RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 PACSIN2Q9UNF0 486 aaPredicted RBP5.14□□□□□ -1.59
SRP54-211ENST00000556445 COX11Q9Y6N1 276 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 PTPRJQ12913 1337 aa5.14□□□□□ -1.59
SRP54-211ENST00000556445 CASP8AP2Q9UKL3 1982 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 A0A087WWL8 130 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 ZNF785A8K8V0 405 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 UBXN8O00124 270 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 TSPAN4O14817 238 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 PGRMC2O15173 223 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 YY2O15391 372 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 SEPT4O43236 478 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 B4GALT5O43286 388 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 HSF2BPO75031 334 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 GUCY1B2O75343 617 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 PROSCO94903 275 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 SEC31AO94979 1220 aaKnown RBP5.13□□□□□ -1.59
SRP54-211ENST00000556445 TPOP07202 933 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 WEE2P0C1S8 567 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 CYBAP13498 195 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 RARGP13631 454 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 CD19P15391 556 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 KCNA5P22460 613 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 MMP8P22894 467 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 PTAFRP25105 342 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 MST1P26927 711 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 SERPINA4P29622 427 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 RDXP35241 583 aaKnown RBP5.13□□□□□ -1.59
SRP54-211ENST00000556445 FNTAP49354 379 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 DNA2P51530 1060 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 ZNF135P52742 658 aaPredicted RBP5.13□□□□□ -1.59
SRP54-211ENST00000556445 C21orf58P58505 322 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 OSTNP61366 133 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 GUCY2DQ02846 1103 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 INCA1Q0VD86 236 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 HABP2Q14520 560 aaPredicted RBP5.13□□□□□ -1.59
SRP54-211ENST00000556445 HLXQ14774 488 aaPredicted RBP5.13□□□□□ -1.59
SRP54-211ENST00000556445 RPS6KA2Q15349 733 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 HADHQ16836 314 aaKnown RBP5.13□□□□□ -1.59
SRP54-211ENST00000556445 MAJINQ3KP22 176 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 C9orf152Q5JTZ5 239 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 GLRA4Q5JXX5 417 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 SPDYCQ5MJ68 293 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 TMEM63BQ5T3F8 832 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 SPOPLQ6IQ16 392 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 MRNIPQ6NTE8 343 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 DNAJC24Q6P3W2 148 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 DCUN1D2Q6PH85 259 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 SUSD1Q6UWL2 747 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 MEX3BQ6ZN04 569 aaKnown RBP5.13□□□□□ -1.59
SRP54-211ENST00000556445 MICALCLQ6ZW33 695 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 RD3Q7Z3Z2 195 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 RABEPKQ7Z6M1 372 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 CROCCP2Q86T23 111 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 PALB2Q86YC2 1186 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 LINC00346Q8IVM7 164 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 HDDC3Q8N4P3 179 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 MREGQ8N565 214 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 PCSK9Q8NBP7 692 aaKnown RBP5.13□□□□□ -1.59
SRP54-211ENST00000556445 ZCCHC10Q8TBK6 192 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 CPT1BQ92523 772 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 SNX19Q92543 992 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 KAT2BQ92831 832 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 CD101Q93033 1021 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 MR1Q95460 341 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 HPDLQ96IR7 371 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 CPB2Q96IY4 423 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 MS4A14Q96JA4 679 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 GCNAQ96QF7 691 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 TRIB1Q96RU8 372 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 SMOQ99835 787 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 C11orf70Q9BRQ4 267 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 DUSP26Q9BV47 211 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 FAM49AQ9H0Q0 323 aaPredicted RBP5.13□□□□□ -1.59
SRP54-211ENST00000556445 VPS37BQ9H9H4 285 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 EPB41L5Q9HCM4 733 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 LTB4R2Q9NPC1 389 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 GDF3Q9NR23 364 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 GIMAP4Q9NUV9 329 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 SLC38A7Q9NVC3 462 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 ZNF446Q9NWS9 450 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 PPP1R14DQ9NXH3 145 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 DDX43Q9NXZ2 648 aaKnown RBP5.13□□□□□ -1.59
SRP54-211ENST00000556445 NINJ2Q9NZG7 142 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 SLC25A10Q9UBX3 287 aaPredicted RBP5.13□□□□□ -1.59
SRP54-211ENST00000556445 PCYOX1Q9UHG3 505 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 BARX2Q9UMQ3 279 aaPredicted RBP5.13□□□□□ -1.59
SRP54-211ENST00000556445 AGAP1Q9UPQ3 857 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 POMT1Q9Y6A1 747 aa5.13□□□□□ -1.59
SRP54-211ENST00000556445 TRAV34A0A0B4J273 112 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 ARHGEF37A1IGU5 675 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 GLOD5A6NK44 160 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 SIGLEC16A6NMB1 481 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 MYO1GB0I1T2 1018 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 DNM1LO00429 736 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 MCF2LO15068 1137 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 MPPED1O15442 326 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 RAD51CO43502 376 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 TSC22D2O75157 780 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 RASSF9O75901 435 aa5.12□□□□□ -1.59
SRP54-211ENST00000556445 C1QL1O75973 258 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms