RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 GDF15Q99988 308 aa17.93■□□□□ 0.46
SDR39U1-220ENST00000556548 P2RY13Q9BPV8 354 aa17.93■□□□□ 0.46
SDR39U1-220ENST00000556548 RDH14Q9HBH5 336 aa17.93■□□□□ 0.46
SDR39U1-220ENST00000556548 PARVBQ9HBI1 364 aa17.93■□□□□ 0.46
SDR39U1-220ENST00000556548 CCDC85CA6NKD9 419 aa17.93■□□□□ 0.46
SDR39U1-220ENST00000556548 K7EPI3 171 aa17.93■□□□□ 0.46
SDR39U1-220ENST00000556548 NUAK1O60285 661 aa17.93■□□□□ 0.46
SDR39U1-220ENST00000556548 STK16O75716 305 aa17.93■□□□□ 0.46
SDR39U1-220ENST00000556548 TCN1P20061 433 aaPredicted RBP17.93■□□□□ 0.46
SDR39U1-220ENST00000556548 PTDSS1P48651 473 aaKnown RBP17.93■□□□□ 0.46
SDR39U1-220ENST00000556548 THOP1P52888 689 aa17.93■□□□□ 0.46
SDR39U1-220ENST00000556548 SEC13P55735 322 aa17.93■□□□□ 0.46
SDR39U1-220ENST00000556548 STX5Q13190 355 aa17.93■□□□□ 0.46
SDR39U1-220ENST00000556548 GBX1Q14549 363 aa17.93■□□□□ 0.46
SDR39U1-220ENST00000556548 MAPRE2Q15555 327 aa17.93■□□□□ 0.46
SDR39U1-220ENST00000556548 VPS26BQ4G0F5 336 aa17.93■□□□□ 0.46
SDR39U1-220ENST00000556548 SGO1Q5FBB7 561 aa17.93■□□□□ 0.46
SDR39U1-220ENST00000556548 XKR7Q5GH72 579 aa17.93■□□□□ 0.46
SDR39U1-220ENST00000556548 HABP4Q5JVS0 413 aaKnown RBP17.93■□□□□ 0.46
SDR39U1-220ENST00000556548 LDLRAP1Q5SW96 308 aa17.93■□□□□ 0.46
SDR39U1-220ENST00000556548 RAET1GQ6H3X3 334 aa17.93■□□□□ 0.46
SDR39U1-220ENST00000556548 Q6ZSR9 355 aa17.93■□□□□ 0.46
SDR39U1-220ENST00000556548 PGAM4Q8N0Y7 254 aa17.93■□□□□ 0.46
SDR39U1-220ENST00000556548 FAM156AQ8NDB6 213 aa17.93■□□□□ 0.46
SDR39U1-220ENST00000556548 PYDC1Q8WXC3 89 aa17.93■□□□□ 0.46
SDR39U1-220ENST00000556548 PPP1R16AQ96I34 528 aa17.93■□□□□ 0.46
SDR39U1-220ENST00000556548 KLHL42Q9P2K6 505 aa17.93■□□□□ 0.46
SDR39U1-220ENST00000556548 THAP10Q9P2Z0 257 aaPredicted RBP17.93■□□□□ 0.46
SDR39U1-220ENST00000556548 ZNHIT2Q9UHR6 403 aa17.93■□□□□ 0.46
SDR39U1-220ENST00000556548 RNF11Q9Y3C5 154 aa17.93■□□□□ 0.46
SDR39U1-220ENST00000556548 DOCK8Q8NF50 2099 aa17.93■□□□□ 0.46
SDR39U1-220ENST00000556548 KIF26AQ9ULI4 1882 aaPredicted RBP17.93■□□□□ 0.46
SDR39U1-220ENST00000556548 COL4A3Q01955 1670 aa17.92■□□□□ 0.46
SDR39U1-220ENST00000556548 AREL1O15033 823 aa17.92■□□□□ 0.46
SDR39U1-220ENST00000556548 FTH1P02794 183 aa17.92■□□□□ 0.46
SDR39U1-220ENST00000556548 HIST1H2AGP0C0S8 130 aaPredicted RBP17.92■□□□□ 0.46
SDR39U1-220ENST00000556548 HIST1H2ADP20671 130 aa17.92■□□□□ 0.46
SDR39U1-220ENST00000556548 HMOX2P30519 316 aa17.92■□□□□ 0.46
SDR39U1-220ENST00000556548 P2RY2P41231 377 aa17.92■□□□□ 0.46
SDR39U1-220ENST00000556548 CNTN1Q12860 1018 aa17.92■□□□□ 0.46
SDR39U1-220ENST00000556548 CCNIQ14094 377 aa17.92■□□□□ 0.46
SDR39U1-220ENST00000556548 SYTL3Q4VX76 610 aa17.92■□□□□ 0.46
SDR39U1-220ENST00000556548 PLEKHS1Q5SXH7 462 aa17.92■□□□□ 0.46
SDR39U1-220ENST00000556548 CAPRIN2Q6IMN6 1127 aaKnown RBP17.92■□□□□ 0.46
SDR39U1-220ENST00000556548 ERN2Q76MJ5 926 aaKnown RBP17.92■□□□□ 0.46
SDR39U1-220ENST00000556548 FNDC5Q8NAU1 212 aa17.92■□□□□ 0.46
SDR39U1-220ENST00000556548 SLC26A7Q8TE54 656 aa17.92■□□□□ 0.46
SDR39U1-220ENST00000556548 ASZ1Q8WWH4 475 aa17.92■□□□□ 0.46
SDR39U1-220ENST00000556548 MTFMTQ96DP5 389 aaKnown RBP17.92■□□□□ 0.46
SDR39U1-220ENST00000556548 NUS1Q96E22 293 aa17.92■□□□□ 0.46
SDR39U1-220ENST00000556548 HIST1H2AHQ96KK5 128 aa17.92■□□□□ 0.46
SDR39U1-220ENST00000556548 TEX37Q96LM6 180 aa17.92■□□□□ 0.46
SDR39U1-220ENST00000556548 HIST1H2AJQ99878 128 aa17.92■□□□□ 0.46
SDR39U1-220ENST00000556548 SLC39A3Q9BRY0 314 aa17.92■□□□□ 0.46
SDR39U1-220ENST00000556548 H2AFJQ9BTM1 129 aa17.92■□□□□ 0.46
SDR39U1-220ENST00000556548 SLC12A9Q9BXP2 914 aa17.92■□□□□ 0.46
SDR39U1-220ENST00000556548 IL1RL2Q9HB29 575 aa17.92■□□□□ 0.46
SDR39U1-220ENST00000556548 FARSBQ9NSD9 589 aaKnown RBP17.92■□□□□ 0.46
SDR39U1-220ENST00000556548 ADA2Q9NZK5 511 aa17.92■□□□□ 0.46
SDR39U1-220ENST00000556548 CNOT6Q9ULM6 557 aaKnown RBP17.92■□□□□ 0.46
SDR39U1-220ENST00000556548 PLXNA2O75051 1894 aa17.92■□□□□ 0.46
SDR39U1-220ENST00000556548 LOC730098B7Z3J9 87 aa17.92■□□□□ 0.46
SDR39U1-220ENST00000556548 NRP2O60462 931 aa17.92■□□□□ 0.46
SDR39U1-220ENST00000556548 SOD1P00441 154 aa17.92■□□□□ 0.46
SDR39U1-220ENST00000556548 ATP4BP51164 291 aa17.92■□□□□ 0.46
SDR39U1-220ENST00000556548 ELP6Q0PNE2 266 aa17.92■□□□□ 0.46
SDR39U1-220ENST00000556548 CEACAM7Q14002 265 aa17.92■□□□□ 0.46
SDR39U1-220ENST00000556548 EFL1Q7Z2Z2 1120 aaKnown RBP17.92■□□□□ 0.46
SDR39U1-220ENST00000556548 CHPFQ8IZ52 775 aa17.92■□□□□ 0.46
SDR39U1-220ENST00000556548 SFRP1Q8N474 314 aa17.92■□□□□ 0.46
SDR39U1-220ENST00000556548 VPS35Q96QK1 796 aa17.92■□□□□ 0.46
SDR39U1-220ENST00000556548 SLC25A23Q9BV35 468 aa17.92■□□□□ 0.46
SDR39U1-220ENST00000556548 NFKBIL1Q9UBC1 381 aaPredicted RBP17.92■□□□□ 0.46
SDR39U1-220ENST00000556548 MRASO14807 208 aa17.91■□□□□ 0.46
SDR39U1-220ENST00000556548 SYNCRIPO60506 623 aaKnown RBP17.91■□□□□ 0.46
SDR39U1-220ENST00000556548 VPS4BO75351 444 aa17.91■□□□□ 0.46
SDR39U1-220ENST00000556548 AP2A2O94973 939 aa17.91■□□□□ 0.46
SDR39U1-220ENST00000556548 BAG2O95816 211 aa17.91■□□□□ 0.46
SDR39U1-220ENST00000556548 EPB42P16452 691 aa17.91■□□□□ 0.46
SDR39U1-220ENST00000556548 GPR1P46091 355 aa17.91■□□□□ 0.46
SDR39U1-220ENST00000556548 LRP8Q14114 963 aa17.91■□□□□ 0.46
SDR39U1-220ENST00000556548 NRSN1Q8IZ57 195 aa17.91■□□□□ 0.46
SDR39U1-220ENST00000556548 LRCH3Q96II8 777 aa17.91■□□□□ 0.46
SDR39U1-220ENST00000556548 TRIM54Q9BYV2 358 aa17.91■□□□□ 0.46
SDR39U1-220ENST00000556548 ATG10Q9H0Y0 220 aa17.91■□□□□ 0.46
SDR39U1-220ENST00000556548 OR2AG1Q9H205 316 aa17.91■□□□□ 0.46
SDR39U1-220ENST00000556548 KLQ9UEF7 1012 aa17.91■□□□□ 0.46
SDR39U1-220ENST00000556548 ST14Q9Y5Y6 855 aa17.91■□□□□ 0.46
SDR39U1-220ENST00000556548 MUC22E2RYF6 1773 aaPredicted RBP17.91■□□□□ 0.46
SDR39U1-220ENST00000556548 PABPN1LA6NDY0 278 aaKnown RBP17.9■□□□□ 0.46
SDR39U1-220ENST00000556548 H0Y858 1186 aa17.9■□□□□ 0.46
SDR39U1-220ENST00000556548 PSMD11O00231 422 aa17.9■□□□□ 0.46
SDR39U1-220ENST00000556548 C8GP07360 202 aa17.9■□□□□ 0.46
SDR39U1-220ENST00000556548 PRR35P0CG20 571 aa17.9■□□□□ 0.46
SDR39U1-220ENST00000556548 XRCC1P18887 633 aaPredicted RBP17.9■□□□□ 0.46
SDR39U1-220ENST00000556548 GRIA2P42262 883 aa17.9■□□□□ 0.46
SDR39U1-220ENST00000556548 PSME3P61289 254 aa17.9■□□□□ 0.46
SDR39U1-220ENST00000556548 ADAM15Q13444 863 aa17.9■□□□□ 0.46
SDR39U1-220ENST00000556548 ATP6AP1LQ52LC2 224 aa17.9■□□□□ 0.46
SDR39U1-220ENST00000556548 C6orf136Q5SQH8 315 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms