RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 MYL2P10916 166 aa10.79□□□□□ -0.68
TMEM260-208ENST00000555905 CPA3P15088 417 aa10.79□□□□□ -0.68
TMEM260-208ENST00000555905 NME1P15531 152 aaKnown RBP10.79□□□□□ -0.68
TMEM260-208ENST00000555905 CHN1P15882 459 aa10.79□□□□□ -0.68
TMEM260-208ENST00000555905 MAP4P27816 1152 aaKnown RBP10.79□□□□□ -0.68
TMEM260-208ENST00000555905 PDHA2P29803 388 aa10.79□□□□□ -0.68
TMEM260-208ENST00000555905 HNRNPKP61978 463 aaKnown RBP eCLIP10.79□□□□□ -0.68
TMEM260-208ENST00000555905 CTBSQ01459 385 aa10.79□□□□□ -0.68
TMEM260-208ENST00000555905 SP140Q13342 867 aa10.79□□□□□ -0.68
TMEM260-208ENST00000555905 ELOCQ15369 112 aa10.79□□□□□ -0.68
TMEM260-208ENST00000555905 OR4D1Q15615 310 aa10.79□□□□□ -0.68
TMEM260-208ENST00000555905 TSNQ15631 228 aaKnown RBP10.79□□□□□ -0.68
TMEM260-208ENST00000555905 DUOXA1Q1HG43 343 aa10.79□□□□□ -0.68
TMEM260-208ENST00000555905 ZNF542PQ5EBM4 170 aa10.79□□□□□ -0.68
TMEM260-208ENST00000555905 TECRLQ5HYJ1 363 aa10.79□□□□□ -0.68
TMEM260-208ENST00000555905 CYHR1Q6ZMK1 362 aa10.79□□□□□ -0.68
TMEM260-208ENST00000555905 UBE2R2Q712K3 238 aaPredicted RBP10.79□□□□□ -0.68
TMEM260-208ENST00000555905 PDZD3Q86UT5 571 aa10.79□□□□□ -0.68
TMEM260-208ENST00000555905 GPSM1Q86YR5 675 aa10.79□□□□□ -0.68
TMEM260-208ENST00000555905 CFAP61Q8NHU2 1237 aa10.79□□□□□ -0.68
TMEM260-208ENST00000555905 MDM1Q8TC05 714 aa10.79□□□□□ -0.68
TMEM260-208ENST00000555905 DENND1AQ8TEH3 1009 aa10.79□□□□□ -0.68
TMEM260-208ENST00000555905 DYDC1Q8WWB3 177 aa10.79□□□□□ -0.68
TMEM260-208ENST00000555905 SREK1Q8WXA9 508 aaKnown RBP10.79□□□□□ -0.68
TMEM260-208ENST00000555905 ASB11Q8WXH4 323 aa10.79□□□□□ -0.68
TMEM260-208ENST00000555905 PTERQ96BW5 349 aa10.79□□□□□ -0.68
TMEM260-208ENST00000555905 PRRX2Q99811 253 aa10.79□□□□□ -0.68
TMEM260-208ENST00000555905 TRIM54Q9BYV2 358 aa10.79□□□□□ -0.68
TMEM260-208ENST00000555905 WWP1Q9H0M0 922 aa10.79□□□□□ -0.68
TMEM260-208ENST00000555905 OR52A5Q9H2C5 316 aa10.79□□□□□ -0.68
TMEM260-208ENST00000555905 ERVMER34-1Q9H9K5 563 aa10.79□□□□□ -0.68
TMEM260-208ENST00000555905 TMEM74BQ9NUR3 256 aa10.79□□□□□ -0.68
TMEM260-208ENST00000555905 OGFRQ9NZT2 677 aa10.79□□□□□ -0.68
TMEM260-208ENST00000555905 CPSF2Q9P2I0 782 aaKnown RBP10.79□□□□□ -0.68
TMEM260-208ENST00000555905 PNMA8BQ9ULN7 279 aaPredicted RBP10.79□□□□□ -0.68
TMEM260-208ENST00000555905 TMCO1Q9UM00 188 aa10.79□□□□□ -0.68
TMEM260-208ENST00000555905 PSMD13Q9UNM6 376 aa10.79□□□□□ -0.68
TMEM260-208ENST00000555905 PLEKHM1Q9Y4G2 1056 aa10.79□□□□□ -0.68
TMEM260-208ENST00000555905 FANCMQ8IYD8 2048 aa10.79□□□□□ -0.68
TMEM260-208ENST00000555905 SUPT3HB4E1H0 165 aa10.78□□□□□ -0.68
TMEM260-208ENST00000555905 GFYI3L273 518 aa10.78□□□□□ -0.68
TMEM260-208ENST00000555905 TK2O00142 265 aa10.78□□□□□ -0.68
TMEM260-208ENST00000555905 POLR3GO15318 223 aaPredicted RBP10.78□□□□□ -0.68
TMEM260-208ENST00000555905 SUPT3HO75486 399 aa10.78□□□□□ -0.68
TMEM260-208ENST00000555905 S100BP04271 92 aaPredicted RBP10.78□□□□□ -0.68
TMEM260-208ENST00000555905 CFIP05156 583 aa10.78□□□□□ -0.68
TMEM260-208ENST00000555905 HIST1H2AGP0C0S8 130 aaPredicted RBP10.78□□□□□ -0.68
TMEM260-208ENST00000555905 TPBGLP0DKB5 382 aa10.78□□□□□ -0.68
TMEM260-208ENST00000555905 NEFHP12036 1026 aa10.78□□□□□ -0.68
TMEM260-208ENST00000555905 HIST1H2ADP20671 130 aa10.78□□□□□ -0.68
TMEM260-208ENST00000555905 CYP2A7P20853 494 aa10.78□□□□□ -0.68
TMEM260-208ENST00000555905 RPL10P27635 214 aaKnown RBP10.78□□□□□ -0.68
TMEM260-208ENST00000555905 ACTR1BP42025 376 aa10.78□□□□□ -0.68
TMEM260-208ENST00000555905 HALP42357 657 aa10.78□□□□□ -0.68
TMEM260-208ENST00000555905 ETV4P43268 484 aa10.78□□□□□ -0.68
TMEM260-208ENST00000555905 SERPINB4P48594 390 aa10.78□□□□□ -0.68
TMEM260-208ENST00000555905 ACTR1AP61163 376 aa10.78□□□□□ -0.68
TMEM260-208ENST00000555905 IL9RQ01113 521 aa10.78□□□□□ -0.68
TMEM260-208ENST00000555905 TCEA2Q15560 299 aa10.78□□□□□ -0.68
TMEM260-208ENST00000555905 PRRT3Q5FWE3 981 aa10.78□□□□□ -0.68
TMEM260-208ENST00000555905 PEAR1Q5VY43 1037 aaPredicted RBP10.78□□□□□ -0.68
TMEM260-208ENST00000555905 SLC30A9Q6PML9 568 aa10.78□□□□□ -0.68
TMEM260-208ENST00000555905 XKR5Q6UX68 686 aa10.78□□□□□ -0.68
TMEM260-208ENST00000555905 UNC5DQ6UXZ4 953 aa10.78□□□□□ -0.68
TMEM260-208ENST00000555905 WASH2PQ6VEQ5 465 aa10.78□□□□□ -0.68
TMEM260-208ENST00000555905 ZYG11AQ6WRX3 759 aa10.78□□□□□ -0.68
TMEM260-208ENST00000555905 TAF8Q7Z7C8 310 aa10.78□□□□□ -0.68
TMEM260-208ENST00000555905 TAX1BP1Q86VP1 789 aa10.78□□□□□ -0.68
TMEM260-208ENST00000555905 MAGEC3Q8TD91 643 aa10.78□□□□□ -0.68
TMEM260-208ENST00000555905 MCOLN3Q8TDD5 553 aa10.78□□□□□ -0.68
TMEM260-208ENST00000555905 GPBAR1Q8TDU6 330 aa10.78□□□□□ -0.68
TMEM260-208ENST00000555905 EXT2Q93063 718 aa10.78□□□□□ -0.68
TMEM260-208ENST00000555905 CCDC126Q96EE4 140 aa10.78□□□□□ -0.68
TMEM260-208ENST00000555905 LOXL4Q96JB6 756 aa10.78□□□□□ -0.68
TMEM260-208ENST00000555905 HIST1H2AHQ96KK5 128 aa10.78□□□□□ -0.68
TMEM260-208ENST00000555905 HIST1H2AJQ99878 128 aa10.78□□□□□ -0.68
TMEM260-208ENST00000555905 H2AFJQ9BTM1 129 aa10.78□□□□□ -0.68
TMEM260-208ENST00000555905 SLC12A9Q9BXP2 914 aa10.78□□□□□ -0.68
TMEM260-208ENST00000555905 TCEAL2Q9H3H9 227 aaPredicted RBP10.78□□□□□ -0.68
TMEM260-208ENST00000555905 PARVBQ9HBI1 364 aa10.78□□□□□ -0.68
TMEM260-208ENST00000555905 MLXIPLQ9NP71 852 aa10.78□□□□□ -0.68
TMEM260-208ENST00000555905 WASH6PQ9NQA3 447 aa10.78□□□□□ -0.68
TMEM260-208ENST00000555905 CD274Q9NZQ7 290 aa10.78□□□□□ -0.68
TMEM260-208ENST00000555905 SPASTQ9UBP0 616 aa10.78□□□□□ -0.68
TMEM260-208ENST00000555905 KLF15Q9UIH9 416 aa10.78□□□□□ -0.68
TMEM260-208ENST00000555905 ADAMTS6Q9UKP5 1117 aa10.78□□□□□ -0.68
TMEM260-208ENST00000555905 OARD1Q9Y530 152 aa10.78□□□□□ -0.68
TMEM260-208ENST00000555905 R4GN57 208 aa10.78□□□□□ -0.68
TMEM260-208ENST00000555905 TDRD6O60522 2096 aaKnown RBP10.77□□□□□ -0.69
TMEM260-208ENST00000555905 PRR19A6NJB7 356 aa10.77□□□□□ -0.69
TMEM260-208ENST00000555905 BIRC5O15392 142 aa10.77□□□□□ -0.69
TMEM260-208ENST00000555905 PSIP1O75475 530 aaKnown RBP10.77□□□□□ -0.69
TMEM260-208ENST00000555905 DHRS4L1P0CG22 281 aa10.77□□□□□ -0.69
TMEM260-208ENST00000555905 GFAPP14136 432 aa10.77□□□□□ -0.69
TMEM260-208ENST00000555905 SLC2A4P14672 509 aa10.77□□□□□ -0.69
TMEM260-208ENST00000555905 AK4P27144 223 aaPredicted RBP10.77□□□□□ -0.69
TMEM260-208ENST00000555905 ACADLP28330 430 aa10.77□□□□□ -0.69
TMEM260-208ENST00000555905 CTSKP43235 329 aa10.77□□□□□ -0.69
TMEM260-208ENST00000555905 ARRB1P49407 418 aaPredicted RBP10.77□□□□□ -0.69
TMEM260-208ENST00000555905 WDR4P57081 412 aaKnown RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms