RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 TAF5LO75529 589 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 SLC22A3O75751 556 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 SERPINI2O75830 405 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 IDH1O75874 414 aaKnown RBP4.37□□□□□ -1.71
ATXN3-227ENST00000554491 SUN1O94901 812 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 CDK14O94921 469 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 RAB4AP20338 218 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 ATP5F1P24539 256 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-227ENST00000554491 MAPK3P27361 379 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-227ENST00000554491 NMT1P30419 496 aaKnown RBP4.37□□□□□ -1.71
ATXN3-227ENST00000554491 HOXA11P31270 313 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-227ENST00000554491 RRM2P31350 389 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 STX2P32856 288 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 CDH5P33151 784 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-227ENST00000554491 BMI1P35226 326 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 CPA2P48052 419 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 KCNJ5P48544 419 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 HOXA1P49639 335 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-227ENST00000554491 AK2P54819 239 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 PSMD4P55036 377 aaKnown RBP4.37□□□□□ -1.71
ATXN3-227ENST00000554491 NUP107P57740 925 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 YWHAEP62258 255 aaKnown RBP4.37□□□□□ -1.71
ATXN3-227ENST00000554491 NOMO3P69849 1222 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 ABATP80404 500 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 MRPS9P82933 396 aaKnown RBP4.37□□□□□ -1.71
ATXN3-227ENST00000554491 TCF15Q12870 199 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 NAB1Q13506 487 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 ARHGAP19Q14CB8 494 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 NOMO1Q15155 1222 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 DHCR24Q15392 516 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 DUSP7Q16829 419 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 PFKFB4Q16877 469 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 LRRC36Q1X8D7 754 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 ALG11Q2TAA5 492 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 GFOD2Q3B7J2 385 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 ADCK5Q3MIX3 580 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 ZACNQ401N2 412 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 SLC39A12Q504Y0 691 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 FSCBQ5H9T9 825 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 NOMO2Q5JPE7 1267 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 TEX30Q5JUR7 227 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 TMEM240Q5SV17 173 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 GPATCH4Q5T3I0 446 aaKnown RBP4.37□□□□□ -1.71
ATXN3-227ENST00000554491 GPR139Q6DWJ6 353 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 APOBEC3HQ6NTF7 200 aaKnown RBP4.37□□□□□ -1.71
ATXN3-227ENST00000554491 FOXR2Q6PJQ5 311 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 LRIG3Q6UXM1 1119 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 CCNI2Q6ZMN8 369 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-227ENST00000554491 TRIM72Q6ZMU5 477 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 TPGS1Q6ZTW0 290 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 TMTC3Q6ZXV5 915 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 NIPA1Q7RTP0 329 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 BHLHA9Q7RTU4 235 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 GSTA5Q7RTV2 222 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 KCNK18Q7Z418 384 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 HDDC2Q7Z4H3 204 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 FJX1Q86VR8 437 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 HPS6Q86YV9 775 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 ZDHHC17Q8IUH5 632 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 ERI1Q8IV48 349 aaKnown RBP4.37□□□□□ -1.71
ATXN3-227ENST00000554491 VSTM4Q8IW00 320 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 BBS7Q8IWZ6 715 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 TCEAL8Q8IYN2 117 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 DCP1BQ8IZD4 617 aaKnown RBP4.37□□□□□ -1.71
ATXN3-227ENST00000554491 CLYBLQ8N0X4 340 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 PYROXD2Q8N2H3 581 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 PI4KAP1Q8N8J0 262 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 ZNF527Q8NB42 609 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 C11orf65Q8NCR3 313 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 SLC44A5Q8NCS7 719 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 HUS1BQ8NHY5 278 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 NCOA7Q8NI08 942 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 GRPEL2Q8TAA5 225 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 SETD7Q8WTS6 366 aaKnown RBP4.37□□□□□ -1.71
ATXN3-227ENST00000554491 SCARB1Q8WTV0 552 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 LPGAT1Q92604 370 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 NMD3Q96D46 503 aaKnown RBP4.37□□□□□ -1.71
ATXN3-227ENST00000554491 OMA1Q96E52 524 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 EDC3Q96F86 508 aaKnown RBP4.37□□□□□ -1.71
ATXN3-227ENST00000554491 AHCYL2Q96HN2 611 aaKnown RBP4.37□□□□□ -1.71
ATXN3-227ENST00000554491 PRICKLE1Q96MT3 831 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-227ENST00000554491 XPO6Q96QU8 1125 aaKnown RBP4.37□□□□□ -1.71
ATXN3-227ENST00000554491 C17orf80Q9BSJ5 609 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 DDX23Q9BUQ8 820 aaKnown RBP4.37□□□□□ -1.71
ATXN3-227ENST00000554491 C1QTNF7Q9BXJ2 289 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 ZNF717Q9BY31 904 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-227ENST00000554491 SLC29A3Q9BZD2 475 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 NUP62CLQ9H1M0 184 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 C2orf40Q9H1Z8 148 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 MTIF3Q9H2K0 278 aaKnown RBP4.37□□□□□ -1.71
ATXN3-227ENST00000554491 RHBGQ9H310 441 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 TXNRD2Q9NNW7 524 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 ZC4H2Q9NQZ6 224 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 LANCL2Q9NS86 450 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 PLK2Q9NYY3 685 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 FLRT1Q9NZU1 646 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 SLC17A6Q9P2U8 582 aa4.37□□□□□ -1.71
ATXN3-227ENST00000554491 UXTQ9UBK9 157 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-227ENST00000554491 ARPP21Q9UBL0 812 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-227ENST00000554491 DNAJB4Q9UDY4 337 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms