RNA–Protein interactions for RNA: ENST00000554947.5

SDR39U1-209, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,203 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-209ENST00000554947 EPHA6Q9UF33 1036 aa23.62■■□□□ 1.37
SDR39U1-209ENST00000554947 DMGDHQ9UI17 866 aaKnown RBP23.62■■□□□ 1.37
SDR39U1-209ENST00000554947 SLC24A2Q9UI40 661 aa23.62■■□□□ 1.37
SDR39U1-209ENST00000554947 CCDC187A0A096LP49 1063 aa23.61■■□□□ 1.37
SDR39U1-209ENST00000554947 ESYT3A0FGR9 886 aa23.61■■□□□ 1.37
SDR39U1-209ENST00000554947 TRABD2BA6NFA1 517 aa23.61■■□□□ 1.37
SDR39U1-209ENST00000554947 E5RI56 91 aa23.61■■□□□ 1.37
SDR39U1-209ENST00000554947 HAUS5O94927 633 aa23.61■■□□□ 1.37
SDR39U1-209ENST00000554947 CAPZBP47756 277 aa23.61■■□□□ 1.37
SDR39U1-209ENST00000554947 CARSP49589 748 aaKnown RBP23.61■■□□□ 1.37
SDR39U1-209ENST00000554947 MPP1Q00013 466 aa23.61■■□□□ 1.37
SDR39U1-209ENST00000554947 ILF2Q12905 390 aaKnown RBP23.61■■□□□ 1.37
SDR39U1-209ENST00000554947 GBX1Q14549 363 aa23.61■■□□□ 1.37
SDR39U1-209ENST00000554947 DUS1LQ6P1R4 473 aaKnown RBP23.61■■□□□ 1.37
SDR39U1-209ENST00000554947 TRMT10BQ6PF06 316 aaKnown RBP23.61■■□□□ 1.37
SDR39U1-209ENST00000554947 PALM2Q8IXS6 379 aa23.61■■□□□ 1.37
SDR39U1-209ENST00000554947 TBC1D21Q8IYX1 336 aa23.61■■□□□ 1.37
SDR39U1-209ENST00000554947 NCSTNQ92542 709 aa23.61■■□□□ 1.37
SDR39U1-209ENST00000554947 FERD3LQ96RJ6 166 aa23.61■■□□□ 1.37
SDR39U1-209ENST00000554947 NSMCE4AQ9NXX6 385 aa23.61■■□□□ 1.37
SDR39U1-209ENST00000554947 DKK4Q9UBT3 224 aa23.61■■□□□ 1.37
SDR39U1-209ENST00000554947 POLG2Q9UHN1 485 aa23.61■■□□□ 1.37
SDR39U1-209ENST00000554947 CORO1CQ9ULV4 474 aaPredicted RBP23.61■■□□□ 1.37
SDR39U1-209ENST00000554947 MN1Q10571 1320 aaPredicted RBP23.6■■□□□ 1.37
SDR39U1-209ENST00000554947 IGHV5-10-1A0A0J9YXX1 117 aa23.6■■□□□ 1.37
SDR39U1-209ENST00000554947 HGSO14964 777 aaPredicted RBP23.6■■□□□ 1.37
SDR39U1-209ENST00000554947 NIPSNAP2O75323 286 aa23.6■■□□□ 1.37
SDR39U1-209ENST00000554947 THRAP10827 490 aa23.6■■□□□ 1.37
SDR39U1-209ENST00000554947 HOXB3P14651 431 aaPredicted RBP23.6■■□□□ 1.37
SDR39U1-209ENST00000554947 CHRM3P20309 590 aa23.6■■□□□ 1.37
SDR39U1-209ENST00000554947 PLCL1Q15111 1095 aa23.6■■□□□ 1.37
SDR39U1-209ENST00000554947 ZNF549Q6P9A3 640 aa23.6■■□□□ 1.37
SDR39U1-209ENST00000554947 CNSTQ6PJW8 725 aa23.6■■□□□ 1.37
SDR39U1-209ENST00000554947 IGF2-ASQ6U949 168 aa23.6■■□□□ 1.37
SDR39U1-209ENST00000554947 NAPRTQ6XQN6 538 aa23.6■■□□□ 1.37
SDR39U1-209ENST00000554947 OR5K2Q8NHB8 316 aa23.6■■□□□ 1.37
SDR39U1-209ENST00000554947 WDR36Q8NI36 951 aaKnown RBP23.6■■□□□ 1.37
SDR39U1-209ENST00000554947 AARSD1Q9BTE6 412 aaKnown RBP23.6■■□□□ 1.37
SDR39U1-209ENST00000554947 TRIT1Q9H3H1 467 aaKnown RBP23.6■■□□□ 1.37
SDR39U1-209ENST00000554947 SEMA6CQ9H3T2 930 aa23.6■■□□□ 1.37
SDR39U1-209ENST00000554947 TFB2MQ9H5Q4 396 aaKnown RBP23.6■■□□□ 1.37
SDR39U1-209ENST00000554947 ZFATQ9P243 1243 aa23.6■■□□□ 1.37
SDR39U1-209ENST00000554947 MTRF1LQ9UGC7 380 aaKnown RBP23.6■■□□□ 1.37
SDR39U1-209ENST00000554947 ASF1AQ9Y294 204 aa23.6■■□□□ 1.37
SDR39U1-209ENST00000554947 PCDHGA8Q9Y5G5 932 aa23.6■■□□□ 1.37
SDR39U1-209ENST00000554947 AKAP13Q12802 2813 aa23.6■■□□□ 1.37
SDR39U1-209ENST00000554947 TPRP12270 2363 aaKnown RBP23.59■■□□□ 1.37
SDR39U1-209ENST00000554947 TMEM8BA6NDV4 472 aa23.59■■□□□ 1.37
SDR39U1-209ENST00000554947 C9P02748 559 aa23.59■■□□□ 1.37
SDR39U1-209ENST00000554947 AHSGP02765 367 aa23.59■■□□□ 1.37
SDR39U1-209ENST00000554947 RPN2P04844 631 aa23.59■■□□□ 1.37
SDR39U1-209ENST00000554947 CD9P21926 228 aa23.59■■□□□ 1.37
SDR39U1-209ENST00000554947 MLLT3P42568 568 aaPredicted RBP23.59■■□□□ 1.37
SDR39U1-209ENST00000554947 MAPK9P45984 424 aa23.59■■□□□ 1.37
SDR39U1-209ENST00000554947 LSSP48449 732 aa23.59■■□□□ 1.37
SDR39U1-209ENST00000554947 PPM1FP49593 454 aaPredicted RBP23.59■■□□□ 1.37
SDR39U1-209ENST00000554947 CLCN7P51798 805 aa23.59■■□□□ 1.37
SDR39U1-209ENST00000554947 UNQ6494/PRO21346Q6UXR6 183 aa23.59■■□□□ 1.37
SDR39U1-209ENST00000554947 UNC5DQ6UXZ4 953 aa23.59■■□□□ 1.37
SDR39U1-209ENST00000554947 SLC26A11Q86WA9 606 aa23.59■■□□□ 1.37
SDR39U1-209ENST00000554947 VRK3Q8IV63 474 aa23.59■■□□□ 1.37
SDR39U1-209ENST00000554947 ZMYND15Q9H091 742 aa23.59■■□□□ 1.37
SDR39U1-209ENST00000554947 POLR1BQ9H9Y6 1135 aa23.59■■□□□ 1.37
SDR39U1-209ENST00000554947 TOX3O15405 576 aaPredicted RBP23.58■■□□□ 1.37
SDR39U1-209ENST00000554947 KDM1AO60341 852 aa23.58■■□□□ 1.37
SDR39U1-209ENST00000554947 SPAG6O75602 509 aa23.58■■□□□ 1.37
SDR39U1-209ENST00000554947 TYRP1P17643 537 aa23.58■■□□□ 1.37
SDR39U1-209ENST00000554947 GABRB3P28472 473 aa23.58■■□□□ 1.37
SDR39U1-209ENST00000554947 MAGEA4P43358 317 aa23.58■■□□□ 1.37
SDR39U1-209ENST00000554947 CSE1LP55060 971 aaKnown RBP23.58■■□□□ 1.37
SDR39U1-209ENST00000554947 TTLL9Q3SXZ7 439 aa23.58■■□□□ 1.37
SDR39U1-209ENST00000554947 PHF19Q5T6S3 580 aa23.58■■□□□ 1.37
SDR39U1-209ENST00000554947 UGT3A1Q6NUS8 523 aa23.58■■□□□ 1.37
SDR39U1-209ENST00000554947 LSMEM2Q8N112 164 aa23.58■■□□□ 1.37
SDR39U1-209ENST00000554947 ZBTB2Q8N680 514 aa23.58■■□□□ 1.37
SDR39U1-209ENST00000554947 PHC3Q8NDX5 983 aa23.58■■□□□ 1.37
SDR39U1-209ENST00000554947 ZDHHC12Q96GR4 267 aa23.58■■□□□ 1.37
SDR39U1-209ENST00000554947 CCDC74BQ96LY2 380 aa23.58■■□□□ 1.37
SDR39U1-209ENST00000554947 CMKLR1Q99788 373 aa23.58■■□□□ 1.37
SDR39U1-209ENST00000554947 AKAP7Q9P0M2 348 aaPredicted RBP23.58■■□□□ 1.37
SDR39U1-209ENST00000554947 MED16Q9Y2X0 877 aa23.58■■□□□ 1.37
SDR39U1-209ENST00000554947 EIF3FO00303 357 aaPredicted RBP23.57■■□□□ 1.36
SDR39U1-209ENST00000554947 DXOO77932 396 aaKnown RBP23.57■■□□□ 1.36
SDR39U1-209ENST00000554947 ANKRD34CP0C6C1 535 aa23.57■■□□□ 1.36
SDR39U1-209ENST00000554947 CUL1Q13616 776 aa23.57■■□□□ 1.36
SDR39U1-209ENST00000554947 NEK10Q6ZWH5 1172 aa23.57■■□□□ 1.36
SDR39U1-209ENST00000554947 ARHGAP22Q7Z5H3 698 aa23.57■■□□□ 1.36
SDR39U1-209ENST00000554947 CCDC25Q86WR0 208 aa23.57■■□□□ 1.36
SDR39U1-209ENST00000554947 OOSP2Q86WS3 158 aa23.57■■□□□ 1.36
SDR39U1-209ENST00000554947 RELL1Q8IUW5 271 aa23.57■■□□□ 1.36
SDR39U1-209ENST00000554947 LCN9Q8WX39 176 aa23.57■■□□□ 1.36
SDR39U1-209ENST00000554947 RSC1A1Q92681 617 aa23.57■■□□□ 1.36
SDR39U1-209ENST00000554947 TMEM9Q9P0T7 183 aa23.57■■□□□ 1.36
SDR39U1-209ENST00000554947 SATB2Q9UPW6 733 aa23.57■■□□□ 1.36
SDR39U1-209ENST00000554947 DHRS7Q9Y394 339 aa23.57■■□□□ 1.36
SDR39U1-209ENST00000554947 OR5K3A6NET4 321 aa23.56■■□□□ 1.36
SDR39U1-209ENST00000554947 MATN2O00339 956 aa23.56■■□□□ 1.36
SDR39U1-209ENST00000554947 CAPN5O15484 640 aaPredicted RBP23.56■■□□□ 1.36
SDR39U1-209ENST00000554947 VPS26AO75436 327 aa23.56■■□□□ 1.36
SDR39U1-209ENST00000554947 SSTR1P30872 391 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms