RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 CD180Q99467 661 aa7.16□□□□□ -1.26
SCFD1-222ENST00000556768 CTRCQ99895 268 aa7.16□□□□□ -1.26
SCFD1-222ENST00000556768 TRIM56Q9BRZ2 755 aaKnown RBP7.16□□□□□ -1.26
SCFD1-222ENST00000556768 ULBP3Q9BZM4 244 aa7.16□□□□□ -1.26
SCFD1-222ENST00000556768 RAB33BQ9H082 229 aa7.16□□□□□ -1.26
SCFD1-222ENST00000556768 GPN2Q9H9Y4 310 aaPredicted RBP7.16□□□□□ -1.26
SCFD1-222ENST00000556768 LZTFL1Q9NQ48 299 aa7.16□□□□□ -1.26
SCFD1-222ENST00000556768 NLE1Q9NVX2 485 aaPredicted RBP7.16□□□□□ -1.26
SCFD1-222ENST00000556768 HRASLS2Q9NWW9 162 aa7.16□□□□□ -1.26
SCFD1-222ENST00000556768 SMARCAL1Q9NZC9 954 aa7.16□□□□□ -1.26
SCFD1-222ENST00000556768 ANAPC5Q9UJX4 755 aa7.16□□□□□ -1.26
SCFD1-222ENST00000556768 PILRAQ9UKJ1 303 aa7.16□□□□□ -1.26
SCFD1-222ENST00000556768 WDR37Q9Y2I8 494 aa7.16□□□□□ -1.26
SCFD1-222ENST00000556768 KCTD3Q9Y597 815 aa7.16□□□□□ -1.26
SCFD1-222ENST00000556768 CAPN6Q9Y6Q1 641 aa7.16□□□□□ -1.26
SCFD1-222ENST00000556768 MN1Q10571 1320 aaPredicted RBP7.16□□□□□ -1.26
SCFD1-222ENST00000556768 TP53BP1Q12888 1972 aaPredicted RBP7.16□□□□□ -1.26
SCFD1-222ENST00000556768 HEATR9A2RTY3 570 aa7.15□□□□□ -1.26
SCFD1-222ENST00000556768 AGAP14A8MT82 685 aa7.15□□□□□ -1.26
SCFD1-222ENST00000556768 H7C0S8 307 aa7.15□□□□□ -1.26
SCFD1-222ENST00000556768 MATN2O00339 956 aa7.15□□□□□ -1.26
SCFD1-222ENST00000556768 LDB2O43679 373 aa7.15□□□□□ -1.26
SCFD1-222ENST00000556768 LIASO43766 372 aa7.15□□□□□ -1.26
SCFD1-222ENST00000556768 KDM1AO60341 852 aa7.15□□□□□ -1.26
SCFD1-222ENST00000556768 STK17BO94768 372 aa7.15□□□□□ -1.26
SCFD1-222ENST00000556768 AP2A2O94973 939 aa7.15□□□□□ -1.26
SCFD1-222ENST00000556768 METTL18O95568 372 aa7.15□□□□□ -1.26
SCFD1-222ENST00000556768 MT-ND3P03897 115 aa7.15□□□□□ -1.26
SCFD1-222ENST00000556768 APRTP07741 180 aa7.15□□□□□ -1.26
SCFD1-222ENST00000556768 MTHFD1P11586 935 aaKnown RBP7.15□□□□□ -1.26
SCFD1-222ENST00000556768 ACRV1P26436 265 aa7.15□□□□□ -1.26
SCFD1-222ENST00000556768 ZNF140P52738 457 aaPredicted RBP7.15□□□□□ -1.26
SCFD1-222ENST00000556768 GFERP55789 205 aa7.15□□□□□ -1.26
SCFD1-222ENST00000556768 XIAPP98170 497 aa7.15□□□□□ -1.26
SCFD1-222ENST00000556768 PLOD1Q02809 727 aaPredicted RBP7.15□□□□□ -1.26
SCFD1-222ENST00000556768 ACY1Q03154 408 aa7.15□□□□□ -1.26
SCFD1-222ENST00000556768 ABHD18Q0P651 414 aa7.15□□□□□ -1.26
SCFD1-222ENST00000556768 RPA4Q13156 261 aa7.15□□□□□ -1.26
SCFD1-222ENST00000556768 DNTTIP2Q5QJE6 756 aaKnown RBP7.15□□□□□ -1.26
SCFD1-222ENST00000556768 TMTC4Q5T4D3 741 aa7.15□□□□□ -1.26
SCFD1-222ENST00000556768 KCTD11Q693B1 232 aa7.15□□□□□ -1.26
SCFD1-222ENST00000556768 DENND5AQ6IQ26 1287 aa7.15□□□□□ -1.26
SCFD1-222ENST00000556768 FAM92BQ6ZTR7 304 aa7.15□□□□□ -1.26
SCFD1-222ENST00000556768 HOOK3Q86VS8 718 aa7.15□□□□□ -1.26
SCFD1-222ENST00000556768 SERPINA9Q86WD7 417 aa7.15□□□□□ -1.26
SCFD1-222ENST00000556768 PPP1R3BQ86XI6 285 aa7.15□□□□□ -1.26
SCFD1-222ENST00000556768 SLC13A5Q86YT5 568 aaPredicted RBP7.15□□□□□ -1.26
SCFD1-222ENST00000556768 TAB3Q8N5C8 712 aaPredicted RBP7.15□□□□□ -1.26
SCFD1-222ENST00000556768 BMPERQ8N8U9 685 aa7.15□□□□□ -1.26
SCFD1-222ENST00000556768 SIDT2Q8NBJ9 832 aaKnown RBP7.15□□□□□ -1.26
SCFD1-222ENST00000556768 HM13Q8TCT9 377 aa7.15□□□□□ -1.26
SCFD1-222ENST00000556768 STAMBPL1Q96FJ0 436 aa7.15□□□□□ -1.26
SCFD1-222ENST00000556768 CDKN2AIPNLQ96HQ2 116 aa7.15□□□□□ -1.26
SCFD1-222ENST00000556768 DNAJC1Q96KC8 554 aaKnown RBP7.15□□□□□ -1.26
SCFD1-222ENST00000556768 CATSPER2Q96P56 530 aa7.15□□□□□ -1.26
SCFD1-222ENST00000556768 OR6C1Q96RD1 312 aa7.15□□□□□ -1.26
SCFD1-222ENST00000556768 GORASP1Q9BQQ3 440 aa7.15□□□□□ -1.26
SCFD1-222ENST00000556768 TSSK1BQ9BXA7 367 aa7.15□□□□□ -1.26
SCFD1-222ENST00000556768 WWP1Q9H0M0 922 aa7.15□□□□□ -1.26
SCFD1-222ENST00000556768 ZNF768Q9H5H4 540 aaKnown RBP7.15□□□□□ -1.26
SCFD1-222ENST00000556768 FAM96AQ9H5X1 160 aa7.15□□□□□ -1.26
SCFD1-222ENST00000556768 PAK5Q9P286 719 aa7.15□□□□□ -1.26
SCFD1-222ENST00000556768 ZKSCAN5Q9Y2L8 839 aa7.15□□□□□ -1.26
SCFD1-222ENST00000556768 CFAP20Q9Y6A4 193 aaKnown RBP7.15□□□□□ -1.26
SCFD1-222ENST00000556768 ADAMTS20P59510 1910 aa7.15□□□□□ -1.26
SCFD1-222ENST00000556768 SHROOM3Q8TF72 1996 aa7.15□□□□□ -1.27
SCFD1-222ENST00000556768 PRR19A6NJB7 356 aa7.15□□□□□ -1.27
SCFD1-222ENST00000556768 ZNF891A8MT65 544 aaPredicted RBP7.15□□□□□ -1.27
SCFD1-222ENST00000556768 GAPDHSO14556 408 aaPredicted RBP7.15□□□□□ -1.27
SCFD1-222ENST00000556768 FTH1P02794 183 aa7.15□□□□□ -1.27
SCFD1-222ENST00000556768 PRB1P04280 392 aa7.15□□□□□ -1.27
SCFD1-222ENST00000556768 OR56A5P0C7T3 313 aa7.15□□□□□ -1.27
SCFD1-222ENST00000556768 NELFEP18615 380 aaKnown RBP7.15□□□□□ -1.27
SCFD1-222ENST00000556768 MSNP26038 577 aaKnown RBP7.15□□□□□ -1.27
SCFD1-222ENST00000556768 CD151P48509 253 aa7.15□□□□□ -1.27
SCFD1-222ENST00000556768 PRLHRP49683 370 aa7.15□□□□□ -1.27
SCFD1-222ENST00000556768 WDR4P57081 412 aaKnown RBP7.15□□□□□ -1.27
SCFD1-222ENST00000556768 PRAMEP78395 509 aa7.15□□□□□ -1.27
SCFD1-222ENST00000556768 HSD11B2P80365 405 aa7.15□□□□□ -1.27
SCFD1-222ENST00000556768 SARNPP82979 210 aaKnown RBP7.15□□□□□ -1.27
SCFD1-222ENST00000556768 SNX1Q13596 522 aa7.15□□□□□ -1.27
SCFD1-222ENST00000556768 LY6DQ14210 128 aa7.15□□□□□ -1.27
SCFD1-222ENST00000556768 CCNG2Q16589 344 aa7.15□□□□□ -1.27
SCFD1-222ENST00000556768 AARS2Q5JTZ9 985 aaKnown RBP7.15□□□□□ -1.27
SCFD1-222ENST00000556768 RNF187Q5TA31 235 aaPredicted RBP7.15□□□□□ -1.27
SCFD1-222ENST00000556768 BORAQ6PGQ7 559 aa7.15□□□□□ -1.27
SCFD1-222ENST00000556768 C6orf15Q6UXA7 325 aaPredicted RBP7.15□□□□□ -1.27
SCFD1-222ENST00000556768 CERS6Q6ZMG9 384 aa7.15□□□□□ -1.27
SCFD1-222ENST00000556768 FAM83HQ6ZRV2 1179 aaPredicted RBP7.15□□□□□ -1.27
SCFD1-222ENST00000556768 PRSS42Q7Z5A4 293 aa7.15□□□□□ -1.27
SCFD1-222ENST00000556768 KMT5CQ86Y97 462 aa7.15□□□□□ -1.27
SCFD1-222ENST00000556768 LRRC8AQ8IWT6 810 aa7.15□□□□□ -1.27
SCFD1-222ENST00000556768 CARFQ8N187 725 aa7.15□□□□□ -1.27
SCFD1-222ENST00000556768 ACVR1CQ8NER5 493 aa7.15□□□□□ -1.27
SCFD1-222ENST00000556768 OR6P1Q8NGX9 317 aa7.15□□□□□ -1.27
SCFD1-222ENST00000556768 GSDMBQ8TAX9 411 aa7.15□□□□□ -1.27
SCFD1-222ENST00000556768 C1orf54Q8WWF1 131 aa7.15□□□□□ -1.27
SCFD1-222ENST00000556768 LCN9Q8WX39 176 aa7.15□□□□□ -1.27
SCFD1-222ENST00000556768 ATG4AQ8WYN0 398 aa7.15□□□□□ -1.27
SCFD1-222ENST00000556768 RSC1A1Q92681 617 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms