RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 SPATA31D1Q6ZQQ2 1576 aa3.69□□□□□ -1.82
VRK1-207ENST00000557352 SETBP1Q9Y6X0 1596 aa3.69□□□□□ -1.82
VRK1-207ENST00000557352 MYOM2P54296 1465 aa3.69□□□□□ -1.82
VRK1-207ENST00000557352 RALGAPBQ86X10 1494 aa3.69□□□□□ -1.82
VRK1-207ENST00000557352 TONSLQ96HA7 1378 aa3.69□□□□□ -1.82
VRK1-207ENST00000557352 FAM237BA0A1B0GVD1 139 aa3.69□□□□□ -1.82
VRK1-207ENST00000557352 OR6C76A6NM76 312 aa3.69□□□□□ -1.82
VRK1-207ENST00000557352 E9PQ18 207 aa3.69□□□□□ -1.82
VRK1-207ENST00000557352 TRMUO75648 421 aaKnown RBP3.69□□□□□ -1.82
VRK1-207ENST00000557352 HIST1H2ABP04908 130 aa3.69□□□□□ -1.82
VRK1-207ENST00000557352 HIST1H2ADP20671 130 aa3.69□□□□□ -1.82
VRK1-207ENST00000557352 CEACAM8P31997 349 aaPredicted RBP3.69□□□□□ -1.82
VRK1-207ENST00000557352 KRT9P35527 623 aa3.69□□□□□ -1.82
VRK1-207ENST00000557352 BSGP35613 385 aa3.69□□□□□ -1.82
VRK1-207ENST00000557352 PIK3CAP42336 1068 aa3.69□□□□□ -1.82
VRK1-207ENST00000557352 CASP6P55212 293 aa3.69□□□□□ -1.82
VRK1-207ENST00000557352 NIPAL4Q0D2K0 466 aa3.69□□□□□ -1.82
VRK1-207ENST00000557352 LRMPQ12912 555 aa3.69□□□□□ -1.82
VRK1-207ENST00000557352 ZRSR2Q15696 482 aaKnown RBP3.69□□□□□ -1.82
VRK1-207ENST00000557352 ARHGEF16Q5VV41 709 aa3.69□□□□□ -1.82
VRK1-207ENST00000557352 PWWP2BQ6NUJ5 590 aa3.69□□□□□ -1.82
VRK1-207ENST00000557352 DENND5BQ6ZUT9 1274 aa3.69□□□□□ -1.82
VRK1-207ENST00000557352 HIST3H2AQ7L7L0 130 aa3.69□□□□□ -1.82
VRK1-207ENST00000557352 ARHGAP12Q8IWW6 846 aa3.69□□□□□ -1.82
VRK1-207ENST00000557352 GPALPP1Q8IXQ4 340 aa3.69□□□□□ -1.82
VRK1-207ENST00000557352 DIS3L2Q8IYB7 885 aaKnown RBP3.69□□□□□ -1.82
VRK1-207ENST00000557352 CRYBG2Q8N1P7 616 aa3.69□□□□□ -1.82
VRK1-207ENST00000557352 AFAP1Q8N556 730 aa3.69□□□□□ -1.82
VRK1-207ENST00000557352 L3MBTL4Q8NA19 623 aa3.69□□□□□ -1.82
VRK1-207ENST00000557352 ANKRD52Q8NB46 1076 aa3.69□□□□□ -1.82
VRK1-207ENST00000557352 FGFBP3Q8TAT2 258 aa3.69□□□□□ -1.82
VRK1-207ENST00000557352 ETNPPLQ8TBG4 499 aa3.69□□□□□ -1.82
VRK1-207ENST00000557352 GRHL3Q8TE85 626 aa3.69□□□□□ -1.82
VRK1-207ENST00000557352 ZKSCAN4Q969J2 545 aaPredicted RBP3.69□□□□□ -1.82
VRK1-207ENST00000557352 TRIM51Q9BSJ1 452 aa3.69□□□□□ -1.82
VRK1-207ENST00000557352 RPS10P5Q9NQ39 176 aa3.69□□□□□ -1.82
VRK1-207ENST00000557352 DBNLQ9UJU6 430 aaKnown RBP3.69□□□□□ -1.82
VRK1-207ENST00000557352 KCNE2Q9Y6J6 123 aa3.69□□□□□ -1.82
VRK1-207ENST00000557352 TMEM131LA2VDJ0 1609 aa3.69□□□□□ -1.82
VRK1-207ENST00000557352 MYO3AQ8NEV4 1616 aa3.69□□□□□ -1.82
VRK1-207ENST00000557352 CCDC144AA2RUR9 1427 aa3.69□□□□□ -1.82
VRK1-207ENST00000557352 NOS1P29475 1434 aa3.69□□□□□ -1.82
VRK1-207ENST00000557352 SPATA31E1Q6ZUB1 1445 aa3.69□□□□□ -1.82
VRK1-207ENST00000557352 C3P01024 1663 aa3.68□□□□□ -1.82
VRK1-207ENST00000557352 ZNF142P52746 1687 aaPredicted RBP3.68□□□□□ -1.82
VRK1-207ENST00000557352 UGGT1Q9NYU2 1555 aa3.68□□□□□ -1.82
VRK1-207ENST00000557352 COL5A2P05997 1499 aaPredicted RBP3.68□□□□□ -1.82
VRK1-207ENST00000557352 NRXN1Q9ULB1 1477 aa3.68□□□□□ -1.82
VRK1-207ENST00000557352 SETD1AO15047 1707 aaKnown RBP3.68□□□□□ -1.82
VRK1-207ENST00000557352 A0A087WW49 117 aa3.68□□□□□ -1.82
VRK1-207ENST00000557352 PRR32B1ATL7 298 aa3.68□□□□□ -1.82
VRK1-207ENST00000557352 CEBPBP17676 345 aa3.68□□□□□ -1.82
VRK1-207ENST00000557352 MSH2P43246 934 aa3.68□□□□□ -1.82
VRK1-207ENST00000557352 SNRPD1P62314 119 aaKnown RBP3.68□□□□□ -1.82
VRK1-207ENST00000557352 GOLGA8DPQ0D2H9 430 aa3.68□□□□□ -1.82
VRK1-207ENST00000557352 MEP1AQ16819 746 aa3.68□□□□□ -1.82
VRK1-207ENST00000557352 GORABQ5T7V8 394 aa3.68□□□□□ -1.82
VRK1-207ENST00000557352 ZNF613Q6PF04 617 aa3.68□□□□□ -1.82
VRK1-207ENST00000557352 GLDNQ6ZMI3 551 aaPredicted RBP3.68□□□□□ -1.82
VRK1-207ENST00000557352 HACE1Q8IYU2 909 aa3.68□□□□□ -1.82
VRK1-207ENST00000557352 FRMD1Q8N878 549 aa3.68□□□□□ -1.82
VRK1-207ENST00000557352 ZNF614Q8N883 585 aa3.68□□□□□ -1.82
VRK1-207ENST00000557352 KCNG4Q8TDN1 519 aa3.68□□□□□ -1.82
VRK1-207ENST00000557352 C18orf12Q96KH6 178 aa3.68□□□□□ -1.82
VRK1-207ENST00000557352 PDCL3Q9H2J4 239 aa3.68□□□□□ -1.82
VRK1-207ENST00000557352 MYH16Q9H6N6 1097 aa3.68□□□□□ -1.82
VRK1-207ENST00000557352 UBN1Q9NPG3 1134 aa3.68□□□□□ -1.82
VRK1-207ENST00000557352 LIMA1Q9UHB6 759 aaKnown RBP3.68□□□□□ -1.82
VRK1-207ENST00000557352 NPATQ14207 1427 aa3.68□□□□□ -1.82
VRK1-207ENST00000557352 YEATS2Q9ULM3 1422 aa3.68□□□□□ -1.82
VRK1-207ENST00000557352 ADAMTSL3P82987 1691 aa3.68□□□□□ -1.82
VRK1-207ENST00000557352 KNDC1Q76NI1 1749 aa3.67□□□□□ -1.82
VRK1-207ENST00000557352 UBR1Q8IWV7 1749 aa3.67□□□□□ -1.82
VRK1-207ENST00000557352 GPRASP1Q5JY77 1395 aa3.67□□□□□ -1.82
VRK1-207ENST00000557352 IGHV4-4A0A075B6R2 117 aa3.67□□□□□ -1.82
VRK1-207ENST00000557352 IGLV9-49A0A0B4J1Y8 123 aa3.67□□□□□ -1.82
VRK1-207ENST00000557352 IGHV4-61A0A0C4DH41 118 aa3.67□□□□□ -1.82
VRK1-207ENST00000557352 TMEM8BA6NDV4 472 aa3.67□□□□□ -1.82
VRK1-207ENST00000557352 TMCC2O75069 709 aa3.67□□□□□ -1.82
VRK1-207ENST00000557352 AP2A2O94973 939 aa3.67□□□□□ -1.82
VRK1-207ENST00000557352 IGHV4-59P01825 116 aa3.67□□□□□ -1.82
VRK1-207ENST00000557352 RAF1P04049 648 aa3.67□□□□□ -1.82
VRK1-207ENST00000557352 EDN1P05305 212 aa3.67□□□□□ -1.82
VRK1-207ENST00000557352 SLC6A12P48065 614 aa3.67□□□□□ -1.82
VRK1-207ENST00000557352 GPR143P51810 404 aa3.67□□□□□ -1.82
VRK1-207ENST00000557352 GALCP54803 685 aa3.67□□□□□ -1.82
VRK1-207ENST00000557352 CDH11P55287 796 aa3.67□□□□□ -1.82
VRK1-207ENST00000557352 ZNF239Q16600 458 aaKnown RBP3.67□□□□□ -1.82
VRK1-207ENST00000557352 ZDHHC20Q5W0Z9 365 aa3.67□□□□□ -1.82
VRK1-207ENST00000557352 SLC16A9Q7RTY1 509 aa3.67□□□□□ -1.82
VRK1-207ENST00000557352 SH2D6Q7Z4S9 175 aa3.67□□□□□ -1.82
VRK1-207ENST00000557352 SMAP1Q8IYB5 467 aaPredicted RBP3.67□□□□□ -1.82
VRK1-207ENST00000557352 BMPERQ8N8U9 685 aa3.67□□□□□ -1.82
VRK1-207ENST00000557352 HJURPQ8NCD3 748 aaPredicted RBP3.67□□□□□ -1.82
VRK1-207ENST00000557352 DENND2DQ9H6A0 471 aaPredicted RBP3.67□□□□□ -1.82
VRK1-207ENST00000557352 JMJD4Q9H9V9 463 aa3.67□□□□□ -1.82
VRK1-207ENST00000557352 SLC7A10Q9NS82 523 aa3.67□□□□□ -1.82
VRK1-207ENST00000557352 MIOSQ9NXC5 875 aa3.67□□□□□ -1.82
VRK1-207ENST00000557352 ZFYVE9O95405 1425 aa3.67□□□□□ -1.82
VRK1-207ENST00000557352 NEXMIFQ5QGS0 1516 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms