RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 CLEC4CQ8WTT0 213 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 PDCD6IPQ8WUM4 868 aaKnown RBP4.38□□□□□ -1.71
ATXN3-241ENST00000556374 LZICQ8WZA0 190 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 EME1Q96AY2 570 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 C18orf25Q96B23 403 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-241ENST00000556374 RCN3Q96D15 328 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 SMARCD1Q96GM5 515 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 CNDP1Q96KN2 507 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 CNBD2Q96M20 576 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 ZNF778Q96MU6 729 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 CATSPER2Q96P56 530 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 GCNAQ96QF7 691 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 NPY6RQ99463 290 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 SORT1Q99523 831 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 GPR22Q99680 433 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 TBL1YQ9BQ87 522 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 SOX7Q9BT81 388 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 KATNAL1Q9BW62 490 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 SLC46A2Q9BY10 475 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 DUSP16Q9BY84 665 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 B3GNT5Q9BYG0 378 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 NUF2Q9BZD4 464 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 DRC3Q9H069 523 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 RAB6CQ9H0N0 254 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 TRPV6Q9H1D0 765 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 MRPL46Q9H2W6 279 aaKnown RBP4.38□□□□□ -1.71
ATXN3-241ENST00000556374 NXF3Q9H4D5 531 aaKnown RBP4.38□□□□□ -1.71
ATXN3-241ENST00000556374 CATSPERBQ9H7T0 1116 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 WDR41Q9HAD4 459 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 CASS4Q9NQ75 786 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 CNGB3Q9NQW8 809 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 TBC1D13Q9NVG8 400 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 PIH1D1Q9NWS0 290 aaKnown RBP4.38□□□□□ -1.71
ATXN3-241ENST00000556374 DDIT4Q9NX09 232 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 GDAP2Q9NXN4 497 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 SLC17A6Q9P2U8 582 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 XPR1Q9UBH6 696 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 VPS28Q9UK41 221 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 TMCO1Q9UM00 188 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 G3BP2Q9UN86 482 aaKnown RBP4.38□□□□□ -1.71
ATXN3-241ENST00000556374 DMTF1Q9Y222 760 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 ACOT9Q9Y305 439 aa4.38□□□□□ -1.71
ATXN3-241ENST00000556374 CHD6Q8TD26 2715 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 FAM208BQ5VWN6 2430 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 TSC2P49815 1807 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 ATG2AQ2TAZ0 1938 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 SMIM35A0A1B0GVV1 85 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 CAPN8A6NHC0 703 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 BBIP1A8MTZ0 92 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 DFFAO00273 331 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 DCLK1O15075 740 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 B3GALT2O43825 422 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 RNASEH1O60930 286 aaKnown RBP4.37□□□□□ -1.71
ATXN3-241ENST00000556374 USP12O75317 370 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 CRCPO75575 148 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 CNMDO75829 334 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 ZMPSTE24O75844 475 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 SEC24DO94855 1032 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-241ENST00000556374 RTN3O95197 1032 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-241ENST00000556374 ABHD16AO95870 558 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 TOP3BO95985 862 aaKnown RBP4.37□□□□□ -1.71
ATXN3-241ENST00000556374 C2P06681 752 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 RBP1P09455 135 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 FAM163BP0C2L3 166 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 IQCF3P0C7M6 154 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 JMJD7P0C870 316 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 PABPC4LP0CB38 370 aaKnown RBP4.37□□□□□ -1.71
ATXN3-241ENST00000556374 ODC1P11926 461 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 DARSP14868 501 aaKnown RBP4.37□□□□□ -1.71
ATXN3-241ENST00000556374 KCNE1P15382 129 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 HOXB8P17481 243 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-241ENST00000556374 PSMC3P17980 439 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 VCLP18206 1134 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 ATP5F1P24539 256 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-241ENST00000556374 ADORA2AP29274 412 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 AVPR1AP37288 418 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 ADCYAP1R1P41586 468 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 GRIA1P42261 906 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 RPL5P46777 297 aaKnown RBP4.37□□□□□ -1.71
ATXN3-241ENST00000556374 CD151P48509 253 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 LHX1P48742 406 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 HCAR3P49019 387 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 RPL34P49207 117 aaKnown RBP4.37□□□□□ -1.71
ATXN3-241ENST00000556374 CLCN5P51795 746 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 NAGLUP54802 743 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 MAP3K7CLP57077 242 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 BLOC1S1P78537 153 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 MEF2AQ02078 507 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-241ENST00000556374 FOLH1Q04609 750 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 GALNT2Q10471 571 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 TCF15Q12870 199 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 SLC10A2Q12908 348 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-241ENST00000556374 MSLNQ13421 630 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-241ENST00000556374 RFTN1Q14699 578 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-241ENST00000556374 GRM3Q14832 879 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 FAM83EQ2M2I3 478 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 KIF19Q2TAC6 998 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 SLC9B1Q4ZJI4 515 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 SFT2D3Q587I9 215 aa4.37□□□□□ -1.71
ATXN3-241ENST00000556374 PCID2Q5JVF3 399 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms