RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 PTP4A2Q12974 167 aa12.05□□□□□ -0.48
PSEN1-220ENST00000557037 NFE2L1Q14494 772 aa12.05□□□□□ -0.48
PSEN1-220ENST00000557037 AMZ2Q86W34 360 aa12.05□□□□□ -0.48
PSEN1-220ENST00000557037 TAB3Q8N5C8 712 aaPredicted RBP12.05□□□□□ -0.48
PSEN1-220ENST00000557037 SIRT6Q8N6T7 355 aa12.05□□□□□ -0.48
PSEN1-220ENST00000557037 CCDC110Q8TBZ0 833 aa12.05□□□□□ -0.48
PSEN1-220ENST00000557037 BRIX1Q8TDN6 353 aaKnown RBP12.05□□□□□ -0.48
PSEN1-220ENST00000557037 HAS2Q92819 552 aa12.05□□□□□ -0.48
PSEN1-220ENST00000557037 EID2BQ96D98 161 aa12.05□□□□□ -0.48
PSEN1-220ENST00000557037 C12orf66Q96MD2 445 aa12.05□□□□□ -0.48
PSEN1-220ENST00000557037 LYSMD1Q96S90 227 aa12.05□□□□□ -0.48
PSEN1-220ENST00000557037 CNPY3Q9BT09 278 aa12.05□□□□□ -0.48
PSEN1-220ENST00000557037 ZSCAN5AQ9BUG6 496 aa12.05□□□□□ -0.48
PSEN1-220ENST00000557037 NAA15Q9BXJ9 866 aaKnown RBP12.05□□□□□ -0.48
PSEN1-220ENST00000557037 POLDIP3Q9BY77 421 aaKnown RBP12.05□□□□□ -0.48
PSEN1-220ENST00000557037 WWP1Q9H0M0 922 aa12.05□□□□□ -0.48
PSEN1-220ENST00000557037 SOX17Q9H6I2 414 aaPredicted RBP12.05□□□□□ -0.48
PSEN1-220ENST00000557037 COQ3Q9NZJ6 369 aa12.05□□□□□ -0.48
PSEN1-220ENST00000557037 PCSK1NQ9UHG2 260 aa12.05□□□□□ -0.48
PSEN1-220ENST00000557037 ADAM21Q9UKJ8 722 aa12.05□□□□□ -0.48
PSEN1-220ENST00000557037 SONP18583 2426 aaKnown RBP12.04□□□□□ -0.48
PSEN1-220ENST00000557037 ADAM10O14672 748 aa12.04□□□□□ -0.48
PSEN1-220ENST00000557037 GADD45BO75293 160 aaPredicted RBP12.04□□□□□ -0.48
PSEN1-220ENST00000557037 PMPCBO75439 489 aa12.04□□□□□ -0.48
PSEN1-220ENST00000557037 WDPCPO95876 746 aa12.04□□□□□ -0.48
PSEN1-220ENST00000557037 CYP1A1P04798 512 aaPredicted RBP12.04□□□□□ -0.48
PSEN1-220ENST00000557037 UQCRHP07919 91 aa12.04□□□□□ -0.48
PSEN1-220ENST00000557037 PYGMP11217 842 aa12.04□□□□□ -0.48
PSEN1-220ENST00000557037 ABOP16442 354 aa12.04□□□□□ -0.48
PSEN1-220ENST00000557037 CHRNB2P17787 502 aa12.04□□□□□ -0.48
PSEN1-220ENST00000557037 ALAS2P22557 587 aa12.04□□□□□ -0.48
PSEN1-220ENST00000557037 GTF2H3Q13889 308 aa12.04□□□□□ -0.48
PSEN1-220ENST00000557037 QPCTQ16769 361 aa12.04□□□□□ -0.48
PSEN1-220ENST00000557037 DOLPP1Q86YN1 238 aa12.04□□□□□ -0.48
PSEN1-220ENST00000557037 ATPAF2Q8N5M1 289 aa12.04□□□□□ -0.48
PSEN1-220ENST00000557037 TRAM1L1Q8N609 369 aa12.04□□□□□ -0.48
PSEN1-220ENST00000557037 ACRBPQ8NEB7 543 aa12.04□□□□□ -0.48
PSEN1-220ENST00000557037 SPDYE1Q8NFV5 336 aaPredicted RBP12.04□□□□□ -0.48
PSEN1-220ENST00000557037 GDAP1Q8TB36 358 aa12.04□□□□□ -0.48
PSEN1-220ENST00000557037 PHF10Q8WUB8 498 aaKnown RBP12.04□□□□□ -0.48
PSEN1-220ENST00000557037 NACC2Q96BF6 587 aa12.04□□□□□ -0.48
PSEN1-220ENST00000557037 MCEEQ96PE7 176 aa12.04□□□□□ -0.48
PSEN1-220ENST00000557037 DMRTA2Q96SC8 542 aa12.04□□□□□ -0.48
PSEN1-220ENST00000557037 TDRD1Q9BXT4 1180 aaKnown RBP12.04□□□□□ -0.48
PSEN1-220ENST00000557037 KIR3DX1Q9H7L2 352 aa12.04□□□□□ -0.48
PSEN1-220ENST00000557037 PCDH9Q9HC56 1237 aa12.04□□□□□ -0.48
PSEN1-220ENST00000557037 FAM60AQ9NP50 221 aa12.04□□□□□ -0.48
PSEN1-220ENST00000557037 ETNK2Q9NVF9 386 aa12.04□□□□□ -0.48
PSEN1-220ENST00000557037 IRAK4Q9NWZ3 460 aa12.04□□□□□ -0.48
PSEN1-220ENST00000557037 ADAM22Q9P0K1 906 aa12.04□□□□□ -0.48
PSEN1-220ENST00000557037 MAN1B1Q9UKM7 699 aa12.04□□□□□ -0.48
PSEN1-220ENST00000557037 TMPRSS11EQ9UL52 423 aa12.04□□□□□ -0.48
PSEN1-220ENST00000557037 TTLL3Q9Y4R7 772 aa12.04□□□□□ -0.48
PSEN1-220ENST00000557037 GTPBP10A4D1E9 387 aaKnown RBP12.03□□□□□ -0.48
PSEN1-220ENST00000557037 ANKRD62A6NC57 917 aa12.03□□□□□ -0.48
PSEN1-220ENST00000557037 SIGLEC16A6NMB1 481 aa12.03□□□□□ -0.48
PSEN1-220ENST00000557037 RNF212BA8MTL3 300 aa12.03□□□□□ -0.48
PSEN1-220ENST00000557037 NPIPA5E9PKD4 350 aa12.03□□□□□ -0.48
PSEN1-220ENST00000557037 H3BMH7 237 aa12.03□□□□□ -0.48
PSEN1-220ENST00000557037 BTN3A3O00478 584 aa12.03□□□□□ -0.48
PSEN1-220ENST00000557037 BTN3A1O00481 513 aa12.03□□□□□ -0.48
PSEN1-220ENST00000557037 ZSCAN9O15535 394 aaPredicted RBP12.03□□□□□ -0.48
PSEN1-220ENST00000557037 USP1O94782 785 aa12.03□□□□□ -0.48
PSEN1-220ENST00000557037 PRAMEF1O95521 474 aa12.03□□□□□ -0.48
PSEN1-220ENST00000557037 ITGAXP20702 1163 aa12.03□□□□□ -0.48
PSEN1-220ENST00000557037 FMO1Q01740 532 aa12.03□□□□□ -0.48
PSEN1-220ENST00000557037 OGDHQ02218 1023 aa12.03□□□□□ -0.48
PSEN1-220ENST00000557037 TFF3Q07654 80 aa12.03□□□□□ -0.48
PSEN1-220ENST00000557037 TMEM115Q12893 351 aaPredicted RBP12.03□□□□□ -0.48
PSEN1-220ENST00000557037 OLIG2Q13516 323 aa12.03□□□□□ -0.48
PSEN1-220ENST00000557037 DPYSQ14117 519 aa12.03□□□□□ -0.48
PSEN1-220ENST00000557037 NKG7Q16617 165 aa12.03□□□□□ -0.48
PSEN1-220ENST00000557037 SMYD5Q6GMV2 418 aa12.03□□□□□ -0.48
PSEN1-220ENST00000557037 DPY19L2P1Q6NXN4 242 aa12.03□□□□□ -0.48
PSEN1-220ENST00000557037 DNAJC24Q6P3W2 148 aa12.03□□□□□ -0.48
PSEN1-220ENST00000557037 CEP128Q6ZU80 1094 aa12.03□□□□□ -0.48
PSEN1-220ENST00000557037 TRIM73Q86UV7 250 aa12.03□□□□□ -0.48
PSEN1-220ENST00000557037 KBTBD2Q8IY47 623 aa12.03□□□□□ -0.48
PSEN1-220ENST00000557037 SUN3Q8TAQ9 357 aa12.03□□□□□ -0.48
PSEN1-220ENST00000557037 THAP3Q8WTV1 239 aaPredicted RBP12.03□□□□□ -0.48
PSEN1-220ENST00000557037 PSMF1Q92530 271 aa12.03□□□□□ -0.48
PSEN1-220ENST00000557037 RMND5BQ96G75 393 aaPredicted RBP12.03□□□□□ -0.48
PSEN1-220ENST00000557037 GPR137Q96N19 417 aa12.03□□□□□ -0.48
PSEN1-220ENST00000557037 PWWP2AQ96N64 755 aa12.03□□□□□ -0.48
PSEN1-220ENST00000557037 PEBP4Q96S96 227 aa12.03□□□□□ -0.48
PSEN1-220ENST00000557037 SNRNP25Q9BV90 132 aaKnown RBP12.03□□□□□ -0.48
PSEN1-220ENST00000557037 PITPNM3Q9BZ71 974 aa12.03□□□□□ -0.48
PSEN1-220ENST00000557037 SRMSQ9H3Y6 488 aa12.03□□□□□ -0.48
PSEN1-220ENST00000557037 CLSTN2Q9H4D0 955 aa12.03□□□□□ -0.48
PSEN1-220ENST00000557037 ZNF395Q9H8N7 513 aaPredicted RBP12.03□□□□□ -0.48
PSEN1-220ENST00000557037 ZFYVE1Q9HBF4 777 aa12.03□□□□□ -0.48
PSEN1-220ENST00000557037 CWC15Q9P013 229 aaKnown RBP12.03□□□□□ -0.48
PSEN1-220ENST00000557037 LRFN1Q9P244 771 aa12.03□□□□□ -0.48
PSEN1-220ENST00000557037 FAM8A1Q9UBU6 413 aa12.03□□□□□ -0.48
PSEN1-220ENST00000557037 NOCTQ9UK39 431 aaKnown RBP12.03□□□□□ -0.48
PSEN1-220ENST00000557037 NPIPA1Q9UND3 350 aa12.03□□□□□ -0.48
PSEN1-220ENST00000557037 SHOC2Q9UQ13 582 aa12.03□□□□□ -0.48
PSEN1-220ENST00000557037 MRPS2Q9Y399 296 aaKnown RBP12.03□□□□□ -0.48
PSEN1-220ENST00000557037 E9PLN8 166 aa12.02□□□□□ -0.49
PSEN1-220ENST00000557037 CTAG2O75638 210 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms