RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 PLOD1Q02809 727 aaPredicted RBP12.34□□□□□ -0.43
HNRNPC-221ENST00000555883 KLRB1Q12918 225 aa12.34□□□□□ -0.43
HNRNPC-221ENST00000555883 BOP1Q14137 746 aaKnown RBP12.34□□□□□ -0.43
HNRNPC-221ENST00000555883 SPARCL1Q14515 664 aa12.34□□□□□ -0.43
HNRNPC-221ENST00000555883 SKIDA1Q1XH10 827 aa12.34□□□□□ -0.43
HNRNPC-221ENST00000555883 ZRANB3Q5FWF4 1079 aa12.34□□□□□ -0.43
HNRNPC-221ENST00000555883 PTRH1Q86Y79 214 aaKnown RBP12.34□□□□□ -0.43
HNRNPC-221ENST00000555883 TMEM126BQ8IUX1 230 aa12.34□□□□□ -0.43
HNRNPC-221ENST00000555883 RNF10Q8N5U6 811 aaKnown RBP12.34□□□□□ -0.43
HNRNPC-221ENST00000555883 LILRA3Q8N6C8 439 aaPredicted RBP12.34□□□□□ -0.43
HNRNPC-221ENST00000555883 OR4E2Q8NGC2 313 aa12.34□□□□□ -0.43
HNRNPC-221ENST00000555883 CPT1BQ92523 772 aa12.34□□□□□ -0.43
HNRNPC-221ENST00000555883 PEX13Q92968 403 aa12.34□□□□□ -0.43
HNRNPC-221ENST00000555883 TWSG1Q9GZX9 223 aa12.34□□□□□ -0.43
HNRNPC-221ENST00000555883 CHRNA10Q9GZZ6 450 aa12.34□□□□□ -0.43
HNRNPC-221ENST00000555883 SOHLH2Q9NX45 425 aa12.34□□□□□ -0.43
HNRNPC-221ENST00000555883 COL12A1Q99715 3063 aa12.34□□□□□ -0.43
HNRNPC-221ENST00000555883 FLNCQ14315 2725 aa12.33□□□□□ -0.44
HNRNPC-221ENST00000555883 RELNP78509 3460 aa12.33□□□□□ -0.44
HNRNPC-221ENST00000555883 C2orf74A8MZ97 194 aa12.33□□□□□ -0.44
HNRNPC-221ENST00000555883 MAP3K7O43318 606 aa12.33□□□□□ -0.44
HNRNPC-221ENST00000555883 SUN1O94901 812 aa12.33□□□□□ -0.44
HNRNPC-221ENST00000555883 FTH1P02794 183 aa12.33□□□□□ -0.44
HNRNPC-221ENST00000555883 NTRK1P04629 796 aa12.33□□□□□ -0.44
HNRNPC-221ENST00000555883 KLK3P07288 261 aaPredicted RBP12.33□□□□□ -0.44
HNRNPC-221ENST00000555883 POLR2CP19387 275 aaPredicted RBP12.33□□□□□ -0.44
HNRNPC-221ENST00000555883 CDH3P22223 829 aa12.33□□□□□ -0.44
HNRNPC-221ENST00000555883 PRDX3P30048 256 aaKnown RBP12.33□□□□□ -0.44
HNRNPC-221ENST00000555883 CDC25BP30305 580 aa12.33□□□□□ -0.44
HNRNPC-221ENST00000555883 CDKN1CP49918 316 aaPredicted RBP12.33□□□□□ -0.44
HNRNPC-221ENST00000555883 GDF10P55107 478 aa12.33□□□□□ -0.44
HNRNPC-221ENST00000555883 FOXK1P85037 733 aa12.33□□□□□ -0.44
HNRNPC-221ENST00000555883 CDH17Q12864 832 aa12.33□□□□□ -0.44
HNRNPC-221ENST00000555883 SEMA5AQ13591 1074 aa12.33□□□□□ -0.44
HNRNPC-221ENST00000555883 POU6F1Q14863 301 aa12.33□□□□□ -0.44
HNRNPC-221ENST00000555883 GPR19Q15760 415 aa12.33□□□□□ -0.44
HNRNPC-221ENST00000555883 DBN1Q16643 649 aa12.33□□□□□ -0.44
HNRNPC-221ENST00000555883 LYPLAL1Q5VWZ2 237 aa12.33□□□□□ -0.44
HNRNPC-221ENST00000555883 CERS6Q6ZMG9 384 aa12.33□□□□□ -0.44
HNRNPC-221ENST00000555883 AMIGO1Q86WK6 493 aa12.33□□□□□ -0.44
HNRNPC-221ENST00000555883 PIANPQ8IYJ0 282 aa12.33□□□□□ -0.44
HNRNPC-221ENST00000555883 OR52E1Q8NGJ3 308 aa12.33□□□□□ -0.44
HNRNPC-221ENST00000555883 NAT14Q8WUY8 206 aa12.33□□□□□ -0.44
HNRNPC-221ENST00000555883 TFGQ92734 400 aaPredicted RBP12.33□□□□□ -0.44
HNRNPC-221ENST00000555883 SGSM3Q96HU1 749 aa12.33□□□□□ -0.44
HNRNPC-221ENST00000555883 ALS2CR12Q96Q35 445 aa12.33□□□□□ -0.44
HNRNPC-221ENST00000555883 FERD3LQ96RJ6 166 aa12.33□□□□□ -0.44
HNRNPC-221ENST00000555883 DPH2Q9BQC3 489 aaPredicted RBP12.33□□□□□ -0.44
HNRNPC-221ENST00000555883 TMEM121Q9BTD3 319 aa12.33□□□□□ -0.44
HNRNPC-221ENST00000555883 FAM96AQ9H5X1 160 aa12.33□□□□□ -0.44
HNRNPC-221ENST00000555883 ZNF71Q9NQZ8 489 aaPredicted RBP12.33□□□□□ -0.44
HNRNPC-221ENST00000555883 FAM8A1Q9UBU6 413 aa12.33□□□□□ -0.44
HNRNPC-221ENST00000555883 FARSAQ9Y285 508 aaKnown RBP12.33□□□□□ -0.44
HNRNPC-221ENST00000555883 TP53TG5Q9Y2B4 290 aa12.33□□□□□ -0.44
HNRNPC-221ENST00000555883 MAN2B2Q9Y2E5 1009 aa12.33□□□□□ -0.44
HNRNPC-221ENST00000555883 R3HDM2Q9Y2K5 976 aaKnown RBP12.33□□□□□ -0.44
HNRNPC-221ENST00000555883 CDC14CA4D256 554 aa12.32□□□□□ -0.44
HNRNPC-221ENST00000555883 SLC9B1P1A6NJY1 282 aa12.32□□□□□ -0.44
HNRNPC-221ENST00000555883 F8W8V4 182 aa12.32□□□□□ -0.44
HNRNPC-221ENST00000555883 MEN1O00255 615 aa12.32□□□□□ -0.44
HNRNPC-221ENST00000555883 BTN3A1O00481 513 aa12.32□□□□□ -0.44
HNRNPC-221ENST00000555883 CCL22O00626 93 aa12.32□□□□□ -0.44
HNRNPC-221ENST00000555883 ARHGAP6O43182 974 aa12.32□□□□□ -0.44
HNRNPC-221ENST00000555883 GAS8O95995 478 aa12.32□□□□□ -0.44
HNRNPC-221ENST00000555883 ATXN8OSP0DMR3 200 aa12.32□□□□□ -0.44
HNRNPC-221ENST00000555883 MSNP26038 577 aaKnown RBP12.32□□□□□ -0.44
HNRNPC-221ENST00000555883 PDHA2P29803 388 aa12.32□□□□□ -0.44
HNRNPC-221ENST00000555883 SHMT2P34897 504 aa12.32□□□□□ -0.44
HNRNPC-221ENST00000555883 RORAP35398 523 aa12.32□□□□□ -0.44
HNRNPC-221ENST00000555883 FDFT1P37268 417 aa12.32□□□□□ -0.44
HNRNPC-221ENST00000555883 ACVR1Q04771 509 aa12.32□□□□□ -0.44
HNRNPC-221ENST00000555883 GPS2Q13227 327 aa12.32□□□□□ -0.44
HNRNPC-221ENST00000555883 OASLQ15646 514 aaKnown RBP12.32□□□□□ -0.44
HNRNPC-221ENST00000555883 ZNF789Q5FWF6 425 aa12.32□□□□□ -0.44
HNRNPC-221ENST00000555883 TAS2R42Q7RTR8 314 aa12.32□□□□□ -0.44
HNRNPC-221ENST00000555883 TBC1D21Q8IYX1 336 aa12.32□□□□□ -0.44
HNRNPC-221ENST00000555883 ADGRF3Q8IZF5 1079 aa12.32□□□□□ -0.44
HNRNPC-221ENST00000555883 DSELQ8IZU8 1212 aa12.32□□□□□ -0.44
HNRNPC-221ENST00000555883 CLDN19Q8N6F1 224 aa12.32□□□□□ -0.44
HNRNPC-221ENST00000555883 SLC38A9Q8NBW4 561 aa12.32□□□□□ -0.44
HNRNPC-221ENST00000555883 RANBP9Q96S59 729 aa12.32□□□□□ -0.44
HNRNPC-221ENST00000555883 NLNQ9BYT8 704 aa12.32□□□□□ -0.44
HNRNPC-221ENST00000555883 AKIRIN1Q9H9L7 192 aaPredicted RBP12.32□□□□□ -0.44
HNRNPC-221ENST00000555883 MLXIPLQ9NP71 852 aa12.32□□□□□ -0.44
HNRNPC-221ENST00000555883 POLG2Q9UHN1 485 aa12.32□□□□□ -0.44
HNRNPC-221ENST00000555883 SERTAD3Q9UJW9 196 aa12.32□□□□□ -0.44
HNRNPC-221ENST00000555883 PACSIN2Q9UNF0 486 aaPredicted RBP12.32□□□□□ -0.44
HNRNPC-221ENST00000555883 PCDHGA9Q9Y5G4 932 aaKnown RBP12.32□□□□□ -0.44
HNRNPC-221ENST00000555883 HEATR9A2RTY3 570 aa12.31□□□□□ -0.44
HNRNPC-221ENST00000555883 GSAPA4D1B5 854 aa12.31□□□□□ -0.44
HNRNPC-221ENST00000555883 BTN3A3O00478 584 aa12.31□□□□□ -0.44
HNRNPC-221ENST00000555883 KDM1AO60341 852 aa12.31□□□□□ -0.44
HNRNPC-221ENST00000555883 FTCDO95954 541 aa12.31□□□□□ -0.44
HNRNPC-221ENST00000555883 HBQ1P09105 142 aa12.31□□□□□ -0.44
HNRNPC-221ENST00000555883 TPH1P17752 444 aa12.31□□□□□ -0.44
HNRNPC-221ENST00000555883 ACADLP28330 430 aa12.31□□□□□ -0.44
HNRNPC-221ENST00000555883 FOXN2P32314 431 aa12.31□□□□□ -0.44
HNRNPC-221ENST00000555883 PREPP48147 710 aa12.31□□□□□ -0.44
HNRNPC-221ENST00000555883 ABRQ12979 859 aa12.31□□□□□ -0.44
HNRNPC-221ENST00000555883 PLEKHS1Q5SXH7 462 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms