RNA–Protein interactions for RNA: ENST00000556523.1

SDR39U1-219, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 735 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-219ENST00000556523 RRADP55042 308 aa17.13■□□□□ 0.33
SDR39U1-219ENST00000556523 HADHBP55084 474 aaKnown RBP17.13■□□□□ 0.33
SDR39U1-219ENST00000556523 FAM198BQ6UWH4 519 aa17.13■□□□□ 0.33
SDR39U1-219ENST00000556523 HOOK3Q86VS8 718 aa17.13■□□□□ 0.33
SDR39U1-219ENST00000556523 RAB43Q86YS6 212 aa17.13■□□□□ 0.33
SDR39U1-219ENST00000556523 NXPE1Q8N323 547 aa17.13■□□□□ 0.33
SDR39U1-219ENST00000556523 LILRA3Q8N6C8 439 aaPredicted RBP17.13■□□□□ 0.33
SDR39U1-219ENST00000556523 ADAMTS17Q8TE56 1095 aa17.13■□□□□ 0.33
SDR39U1-219ENST00000556523 N4BP2L2Q92802 583 aaPredicted RBP17.13■□□□□ 0.33
SDR39U1-219ENST00000556523 HEMGNQ9BXL5 484 aa17.13■□□□□ 0.33
SDR39U1-219ENST00000556523 SLAMF7Q9NQ25 335 aa17.13■□□□□ 0.33
SDR39U1-219ENST00000556523 PLEKHB1Q9UF11 243 aaPredicted RBP17.13■□□□□ 0.33
SDR39U1-219ENST00000556523 SERTAD3Q9UJW9 196 aa17.13■□□□□ 0.33
SDR39U1-219ENST00000556523 PADI2Q9Y2J8 665 aa17.13■□□□□ 0.33
SDR39U1-219ENST00000556523 MAP4K5Q9Y4K4 846 aa17.13■□□□□ 0.33
SDR39U1-219ENST00000556523 CCDC66A2RUB6 948 aa17.12■□□□□ 0.33
SDR39U1-219ENST00000556523 ZNF185O15231 689 aa17.12■□□□□ 0.33
SDR39U1-219ENST00000556523 LCA5LO95447 670 aa17.12■□□□□ 0.33
SDR39U1-219ENST00000556523 ATP1B2P14415 290 aaPredicted RBP17.12■□□□□ 0.33
SDR39U1-219ENST00000556523 VARSP26640 1264 aaKnown RBP17.12■□□□□ 0.33
SDR39U1-219ENST00000556523 PSMB4P28070 264 aa17.12■□□□□ 0.33
SDR39U1-219ENST00000556523 RORAP35398 523 aa17.12■□□□□ 0.33
SDR39U1-219ENST00000556523 MAGEA1P43355 309 aa17.12■□□□□ 0.33
SDR39U1-219ENST00000556523 LMAN1P49257 510 aa17.12■□□□□ 0.33
SDR39U1-219ENST00000556523 ITGA1P56199 1179 aa17.12■□□□□ 0.33
SDR39U1-219ENST00000556523 TMPRSS15P98073 1019 aa17.12■□□□□ 0.33
SDR39U1-219ENST00000556523 PTCHD3Q3KNS1 767 aa17.12■□□□□ 0.33
SDR39U1-219ENST00000556523 C11orf63Q6NUN7 778 aa17.12■□□□□ 0.33
SDR39U1-219ENST00000556523 MED25Q71SY5 747 aa17.12■□□□□ 0.33
SDR39U1-219ENST00000556523 SNX20Q7Z614 316 aa17.12■□□□□ 0.33
SDR39U1-219ENST00000556523 TMEM102Q8N9M5 508 aaPredicted RBP17.12■□□□□ 0.33
SDR39U1-219ENST00000556523 OR13C4Q8NGS5 318 aa17.12■□□□□ 0.33
SDR39U1-219ENST00000556523 OR1L3Q8NH93 324 aa17.12■□□□□ 0.33
SDR39U1-219ENST00000556523 SSC4DQ8WTU2 575 aa17.12■□□□□ 0.33
SDR39U1-219ENST00000556523 PPP1R2P1Q96PQ5 205 aa17.12■□□□□ 0.33
SDR39U1-219ENST00000556523 HGH1Q9BTY7 390 aa17.12■□□□□ 0.33
SDR39U1-219ENST00000556523 C10orf88Q9H8K7 445 aa17.12■□□□□ 0.33
SDR39U1-219ENST00000556523 COG4Q9H9E3 785 aa17.12■□□□□ 0.33
SDR39U1-219ENST00000556523 PCMTD2Q9NV79 361 aa17.12■□□□□ 0.33
SDR39U1-219ENST00000556523 GPR83Q9NYM4 423 aa17.12■□□□□ 0.33
SDR39U1-219ENST00000556523 LUZP4Q9P127 313 aa17.12■□□□□ 0.33
SDR39U1-219ENST00000556523 SHANK1Q9Y566 2161 aa17.11■□□□□ 0.33
SDR39U1-219ENST00000556523 C17orf113A0A1B0GUU1 675 aa17.11■□□□□ 0.33
SDR39U1-219ENST00000556523 A6NL46 340 aa17.11■□□□□ 0.33
SDR39U1-219ENST00000556523 C2orf74A8MZ97 194 aa17.11■□□□□ 0.33
SDR39U1-219ENST00000556523 E7EQ34 232 aa17.11■□□□□ 0.33
SDR39U1-219ENST00000556523 BTN3A1O00481 513 aa17.11■□□□□ 0.33
SDR39U1-219ENST00000556523 SGTAO43765 313 aa17.11■□□□□ 0.33
SDR39U1-219ENST00000556523 CEACAM4O75871 244 aa17.11■□□□□ 0.33
SDR39U1-219ENST00000556523 HBQ1P09105 142 aa17.11■□□□□ 0.33
SDR39U1-219ENST00000556523 MSL3P1P0C860 447 aa17.11■□□□□ 0.33
SDR39U1-219ENST00000556523 ST6GAL1P15907 406 aa17.11■□□□□ 0.33
SDR39U1-219ENST00000556523 AGXTP21549 392 aa17.11■□□□□ 0.33
SDR39U1-219ENST00000556523 PRDX3P30048 256 aaKnown RBP17.11■□□□□ 0.33
SDR39U1-219ENST00000556523 ZNF140P52738 457 aaPredicted RBP17.11■□□□□ 0.33
SDR39U1-219ENST00000556523 XIAPP98170 497 aa17.11■□□□□ 0.33
SDR39U1-219ENST00000556523 OLIG2Q13516 323 aa17.11■□□□□ 0.33
SDR39U1-219ENST00000556523 NCF4Q15080 339 aa17.11■□□□□ 0.33
SDR39U1-219ENST00000556523 INPP5JQ15735 1006 aaPredicted RBP17.11■□□□□ 0.33
SDR39U1-219ENST00000556523 LCN10Q6JVE6 187 aa17.11■□□□□ 0.33
SDR39U1-219ENST00000556523 JMJD6Q6NYC1 403 aaPredicted RBP17.11■□□□□ 0.33
SDR39U1-219ENST00000556523 RANBP10Q6VN20 620 aa17.11■□□□□ 0.33
SDR39U1-219ENST00000556523 GPR135Q8IZ08 494 aa17.11■□□□□ 0.33
SDR39U1-219ENST00000556523 SPC24Q8NBT2 197 aa17.11■□□□□ 0.33
SDR39U1-219ENST00000556523 FDCSPQ8NFU4 85 aa17.11■□□□□ 0.33
SDR39U1-219ENST00000556523 SGSM3Q96HU1 749 aa17.11■□□□□ 0.33
SDR39U1-219ENST00000556523 GORASP1Q9BQQ3 440 aa17.11■□□□□ 0.33
SDR39U1-219ENST00000556523 MFRPQ9BY79 579 aa17.11■□□□□ 0.33
SDR39U1-219ENST00000556523 FAM96AQ9H5X1 160 aa17.11■□□□□ 0.33
SDR39U1-219ENST00000556523 MVB12BQ9H7P6 319 aa17.11■□□□□ 0.33
SDR39U1-219ENST00000556523 LUC7LQ9NQ29 371 aaKnown RBP17.11■□□□□ 0.33
SDR39U1-219ENST00000556523 AGAP14A8MT82 685 aa17.1■□□□□ 0.33
SDR39U1-219ENST00000556523 KCNN4O15554 427 aa17.1■□□□□ 0.33
SDR39U1-219ENST00000556523 ADRA1AP35348 466 aa17.1■□□□□ 0.33
SDR39U1-219ENST00000556523 EIF3EP60228 445 aaKnown RBP17.1■□□□□ 0.33
SDR39U1-219ENST00000556523 COPS2P61201 443 aa17.1■□□□□ 0.33
SDR39U1-219ENST00000556523 OTUD4Q01804 1114 aaKnown RBP17.1■□□□□ 0.33
SDR39U1-219ENST00000556523 ATP1A4Q13733 1029 aa17.1■□□□□ 0.33
SDR39U1-219ENST00000556523 KYNUQ16719 465 aa17.1■□□□□ 0.33
SDR39U1-219ENST00000556523 GPR33Q49SQ1 333 aa17.1■□□□□ 0.33
SDR39U1-219ENST00000556523 ZRANB3Q5FWF4 1079 aa17.1■□□□□ 0.33
SDR39U1-219ENST00000556523 ANKRD20A2Q5SQ80 823 aa17.1■□□□□ 0.33
SDR39U1-219ENST00000556523 ANKRD20A1Q5TYW2 823 aa17.1■□□□□ 0.33
SDR39U1-219ENST00000556523 FAM69BQ5VUD6 431 aa17.1■□□□□ 0.33
SDR39U1-219ENST00000556523 ANKRD20A3Q5VUR7 823 aa17.1■□□□□ 0.33
SDR39U1-219ENST00000556523 SLC6A19Q695T7 634 aa17.1■□□□□ 0.33
SDR39U1-219ENST00000556523 AMIGO1Q86WK6 493 aa17.1■□□□□ 0.33
SDR39U1-219ENST00000556523 LURAP1LQ8IV03 231 aa17.1■□□□□ 0.33
SDR39U1-219ENST00000556523 CCDC170Q8IYT3 715 aa17.1■□□□□ 0.33
SDR39U1-219ENST00000556523 OR52E1Q8NGJ3 308 aa17.1■□□□□ 0.33
SDR39U1-219ENST00000556523 ACTL9Q8TC94 416 aa17.1■□□□□ 0.33
SDR39U1-219ENST00000556523 KRT35Q92764 455 aa17.1■□□□□ 0.33
SDR39U1-219ENST00000556523 TBL1YQ9BQ87 522 aa17.1■□□□□ 0.33
SDR39U1-219ENST00000556523 C17orf62Q9BQA9 187 aa17.1■□□□□ 0.33
SDR39U1-219ENST00000556523 DPH2Q9BQC3 489 aaPredicted RBP17.1■□□□□ 0.33
SDR39U1-219ENST00000556523 DHRS4Q9BTZ2 278 aa17.1■□□□□ 0.33
SDR39U1-219ENST00000556523 NUDT9Q9BW91 350 aa17.1■□□□□ 0.33
SDR39U1-219ENST00000556523 PITPNM3Q9BZ71 974 aa17.1■□□□□ 0.33
SDR39U1-219ENST00000556523 KLHL25Q9H0H3 589 aa17.1■□□□□ 0.33
SDR39U1-219ENST00000556523 CUEDC1Q9NWM3 386 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms