00000558264 XPAP23025 273 aaPredicted RBP10.33□□□□□ -0.76
TPM1-210ENST00000558264 AOAHP28039 575 aa10.33□□□□□ -0.76
TPM1-210ENST00000558264 GRIA2P42262 883 aa10.33□□□□□ -0.76
TPM1-210ENST00000558264 PREPP48147 710 aa10.33□□□□□ -0.76
TPM1-210ENST00000558264 TRAP1Q12931 704 aaKnown RBP10.33□□□□□ -0.76
TPM1-210ENST00000558264 PRKG2Q13237 762 aa10.33□□□□□ -0.76
TPM1-210ENST00000558264 PPIGQ13427 754 aaKnown RBP eCLIP10.33□□□□□ -0.762e-10■■□□□ 11.9
TPM1-210ENST00000558264 DHCR24Q15392 516 aa10.33□□□□□ -0.76
TPM1-210ENST00000558264 PDCD4Q53EL6 469 aaKnown RBP10.33□□□□□ -0.76
TPM1-210ENST00000558264 ADGRD2Q7Z7M1 963 aa10.33□□□□□ -0.76
TPM1-210ENST00000558264 ZFAND4Q86XD8 727 aa10.33□□□□□ -0.76
TPM1-210ENST00000558264 CACUL1Q86Y37 369 aa10.33□□□□□ -0.76
TPM1-210ENST00000558264 C7orf61Q8IZ16 206 aa10.33□□□□□ -0.76
TPM1-210ENST00000558264 RGL4Q8IZJ4 473 aa10.33□□□□□ -0.76
TPM1-210ENST00000558264 LIX1Q8N485 282 aa10.33□□□□□ -0.76
TPM1-210ENST00000558264 LMNTD1Q8N9Z9 388 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms