RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 CSO75390 466 aaKnown RBP17.05■□□□□ 0.32
SHMT2-225ENST00000556798 SLCO2B1O94956 709 aa17.05■□□□□ 0.32
SHMT2-225ENST00000556798 JUPP14923 745 aa17.05■□□□□ 0.32
SHMT2-225ENST00000556798 PDX1P52945 283 aa17.05■□□□□ 0.32
SHMT2-225ENST00000556798 ABRQ12979 859 aa17.05■□□□□ 0.32
SHMT2-225ENST00000556798 PLCL1Q15111 1095 aa17.05■□□□□ 0.32
SHMT2-225ENST00000556798 ACSBG2Q5FVE4 666 aa17.05■□□□□ 0.32
SHMT2-225ENST00000556798 PLEKHS1Q5SXH7 462 aa17.05■□□□□ 0.32
SHMT2-225ENST00000556798 CEP128Q6ZU80 1094 aa17.05■□□□□ 0.32
SHMT2-225ENST00000556798 B3GNT8Q7Z7M8 397 aa17.05■□□□□ 0.32
SHMT2-225ENST00000556798 PIM3Q86V86 326 aa17.05■□□□□ 0.32
SHMT2-225ENST00000556798 TMPRSS12Q86WS5 348 aa17.05■□□□□ 0.32
SHMT2-225ENST00000556798 RBM12BQ8IXT5 1001 aaKnown RBP17.05■□□□□ 0.32
SHMT2-225ENST00000556798 GALNT15Q8N3T1 639 aa17.05■□□□□ 0.32
SHMT2-225ENST00000556798 OR5AR1Q8NGP9 310 aa17.05■□□□□ 0.32
SHMT2-225ENST00000556798 OR10G6Q8NH81 332 aa17.05■□□□□ 0.32
SHMT2-225ENST00000556798 CFAP61Q8NHU2 1237 aa17.05■□□□□ 0.32
SHMT2-225ENST00000556798 WDR48Q8TAF3 677 aa17.05■□□□□ 0.32
SHMT2-225ENST00000556798 SKA2Q8WVK7 121 aaPredicted RBP17.05■□□□□ 0.32
SHMT2-225ENST00000556798 CDKL2Q92772 493 aa17.05■□□□□ 0.32
SHMT2-225ENST00000556798 KCNJ9Q92806 393 aa17.05■□□□□ 0.32
SHMT2-225ENST00000556798 AHCYL2Q96HN2 611 aaKnown RBP17.05■□□□□ 0.32
SHMT2-225ENST00000556798 NRTNQ99748 197 aa17.05■□□□□ 0.32
SHMT2-225ENST00000556798 UCK1Q9HA47 277 aa17.05■□□□□ 0.32
SHMT2-225ENST00000556798 ASF1AQ9Y294 204 aa17.05■□□□□ 0.32
SHMT2-225ENST00000556798 HEBP2Q9Y5Z4 205 aa17.05■□□□□ 0.32
SHMT2-225ENST00000556798 COMMD10Q9Y6G5 202 aa17.05■□□□□ 0.32
SHMT2-225ENST00000556798 AKAP13Q12802 2813 aa17.04■□□□□ 0.32
SHMT2-225ENST00000556798 FAM159BA6NKW6 160 aa17.04■□□□□ 0.32
SHMT2-225ENST00000556798 ZW10O43264 779 aa17.04■□□□□ 0.32
SHMT2-225ENST00000556798 DUX1O43812 170 aa17.04■□□□□ 0.32
SHMT2-225ENST00000556798 VPS26AO75436 327 aa17.04■□□□□ 0.32
SHMT2-225ENST00000556798 SPAG6O75602 509 aa17.04■□□□□ 0.32
SHMT2-225ENST00000556798 SNRNP200O75643 2136 aaKnown RBP17.04■□□□□ 0.32
SHMT2-225ENST00000556798 TCEA3O75764 348 aa17.04■□□□□ 0.32
SHMT2-225ENST00000556798 ACSL3O95573 720 aa17.04■□□□□ 0.32
SHMT2-225ENST00000556798 CPNE6O95741 557 aa17.04■□□□□ 0.32
SHMT2-225ENST00000556798 MYBL2P10244 700 aa17.04■□□□□ 0.32
SHMT2-225ENST00000556798 MPSTP25325 297 aa17.04■□□□□ 0.32
SHMT2-225ENST00000556798 STX2P32856 288 aa17.04■□□□□ 0.32
SHMT2-225ENST00000556798 PGGT1BP53609 377 aa17.04■□□□□ 0.32
SHMT2-225ENST00000556798 EPHA4P54764 986 aa17.04■□□□□ 0.32
SHMT2-225ENST00000556798 CDKN2DP55273 166 aa17.04■□□□□ 0.32
SHMT2-225ENST00000556798 GPLD1P80108 840 aa17.04■□□□□ 0.32
SHMT2-225ENST00000556798 TIAL1Q01085 375 aaKnown RBP eCLIP17.04■□□□□ 0.32
SHMT2-225ENST00000556798 CFHR1Q03591 330 aa17.04■□□□□ 0.32
SHMT2-225ENST00000556798 TARDBPQ13148 414 aaKnown RBP eCLIP17.04■□□□□ 0.32
SHMT2-225ENST00000556798 PRKG2Q13237 762 aa17.04■□□□□ 0.32
SHMT2-225ENST00000556798 KBTBD12Q3ZCT8 623 aa17.04■□□□□ 0.32
SHMT2-225ENST00000556798 SLC26A11Q86WA9 606 aa17.04■□□□□ 0.32
SHMT2-225ENST00000556798 RELL1Q8IUW5 271 aa17.04■□□□□ 0.32
SHMT2-225ENST00000556798 CTAGE3PQ8IX95 158 aa17.04■□□□□ 0.32
SHMT2-225ENST00000556798 DCBLD1Q8N8Z6 715 aa17.04■□□□□ 0.32
SHMT2-225ENST00000556798 CD200R1Q8TD46 325 aa17.04■□□□□ 0.32
SHMT2-225ENST00000556798 RSC1A1Q92681 617 aa17.04■□□□□ 0.32
SHMT2-225ENST00000556798 DEPDC7Q96QD5 511 aa17.04■□□□□ 0.32
SHMT2-225ENST00000556798 TSPYL1Q9H0U9 437 aa17.04■□□□□ 0.32
SHMT2-225ENST00000556798 KIR3DX1Q9H7L2 352 aa17.04■□□□□ 0.32
SHMT2-225ENST00000556798 ANKZF1Q9H8Y5 726 aa17.04■□□□□ 0.32
SHMT2-225ENST00000556798 NSMCE4AQ9NXX6 385 aa17.04■□□□□ 0.32
SHMT2-225ENST00000556798 OGFRQ9NZT2 677 aa17.04■□□□□ 0.32
SHMT2-225ENST00000556798 TMEM9Q9P0T7 183 aa17.04■□□□□ 0.32
SHMT2-225ENST00000556798 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.04■□□□□ 0.32
SHMT2-225ENST00000556798 SLC24A2Q9UI40 661 aa17.04■□□□□ 0.32
SHMT2-225ENST00000556798 COLEC10Q9Y6Z7 277 aa17.04■□□□□ 0.32
SHMT2-225ENST00000556798 V9GYY5 206 aaPredicted RBP17.04■□□□□ 0.32
SHMT2-225ENST00000556798 ADAMTS20P59510 1910 aa17.04■□□□□ 0.32
SHMT2-225ENST00000556798 AGRPO00253 132 aa17.03■□□□□ 0.32
SHMT2-225ENST00000556798 UBXN7O94888 489 aa17.03■□□□□ 0.32
SHMT2-225ENST00000556798 PROS1P07225 676 aa17.03■□□□□ 0.32
SHMT2-225ENST00000556798 FAM153BP0C7A2 387 aa17.03■□□□□ 0.32
SHMT2-225ENST00000556798 HOXB3P14651 431 aaPredicted RBP17.03■□□□□ 0.32
SHMT2-225ENST00000556798 GBX1Q14549 363 aa17.03■□□□□ 0.32
SHMT2-225ENST00000556798 ISXQ2M1V0 245 aa17.03■□□□□ 0.32
SHMT2-225ENST00000556798 FAM153CQ494X1 144 aa17.03■□□□□ 0.32
SHMT2-225ENST00000556798 HECTD2Q5U5R9 776 aa17.03■□□□□ 0.32
SHMT2-225ENST00000556798 ZC3HC1Q86WB0 502 aaKnown RBP17.03■□□□□ 0.32
SHMT2-225ENST00000556798 CPNE9Q8IYJ1 553 aa17.03■□□□□ 0.32
SHMT2-225ENST00000556798 PPM1NQ8N819 430 aa17.03■□□□□ 0.32
SHMT2-225ENST00000556798 ACVR1CQ8NER5 493 aa17.03■□□□□ 0.32
SHMT2-225ENST00000556798 NCSTNQ92542 709 aa17.03■□□□□ 0.32
SHMT2-225ENST00000556798 OLFM1Q99784 485 aa17.03■□□□□ 0.32
SHMT2-225ENST00000556798 TRIT1Q9H3H1 467 aaKnown RBP17.03■□□□□ 0.32
SHMT2-225ENST00000556798 SEMA6CQ9H3T2 930 aa17.03■□□□□ 0.32
SHMT2-225ENST00000556798 MVB12BQ9H7P6 319 aa17.03■□□□□ 0.32
SHMT2-225ENST00000556798 LATS2Q9NRM7 1088 aa17.03■□□□□ 0.32
SHMT2-225ENST00000556798 CIDEBQ9UHD4 219 aa17.03■□□□□ 0.32
SHMT2-225ENST00000556798 TRMT6Q9UJA5 497 aaKnown RBP17.03■□□□□ 0.32
SHMT2-225ENST00000556798 TDRKHQ9Y2W6 561 aaKnown RBP17.03■□□□□ 0.32
SHMT2-225ENST00000556798 NFS1Q9Y697 457 aa17.03■□□□□ 0.32
SHMT2-225ENST00000556798 FAM95CA0A1B0GW59 222 aa17.02■□□□□ 0.32
SHMT2-225ENST00000556798 AMD1P17707 334 aa17.02■□□□□ 0.32
SHMT2-225ENST00000556798 SAT1P21673 171 aa17.02■□□□□ 0.32
SHMT2-225ENST00000556798 MCM3P25205 808 aa17.02■□□□□ 0.32
SHMT2-225ENST00000556798 NDUFS1P28331 727 aa17.02■□□□□ 0.32
SHMT2-225ENST00000556798 BDKRB1P46663 353 aa17.02■□□□□ 0.32
SHMT2-225ENST00000556798 TTLL9Q3SXZ7 439 aa17.02■□□□□ 0.32
SHMT2-225ENST00000556798 ZNF574Q6ZN55 896 aaPredicted RBP17.02■□□□□ 0.32
SHMT2-225ENST00000556798 CYS1Q717R9 158 aa17.02■□□□□ 0.32
SHMT2-225ENST00000556798 OR52E1Q8NGJ3 308 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms