RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 PDHA2P29803 388 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 CCNFP41002 786 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 GPR3P46089 330 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 FASLGP48023 281 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 PPM1FP49593 454 aaPredicted RBP7.46□□□□□ -1.22
TDP1-214ENST00000556063 SERPINB8P50452 374 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 CDKN2DP55273 166 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 MAZP56270 477 aaKnown RBP7.46□□□□□ -1.22
TDP1-214ENST00000556063 TAS2R39P59534 338 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 RAB10P61026 200 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 E2F1Q01094 437 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 HHEXQ03014 270 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 ILKQ13418 452 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 RASA2Q15283 850 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 RPE65Q16518 533 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 PROX2Q3B8N5 592 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 ZNF658BQ4V348 819 aaPredicted RBP7.46□□□□□ -1.22
TDP1-214ENST00000556063 MROH9Q5TGP6 573 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 CAPRIN2Q6IMN6 1127 aaKnown RBP7.46□□□□□ -1.22
TDP1-214ENST00000556063 KLHL35Q6PF15 583 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 ADGRD1Q6QNK2 874 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 PAQR3Q6TCH7 311 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 UNC5DQ6UXZ4 953 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 PIP4P1Q86T03 277 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 TBC1D1Q86TI0 1168 aaPredicted RBP7.46□□□□□ -1.22
TDP1-214ENST00000556063 ALYREFQ86V81 257 aaKnown RBP7.46□□□□□ -1.22
TDP1-214ENST00000556063 C17orf82Q86X59 251 aaPredicted RBP7.46□□□□□ -1.22
TDP1-214ENST00000556063 TDRPQ86YL5 185 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 SLC35F3Q8IY50 421 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 CPNE9Q8IYJ1 553 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 TBC1D21Q8IYX1 336 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 RIBC1Q8N443 379 aaPredicted RBP7.46□□□□□ -1.22
TDP1-214ENST00000556063 LILRA3Q8N6C8 439 aaPredicted RBP7.46□□□□□ -1.22
TDP1-214ENST00000556063 KYQ8NBH2 561 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 SIDT2Q8NBJ9 832 aaKnown RBP7.46□□□□□ -1.22
TDP1-214ENST00000556063 PHC3Q8NDX5 983 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 WDR48Q8TAF3 677 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 LKAAEAR1Q8TD35 194 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 CD200R1Q8TD46 325 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 ANKRD7Q92527 254 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 CABS1Q96KC9 395 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 RMDN2Q96LZ7 410 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 TSNARE1Q96NA8 513 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 FERD3LQ96RJ6 166 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 INSM2Q96T92 566 aaPredicted RBP7.46□□□□□ -1.22
TDP1-214ENST00000556063 SLC38A3Q99624 504 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 RTKNQ9BST9 563 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 MCMBPQ9BTE3 642 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 TRIM54Q9BYV2 358 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 ROPN1BQ9BZX4 212 aaPredicted RBP7.46□□□□□ -1.22
TDP1-214ENST00000556063 EPB41L4BQ9H329 900 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 TRIT1Q9H3H1 467 aaKnown RBP7.46□□□□□ -1.22
TDP1-214ENST00000556063 EPB41L1Q9H4G0 881 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 UCK1Q9HA47 277 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 ROPN1Q9HAT0 212 aaPredicted RBP7.46□□□□□ -1.22
TDP1-214ENST00000556063 GPAMQ9HCL2 828 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 LRIT1Q9P2V4 623 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 POLG2Q9UHN1 485 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 BTBD3Q9Y2F9 522 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 ACOT9Q9Y305 439 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 ST14Q9Y5Y6 855 aa7.46□□□□□ -1.22
TDP1-214ENST00000556063 COL5A1P20908 1838 aaPredicted RBP7.45□□□□□ -1.22
TDP1-214ENST00000556063 A0A087X1B8 175 aa7.45□□□□□ -1.22
TDP1-214ENST00000556063 TLDC2A0PJX2 215 aa7.45□□□□□ -1.22
TDP1-214ENST00000556063 EME2A4GXA9 379 aaPredicted RBP7.45□□□□□ -1.22
TDP1-214ENST00000556063 LILRA5A6NI73 299 aa7.45□□□□□ -1.22
TDP1-214ENST00000556063 OR52A4PA6NMU1 304 aa7.45□□□□□ -1.22
TDP1-214ENST00000556063 TRIM49D1C9J1S8 452 aa7.45□□□□□ -1.22
TDP1-214ENST00000556063 SLC16A5O15375 505 aa7.45□□□□□ -1.22
TDP1-214ENST00000556063 ZBTB14O43829 449 aa7.45□□□□□ -1.22
TDP1-214ENST00000556063 CBFA2T3O75081 653 aa7.45□□□□□ -1.22
TDP1-214ENST00000556063 FAM155BO75949 473 aa7.45□□□□□ -1.22
TDP1-214ENST00000556063 EML2O95834 649 aa7.45□□□□□ -1.22
TDP1-214ENST00000556063 MPOP05164 745 aa7.45□□□□□ -1.22
TDP1-214ENST00000556063 GP1BAP07359 652 aa7.45□□□□□ -1.22
TDP1-214ENST00000556063 C8GP07360 202 aa7.45□□□□□ -1.22
TDP1-214ENST00000556063 HIST1H2AGP0C0S8 130 aaPredicted RBP7.45□□□□□ -1.22
TDP1-214ENST00000556063 CEACAM1P13688 526 aa7.45□□□□□ -1.22
TDP1-214ENST00000556063 BRAFP15056 766 aa7.45□□□□□ -1.22
TDP1-214ENST00000556063 ZNF37AP17032 561 aaPredicted RBP7.45□□□□□ -1.22
TDP1-214ENST00000556063 HIST1H2ADP20671 130 aa7.45□□□□□ -1.22
TDP1-214ENST00000556063 ACP1P24666 158 aa7.45□□□□□ -1.22
TDP1-214ENST00000556063 ACADLP28330 430 aa7.45□□□□□ -1.22
TDP1-214ENST00000556063 SLC26A3P40879 764 aa7.45□□□□□ -1.22
TDP1-214ENST00000556063 SLC19A1P41440 591 aa7.45□□□□□ -1.22
TDP1-214ENST00000556063 KPNA2P52292 529 aaKnown RBP7.45□□□□□ -1.22
TDP1-214ENST00000556063 EPHA4P54764 986 aa7.45□□□□□ -1.22
TDP1-214ENST00000556063 ATP6V0D1P61421 351 aa7.45□□□□□ -1.22
TDP1-214ENST00000556063 UBE2IP63279 158 aaKnown RBP7.45□□□□□ -1.22
TDP1-214ENST00000556063 ABRQ12979 859 aa7.45□□□□□ -1.22
TDP1-214ENST00000556063 GBX1Q14549 363 aa7.45□□□□□ -1.22
TDP1-214ENST00000556063 CLCA4Q14CN2 919 aa7.45□□□□□ -1.22
TDP1-214ENST00000556063 PLCL1Q15111 1095 aa7.45□□□□□ -1.22
TDP1-214ENST00000556063 TRIP6Q15654 476 aaKnown RBP7.45□□□□□ -1.22
TDP1-214ENST00000556063 ZKSCAN8Q15776 578 aaPredicted RBP7.45□□□□□ -1.22
TDP1-214ENST00000556063 CLPPQ16740 277 aaPredicted RBP7.45□□□□□ -1.22
TDP1-214ENST00000556063 ACSBG2Q5FVE4 666 aa7.45□□□□□ -1.22
TDP1-214ENST00000556063 KLC3Q6P597 504 aa7.45□□□□□ -1.22
TDP1-214ENST00000556063 NAPRTQ6XQN6 538 aa7.45□□□□□ -1.22
TDP1-214ENST00000556063 TMEM26Q6ZUK4 368 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms