RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 CPNE7Q9UBL6 633 aa12.39□□□□□ -0.43
SYNE2-219ENST00000555323 FAM8A1Q9UBU6 413 aa12.39□□□□□ -0.43
SYNE2-219ENST00000555323 SLC39A10Q9ULF5 831 aa12.39□□□□□ -0.43
SYNE2-219ENST00000555323 PADI4Q9UM07 663 aa12.39□□□□□ -0.43
SYNE2-219ENST00000555323 PSMD13Q9UNM6 376 aa12.39□□□□□ -0.43
SYNE2-219ENST00000555323 NFS1Q9Y697 457 aa12.39□□□□□ -0.43
SYNE2-219ENST00000555323 TRBV23OR9-2A0A075B6M9 112 aa12.38□□□□□ -0.43
SYNE2-219ENST00000555323 OR52A4PA6NMU1 304 aa12.38□□□□□ -0.43
SYNE2-219ENST00000555323 B4DGG1 531 aa12.38□□□□□ -0.43
SYNE2-219ENST00000555323 GFYI3L273 518 aa12.38□□□□□ -0.43
SYNE2-219ENST00000555323 IFRD1O00458 451 aaPredicted RBP12.38□□□□□ -0.43
SYNE2-219ENST00000555323 PPM1DO15297 605 aa12.38□□□□□ -0.43
SYNE2-219ENST00000555323 TNFSF14O43557 240 aa12.38□□□□□ -0.43
SYNE2-219ENST00000555323 TSPAN12O95859 305 aa12.38□□□□□ -0.43
SYNE2-219ENST00000555323 SNRPAP09012 282 aaKnown RBP12.38□□□□□ -0.43
SYNE2-219ENST00000555323 MTHFD1P11586 935 aaKnown RBP12.38□□□□□ -0.43
SYNE2-219ENST00000555323 H2AFXP16104 143 aaPredicted RBP12.38□□□□□ -0.43
SYNE2-219ENST00000555323 STMN1P16949 149 aa12.38□□□□□ -0.43
SYNE2-219ENST00000555323 ZNF37AP17032 561 aaPredicted RBP12.38□□□□□ -0.43
SYNE2-219ENST00000555323 NDUFS1P28331 727 aa12.38□□□□□ -0.43
SYNE2-219ENST00000555323 CRABP2P29373 138 aa12.38□□□□□ -0.43
SYNE2-219ENST00000555323 SLC26A3P40879 764 aa12.38□□□□□ -0.43
SYNE2-219ENST00000555323 MAGEA12P43365 314 aa12.38□□□□□ -0.43
SYNE2-219ENST00000555323 MAPK9P45984 424 aa12.38□□□□□ -0.43
SYNE2-219ENST00000555323 RGS4P49798 205 aa12.38□□□□□ -0.43
SYNE2-219ENST00000555323 SLC12A2P55011 1212 aa12.38□□□□□ -0.43
SYNE2-219ENST00000555323 RAB10P61026 200 aa12.38□□□□□ -0.43
SYNE2-219ENST00000555323 PDAP1Q13442 181 aaKnown RBP12.38□□□□□ -0.43
SYNE2-219ENST00000555323 SEPT7Q16181 437 aaKnown RBP12.38□□□□□ -0.43
SYNE2-219ENST00000555323 MROH9Q5TGP6 573 aa12.38□□□□□ -0.43
SYNE2-219ENST00000555323 UNC5DQ6UXZ4 953 aa12.38□□□□□ -0.43
SYNE2-219ENST00000555323 ZNF438Q7Z4V0 828 aa12.38□□□□□ -0.43
SYNE2-219ENST00000555323 CCDC91Q7Z6B0 441 aa12.38□□□□□ -0.43
SYNE2-219ENST00000555323 PIM3Q86V86 326 aa12.38□□□□□ -0.43
SYNE2-219ENST00000555323 RBM12BQ8IXT5 1001 aaKnown RBP12.38□□□□□ -0.43
SYNE2-219ENST00000555323 CPNE9Q8IYJ1 553 aa12.38□□□□□ -0.43
SYNE2-219ENST00000555323 TBC1D21Q8IYX1 336 aa12.38□□□□□ -0.43
SYNE2-219ENST00000555323 KYQ8NBH2 561 aa12.38□□□□□ -0.43
SYNE2-219ENST00000555323 SH3KBP1Q96B97 665 aa12.38□□□□□ -0.43
SYNE2-219ENST00000555323 MTBPQ96DY7 904 aa12.38□□□□□ -0.43
SYNE2-219ENST00000555323 CNDP2Q96KP4 475 aaKnown RBP12.38□□□□□ -0.43
SYNE2-219ENST00000555323 UBXN10Q96LJ8 280 aa12.38□□□□□ -0.43
SYNE2-219ENST00000555323 C12orf66Q96MD2 445 aa12.38□□□□□ -0.43
SYNE2-219ENST00000555323 MVB12BQ9H7P6 319 aa12.38□□□□□ -0.43
SYNE2-219ENST00000555323 EVA1BQ9NVM1 165 aa12.38□□□□□ -0.43
SYNE2-219ENST00000555323 SIRPGQ9P1W8 387 aa12.38□□□□□ -0.43
SYNE2-219ENST00000555323 HEBP2Q9Y5Z4 205 aa12.38□□□□□ -0.43
SYNE2-219ENST00000555323 COLEC10Q9Y6Z7 277 aa12.38□□□□□ -0.43
SYNE2-219ENST00000555323 COL5A1P20908 1838 aaPredicted RBP12.38□□□□□ -0.43
SYNE2-219ENST00000555323 GVINP1Q7Z2Y8 2422 aa12.38□□□□□ -0.43
SYNE2-219ENST00000555323 KRT37O76014 449 aa12.37□□□□□ -0.43
SYNE2-219ENST00000555323 VIPP01282 170 aa12.37□□□□□ -0.43
SYNE2-219ENST00000555323 ALDOAP04075 364 aaKnown RBP12.37□□□□□ -0.43
SYNE2-219ENST00000555323 GP1BAP07359 652 aa12.37□□□□□ -0.43
SYNE2-219ENST00000555323 CEACAM1P13688 526 aa12.37□□□□□ -0.43
SYNE2-219ENST00000555323 GPR3P46089 330 aa12.37□□□□□ -0.43
SYNE2-219ENST00000555323 PGGT1BP53609 377 aa12.37□□□□□ -0.43
SYNE2-219ENST00000555323 MAZP56270 477 aaKnown RBP12.37□□□□□ -0.43
SYNE2-219ENST00000555323 IL2P60568 153 aa12.37□□□□□ -0.43
SYNE2-219ENST00000555323 HHEXQ03014 270 aa12.37□□□□□ -0.43
SYNE2-219ENST00000555323 TAOK1Q7L7X3 1001 aa12.37□□□□□ -0.43
SYNE2-219ENST00000555323 NKAPQ8N5F7 415 aaKnown RBP12.37□□□□□ -0.43
SYNE2-219ENST00000555323 OR5K2Q8NHB8 316 aa12.37□□□□□ -0.43
SYNE2-219ENST00000555323 EEF1AKMT1Q8WVE0 214 aa12.37□□□□□ -0.43
SYNE2-219ENST00000555323 ASB11Q8WXH4 323 aa12.37□□□□□ -0.43
SYNE2-219ENST00000555323 NAT6Q93015 286 aa12.37□□□□□ -0.43
SYNE2-219ENST00000555323 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.37□□□□□ -0.43
SYNE2-219ENST00000555323 SLC32A1Q9H598 525 aa12.37□□□□□ -0.43
SYNE2-219ENST00000555323 CAB39LQ9H9S4 337 aa12.37□□□□□ -0.43
SYNE2-219ENST00000555323 GPAMQ9HCL2 828 aa12.37□□□□□ -0.43
SYNE2-219ENST00000555323 LRIT1Q9P2V4 623 aa12.37□□□□□ -0.43
SYNE2-219ENST00000555323 PSMC3IPQ9P2W1 217 aaPredicted RBP12.37□□□□□ -0.43
SYNE2-219ENST00000555323 FTSJ1Q9UET6 329 aa12.37□□□□□ -0.43
SYNE2-219ENST00000555323 ZFC3H1O60293 1989 aaKnown RBP12.37□□□□□ -0.43
SYNE2-219ENST00000555323 IQANK1A0A1B0GTG1 560 aa12.36□□□□□ -0.43
SYNE2-219ENST00000555323 PCNX2A6NKB5 2137 aa12.36□□□□□ -0.43
SYNE2-219ENST00000555323 RASGRF2O14827 1237 aa12.36□□□□□ -0.43
SYNE2-219ENST00000555323 CDH16O75309 829 aa12.36□□□□□ -0.43
SYNE2-219ENST00000555323 PSIP1O75475 530 aaKnown RBP12.36□□□□□ -0.43
SYNE2-219ENST00000555323 DKK1O94907 266 aa12.36□□□□□ -0.43
SYNE2-219ENST00000555323 C1orf105O95561 183 aa12.36□□□□□ -0.43
SYNE2-219ENST00000555323 C2P06681 752 aa12.36□□□□□ -0.43
SYNE2-219ENST00000555323 SLC35E2BP0CK96 405 aa12.36□□□□□ -0.43
SYNE2-219ENST00000555323 MYF5P13349 255 aa12.36□□□□□ -0.43
SYNE2-219ENST00000555323 SAT1P21673 171 aa12.36□□□□□ -0.43
SYNE2-219ENST00000555323 TYK2P29597 1187 aa12.36□□□□□ -0.43
SYNE2-219ENST00000555323 ABRQ12979 859 aa12.36□□□□□ -0.43
SYNE2-219ENST00000555323 ILKQ13418 452 aa12.36□□□□□ -0.43
SYNE2-219ENST00000555323 SQSTM1Q13501 440 aa12.36□□□□□ -0.43
SYNE2-219ENST00000555323 BMPR2Q13873 1038 aa12.36□□□□□ -0.43
SYNE2-219ENST00000555323 TRIP6Q15654 476 aaKnown RBP12.36□□□□□ -0.43
SYNE2-219ENST00000555323 GUSBP11Q6P575 273 aa12.36□□□□□ -0.43
SYNE2-219ENST00000555323 TMEM26Q6ZUK4 368 aa12.36□□□□□ -0.43
SYNE2-219ENST00000555323 SPNS2Q8IVW8 549 aa12.36□□□□□ -0.43
SYNE2-219ENST00000555323 RIBC1Q8N443 379 aaPredicted RBP12.36□□□□□ -0.43
SYNE2-219ENST00000555323 FBXO15Q8NCQ5 510 aaPredicted RBP12.36□□□□□ -0.43
SYNE2-219ENST00000555323 PHC3Q8NDX5 983 aa12.36□□□□□ -0.43
SYNE2-219ENST00000555323 OR2W6PQ8NHA6 318 aa12.36□□□□□ -0.43
SYNE2-219ENST00000555323 MZB1Q8WU39 189 aa12.36□□□□□ -0.43
SYNE2-219ENST00000555323 ANKRD49Q8WVL7 239 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms