RNA–Protein interactions for RNA: ENST00000557514.1

TRAV33-201, Transcript of T cell receptor alpha variable 33 (pseudogene), humanhuman

BASIC

Gene TRAV33, Length 338 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV33-201ENST00000557514 CAMK4Q16566 473 aa10.01□□□□□ -0.81
TRAV33-201ENST00000557514 TUBB8Q3ZCM7 444 aa10.01□□□□□ -0.81
TRAV33-201ENST00000557514 ATP13A5Q4VNC0 1218 aa10.01□□□□□ -0.81
TRAV33-201ENST00000557514 METRNLQ641Q3 311 aa10.01□□□□□ -0.81
TRAV33-201ENST00000557514 TMC3Q7Z5M5 1100 aa10.01□□□□□ -0.81
TRAV33-201ENST00000557514 SPDYE1Q8NFV5 336 aaPredicted RBP10.01□□□□□ -0.81
TRAV33-201ENST00000557514 NINJ1Q92982 152 aa10.01□□□□□ -0.81
TRAV33-201ENST00000557514 FATE1Q969F0 183 aa10.01□□□□□ -0.81
TRAV33-201ENST00000557514 THOC3Q96J01 351 aaKnown RBP10.01□□□□□ -0.81
TRAV33-201ENST00000557514 C12orf66Q96MD2 445 aa10.01□□□□□ -0.81
TRAV33-201ENST00000557514 SPSB2Q99619 263 aa10.01□□□□□ -0.81
TRAV33-201ENST00000557514 TUBGCP2Q9BSJ2 902 aa10.01□□□□□ -0.81
TRAV33-201ENST00000557514 MRM3Q9HC36 420 aaKnown RBP10.01□□□□□ -0.81
TRAV33-201ENST00000557514 SHOC2Q9UQ13 582 aa10.01□□□□□ -0.81
TRAV33-201ENST00000557514 MEMO1Q9Y316 297 aa10.01□□□□□ -0.81
TRAV33-201ENST00000557514 FER1L5A0AVI2 2057 aa10.01□□□□□ -0.81
TRAV33-201ENST00000557514 NCOA6Q14686 2063 aaPredicted RBP10.01□□□□□ -0.81
TRAV33-201ENST00000557514 DYTNA2CJ06 578 aa10□□□□□ -0.81
TRAV33-201ENST00000557514 MAP3K7O43318 606 aa10□□□□□ -0.81
TRAV33-201ENST00000557514 HCRTR1O43613 425 aa10□□□□□ -0.81
TRAV33-201ENST00000557514 HLA-DQB2P05538 268 aa10□□□□□ -0.81
TRAV33-201ENST00000557514 MMP2P08253 660 aa10□□□□□ -0.81
TRAV33-201ENST00000557514 ITGAXP20702 1163 aa10□□□□□ -0.81
TRAV33-201ENST00000557514 IL1R2P27930 398 aa10□□□□□ -0.81
TRAV33-201ENST00000557514 NDUFS1P28331 727 aa10□□□□□ -0.81
TRAV33-201ENST00000557514 ZNF165P49910 485 aa10□□□□□ -0.81
TRAV33-201ENST00000557514 DEFB110Q30KQ9 67 aa10□□□□□ -0.81
TRAV33-201ENST00000557514 Q6ZPB1 254 aaPredicted RBP10□□□□□ -0.81
TRAV33-201ENST00000557514 TAOK1Q7L7X3 1001 aa10□□□□□ -0.81
TRAV33-201ENST00000557514 MCOLN2Q8IZK6 566 aa10□□□□□ -0.81
TRAV33-201ENST00000557514 RASGEF1AQ8N9B8 481 aa10□□□□□ -0.81
TRAV33-201ENST00000557514 OR11G2Q8NGC1 345 aa10□□□□□ -0.81
TRAV33-201ENST00000557514 OR4E2Q8NGC2 313 aa10□□□□□ -0.81
TRAV33-201ENST00000557514 DNAJB8Q8NHS0 232 aa10□□□□□ -0.81
TRAV33-201ENST00000557514 SPATA3Q8NHX4 192 aa10□□□□□ -0.81
TRAV33-201ENST00000557514 NRGNQ92686 78 aa10□□□□□ -0.81
TRAV33-201ENST00000557514 ZNF653Q96CK0 615 aa10□□□□□ -0.81
TRAV33-201ENST00000557514 MAGED4Q96JG8 741 aa10□□□□□ -0.81
TRAV33-201ENST00000557514 RMDN2Q96LZ7 410 aa10□□□□□ -0.81
TRAV33-201ENST00000557514 TRIB3Q96RU7 358 aa10□□□□□ -0.81
TRAV33-201ENST00000557514 ADGRE3Q9BY15 652 aa10□□□□□ -0.81
TRAV33-201ENST00000557514 TRIM7Q9C029 511 aa10□□□□□ -0.81
TRAV33-201ENST00000557514 ZCCHC2Q9C0B9 1178 aaKnown RBP10□□□□□ -0.81
TRAV33-201ENST00000557514 CHRNA10Q9GZZ6 450 aa10□□□□□ -0.81
TRAV33-201ENST00000557514 KLHL25Q9H0H3 589 aa10□□□□□ -0.81
TRAV33-201ENST00000557514 WWP1Q9H0M0 922 aa10□□□□□ -0.81
TRAV33-201ENST00000557514 WDR54Q9H977 334 aa10□□□□□ -0.81
TRAV33-201ENST00000557514 FAM60AQ9NP50 221 aa10□□□□□ -0.81
TRAV33-201ENST00000557514 RBM22Q9NW64 420 aaKnown RBP eCLIP10□□□□□ -0.81
TRAV33-201ENST00000557514 ZNF835Q9Y2P0 537 aa10□□□□□ -0.81
TRAV33-201ENST00000557514 ZNF711Q9Y462 761 aa10□□□□□ -0.81
TRAV33-201ENST00000557514 DNMT3AQ9Y6K1 912 aaPredicted RBP10□□□□□ -0.81
TRAV33-201ENST00000557514 AKAP6Q13023 2319 aa9.99□□□□□ -0.81
TRAV33-201ENST00000557514 C17orf113A0A1B0GUU1 675 aa9.99□□□□□ -0.81
TRAV33-201ENST00000557514 BTN3A3O00478 584 aa9.99□□□□□ -0.81
TRAV33-201ENST00000557514 BTN3A1O00481 513 aa9.99□□□□□ -0.81
TRAV33-201ENST00000557514 EPHB6O15197 1021 aa9.99□□□□□ -0.81
TRAV33-201ENST00000557514 MATN3O15232 486 aa9.99□□□□□ -0.81
TRAV33-201ENST00000557514 MFSD11O43934 449 aa9.99□□□□□ -0.81
TRAV33-201ENST00000557514 USP1O94782 785 aa9.99□□□□□ -0.81
TRAV33-201ENST00000557514 RASAL1O95294 804 aa9.99□□□□□ -0.81
TRAV33-201ENST00000557514 CTSBP07858 339 aa9.99□□□□□ -0.81
TRAV33-201ENST00000557514 PIRTP0C851 137 aa9.99□□□□□ -0.81
TRAV33-201ENST00000557514 ATXN8OSP0DMR3 200 aa9.99□□□□□ -0.81
TRAV33-201ENST00000557514 GCGRP47871 477 aa9.99□□□□□ -0.81
TRAV33-201ENST00000557514 FOLH1Q04609 750 aa9.99□□□□□ -0.81
TRAV33-201ENST00000557514 SRSF11Q05519 484 aaKnown RBP9.99□□□□□ -0.81
TRAV33-201ENST00000557514 GALNT2Q10471 571 aa9.99□□□□□ -0.81
TRAV33-201ENST00000557514 NCCRP1Q6ZVX7 275 aaPredicted RBP9.99□□□□□ -0.81
TRAV33-201ENST00000557514 BEND7Q8N7W2 519 aaPredicted RBP9.99□□□□□ -0.81
TRAV33-201ENST00000557514 C19orf47Q8N9M1 422 aaKnown RBP9.99□□□□□ -0.81
TRAV33-201ENST00000557514 DDHD1Q8NEL9 900 aa9.99□□□□□ -0.81
TRAV33-201ENST00000557514 ACVR1CQ8NER5 493 aa9.99□□□□□ -0.81
TRAV33-201ENST00000557514 GDAP1Q8TB36 358 aa9.99□□□□□ -0.81
TRAV33-201ENST00000557514 BRSK1Q8TDC3 778 aa9.99□□□□□ -0.81
TRAV33-201ENST00000557514 PHF10Q8WUB8 498 aaKnown RBP9.99□□□□□ -0.81
TRAV33-201ENST00000557514 TTC25Q96NG3 672 aa9.99□□□□□ -0.81
TRAV33-201ENST00000557514 XPO4Q9C0E2 1151 aaKnown RBP9.99□□□□□ -0.81
TRAV33-201ENST00000557514 SPRTNQ9H040 489 aaPredicted RBP9.99□□□□□ -0.81
TRAV33-201ENST00000557514 SLC26A1Q9H2B4 701 aa9.99□□□□□ -0.81
TRAV33-201ENST00000557514 SRMSQ9H3Y6 488 aa9.99□□□□□ -0.81
TRAV33-201ENST00000557514 MAGEE1Q9HCI5 957 aa9.99□□□□□ -0.81
TRAV33-201ENST00000557514 GPAMQ9HCL2 828 aa9.99□□□□□ -0.81
TRAV33-201ENST00000557514 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.99□□□□□ -0.81
TRAV33-201ENST00000557514 TXLNGQ9NUQ3 528 aa9.99□□□□□ -0.81
TRAV33-201ENST00000557514 PARVAQ9NVD7 372 aa9.99□□□□□ -0.81
TRAV33-201ENST00000557514 HAUS2Q9NVX0 235 aa9.99□□□□□ -0.81
TRAV33-201ENST00000557514 TMEM191CA6NGB0 347 aa9.98□□□□□ -0.81
TRAV33-201ENST00000557514 GPR39O43194 453 aa9.98□□□□□ -0.81
TRAV33-201ENST00000557514 PMPCBO75439 489 aa9.98□□□□□ -0.81
TRAV33-201ENST00000557514 RNF8O76064 485 aa9.98□□□□□ -0.81
TRAV33-201ENST00000557514 WISP2O76076 250 aa9.98□□□□□ -0.81
TRAV33-201ENST00000557514 ONECUT2O95948 504 aa9.98□□□□□ -0.81
TRAV33-201ENST00000557514 ALBP02768 609 aa9.98□□□□□ -0.81
TRAV33-201ENST00000557514 SLC35G4P0C7Q5 338 aa9.98□□□□□ -0.81
TRAV33-201ENST00000557514 PCK1P35558 622 aa9.98□□□□□ -0.81
TRAV33-201ENST00000557514 CD86P42081 329 aa9.98□□□□□ -0.81
TRAV33-201ENST00000557514 POLR2FP61218 127 aaKnown RBP9.98□□□□□ -0.81
TRAV33-201ENST00000557514 TMPRSS15P98073 1019 aa9.98□□□□□ -0.81
TRAV33-201ENST00000557514 CACNG1Q06432 222 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms