RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 MAN1A2O60476 641 aa11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 S100BP04271 92 aaPredicted RBP11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 CNPP09543 421 aaKnown RBP11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 OR4Q2P0C623 313 aa11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 BMP4P12644 408 aa11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 CDKN1CP49918 316 aaPredicted RBP11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 RPL38P63173 70 aaKnown RBP11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 MAD2L1Q13257 205 aaPredicted RBP11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 TUSC3Q13454 348 aa11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 ABRAXAS2Q15018 415 aa11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 PON2Q15165 354 aa11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 TRIP4Q15650 581 aaPredicted RBP11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 CTSL3PQ5NE16 218 aa11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 ALG1LQ6GMV1 187 aa11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 PLEKHG7Q6ZR37 379 aa11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 LRRC8DQ7L1W4 858 aa11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 P2RY8Q86VZ1 359 aa11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 GLB1L3Q8NCI6 653 aaPredicted RBP11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 CNIH3Q8TBE1 160 aa11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 PHF10Q8WUB8 498 aaKnown RBP11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 SUSD3Q96L08 255 aa11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 DCAF13Q9NV06 445 aaKnown RBP11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 TMEFF2Q9UIK5 374 aaPredicted RBP11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 TSC22D4Q9Y3Q8 395 aa11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 COMMD10Q9Y6G5 202 aa11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 PLXNA3P51805 1871 aa11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 OR7A17O14581 309 aa11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 AXIN1O15169 862 aa11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 OR1I1O60431 355 aa11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 CREG1O75629 220 aa11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 OTCP00480 354 aa11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 IL6P05231 212 aa11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 CTSHP09668 335 aa11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 NRIP1P48552 1158 aa11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 KPNA1P52294 538 aaPredicted RBP11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 LSM3P62310 102 aaKnown RBP11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 VAC14Q08AM6 782 aa11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 RAPSNQ13702 412 aa11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 GTF2H2Q13888 395 aa11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 NPTX1Q15818 432 aa11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 PLA2G4EQ3MJ16 856 aa11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 FAM174BQ3ZCQ3 159 aa11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 PSAPL1Q6NUJ1 521 aa11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 GTF2H2CQ6P1K8 395 aa11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 GPR149Q86SP6 731 aa11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 MIB1Q86YT6 1006 aa11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 SNX29P2Q8IUI4 249 aa11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 PIANPQ8IYJ0 282 aa11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 KCNJ9Q92806 393 aa11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 YIPF6Q96EC8 236 aa11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 REXO5Q96IC2 774 aaKnown RBP11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 CORO1BQ9BR76 489 aa11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 DPY30Q9C005 99 aa11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 KLHL25Q9H0H3 589 aa11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 IKZF5Q9H5V7 419 aa11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 PDFQ9HBH1 243 aa11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 SARS2Q9NP81 518 aaKnown RBP11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 SCN3BQ9NY72 215 aa11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 ERVK-18Q9QC07 812 aa11.61□□□□□ -0.55
VIPAS39-211ENST00000557658 PRMT5O14744 637 aaPredicted RBP11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 GPR182O15218 404 aa11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 RGS14O43566 566 aa11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 RECQL5O94762 991 aaPredicted RBP11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 FTH1P02794 183 aa11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 NTRK1P04629 796 aa11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 ITGB1P05556 798 aa11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 HMBSP08397 361 aa11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 LPOP22079 712 aaPredicted RBP11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 IGFBP5P24593 272 aa11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 PSMA3P25788 255 aa11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 MC4RP32245 332 aa11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 CLCN4P51793 760 aa11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 IRF5Q13568 498 aa11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 DNASE1L3Q13609 305 aa11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 PTGR1Q14914 329 aa11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 BCL2A1Q16548 175 aa11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 HIST2H2ACQ16777 129 aaPredicted RBP11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 DDR2Q16832 855 aa11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 RUNDC3AQ59EK9 446 aa11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 LDLRAD1Q5T700 205 aa11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 DNAJC14Q6Y2X3 702 aaPredicted RBP11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 MILR1Q7Z6M3 343 aa11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 MSRB3Q8IXL7 192 aa11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 MDGA1Q8NFP4 955 aa11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 DYNC2LI1Q8TCX1 351 aa11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 UROC1Q96N76 676 aa11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 MGME1Q9BQP7 344 aa11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 HERC2P3Q9BVR0 1158 aa11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 ASPSCR1Q9BZE9 553 aa11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 RMND5AQ9H871 391 aa11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 SLC25A37Q9NYZ2 338 aa11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 KIAA1522Q9P206 1035 aaPredicted RBP11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 DNMT3BQ9UBC3 853 aaKnown RBP11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 PCDHGA10Q9Y5H3 936 aa11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 CCL15-CCL14A0A0B4J2E2 113 aa11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 TBX18O95935 607 aa11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 SERPINA1P01009 418 aa11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 GSTT2P0CG29 244 aa11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 GSTT2BP0CG30 244 aa11.6□□□□□ -0.55
VIPAS39-211ENST00000557658 ZNF865P0CJ78 1059 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms