RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 ZNF473Q8WTR7 871 aaKnown RBP4.73□□□□□ -1.65
SCFD1-211ENST00000554437 DAZLQ92904 295 aaKnown RBP4.73□□□□□ -1.65
SCFD1-211ENST00000554437 TBC1D31Q96DN5 1066 aa4.73□□□□□ -1.65
SCFD1-211ENST00000554437 MTERF3Q96E29 417 aa4.73□□□□□ -1.65
SCFD1-211ENST00000554437 CNDP2Q96KP4 475 aaKnown RBP4.73□□□□□ -1.65
SCFD1-211ENST00000554437 ZBTB20Q9HC78 741 aaPredicted RBP4.73□□□□□ -1.65
SCFD1-211ENST00000554437 NPAP1Q9NZP6 1156 aa4.73□□□□□ -1.65
SCFD1-211ENST00000554437 CHORDC1Q9UHD1 332 aaPredicted RBP4.73□□□□□ -1.65
SCFD1-211ENST00000554437 ASTN2O75129 1339 aaPredicted RBP4.72□□□□□ -1.65
SCFD1-211ENST00000554437 SOS1Q07889 1333 aaPredicted RBP4.72□□□□□ -1.65
SCFD1-211ENST00000554437 ELOVL7A1L3X0 281 aa4.72□□□□□ -1.65
SCFD1-211ENST00000554437 FAM72CH0Y354 149 aa4.72□□□□□ -1.65
SCFD1-211ENST00000554437 PRAMEF11O60813 436 aa4.72□□□□□ -1.65
SCFD1-211ENST00000554437 CREG1O75629 220 aa4.72□□□□□ -1.65
SCFD1-211ENST00000554437 BCL10O95999 233 aa4.72□□□□□ -1.65
SCFD1-211ENST00000554437 TNNT3P45378 269 aaPredicted RBP4.72□□□□□ -1.65
SCFD1-211ENST00000554437 NR2C2P49116 596 aa4.72□□□□□ -1.65
SCFD1-211ENST00000554437 HSD17B4P51659 736 aa4.72□□□□□ -1.65
SCFD1-211ENST00000554437 HYAL1Q12794 435 aa4.72□□□□□ -1.65
SCFD1-211ENST00000554437 GRAPQ13588 217 aa4.72□□□□□ -1.65
SCFD1-211ENST00000554437 SCARB2Q14108 478 aa4.72□□□□□ -1.65
SCFD1-211ENST00000554437 RASA2Q15283 850 aa4.72□□□□□ -1.65
SCFD1-211ENST00000554437 KRTAP24-1Q3LI83 254 aa4.72□□□□□ -1.65
SCFD1-211ENST00000554437 FAM72AQ5TYM5 149 aa4.72□□□□□ -1.65
SCFD1-211ENST00000554437 PLA2G4FQ68DD2 849 aa4.72□□□□□ -1.65
SCFD1-211ENST00000554437 FAM72DQ6L9T8 149 aa4.72□□□□□ -1.65
SCFD1-211ENST00000554437 ZNF449Q6P9G9 518 aa4.72□□□□□ -1.65
SCFD1-211ENST00000554437 DGLUCYQ7Z3D6 616 aa4.72□□□□□ -1.65
SCFD1-211ENST00000554437 FAM72BQ86X60 149 aa4.72□□□□□ -1.65
SCFD1-211ENST00000554437 CEP57L1Q8IYX8 460 aa4.72□□□□□ -1.65
SCFD1-211ENST00000554437 CRYBG2Q8N1P7 616 aa4.72□□□□□ -1.65
SCFD1-211ENST00000554437 L3MBTL4Q8NA19 623 aa4.72□□□□□ -1.65
SCFD1-211ENST00000554437 PTPMT1Q8WUK0 201 aaPredicted RBP4.72□□□□□ -1.65
SCFD1-211ENST00000554437 ZFAND2BQ8WV99 257 aa4.72□□□□□ -1.65
SCFD1-211ENST00000554437 TM9SF4Q92544 642 aa4.72□□□□□ -1.65
SCFD1-211ENST00000554437 CCDC47Q96A33 483 aaKnown RBP4.72□□□□□ -1.65
SCFD1-211ENST00000554437 PGLYRP2Q96PD5 576 aa4.72□□□□□ -1.65
SCFD1-211ENST00000554437 OR6C1Q96RD1 312 aa4.72□□□□□ -1.65
SCFD1-211ENST00000554437 PSD2Q9BQI7 771 aa4.72□□□□□ -1.65
SCFD1-211ENST00000554437 MOV10L1Q9BXT6 1211 aaKnown RBP4.72□□□□□ -1.65
SCFD1-211ENST00000554437 XPO4Q9C0E2 1151 aaKnown RBP4.72□□□□□ -1.65
SCFD1-211ENST00000554437 MMP27Q9H306 513 aa4.72□□□□□ -1.65
SCFD1-211ENST00000554437 BICC1Q9H694 974 aaKnown RBP4.72□□□□□ -1.65
SCFD1-211ENST00000554437 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.72□□□□□ -1.65
SCFD1-211ENST00000554437 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.72□□□□□ -1.65
SCFD1-211ENST00000554437 ODF2LQ9ULJ1 636 aa4.72□□□□□ -1.65
SCFD1-211ENST00000554437 TMCC3Q9ULS5 477 aa4.72□□□□□ -1.65
SCFD1-211ENST00000554437 SPIN1Q9Y657 262 aaPredicted RBP4.72□□□□□ -1.65
SCFD1-211ENST00000554437 LOC102723996A0A087X1L8 192 aa4.71□□□□□ -1.66
SCFD1-211ENST00000554437 GPR75-ASB3A0A0A6YYF3 556 aa4.71□□□□□ -1.66
SCFD1-211ENST00000554437 MED19A0JLT2 244 aaPredicted RBP4.71□□□□□ -1.66
SCFD1-211ENST00000554437 A6NL46 340 aa4.71□□□□□ -1.66
SCFD1-211ENST00000554437 MAGEB17A8MXT2 336 aa4.71□□□□□ -1.66
SCFD1-211ENST00000554437 C19orf81C9J6K1 198 aa4.71□□□□□ -1.66
SCFD1-211ENST00000554437 PGM3O95394 542 aa4.71□□□□□ -1.66
SCFD1-211ENST00000554437 TPOP07202 933 aa4.71□□□□□ -1.66
SCFD1-211ENST00000554437 ADRB2P07550 413 aa4.71□□□□□ -1.66
SCFD1-211ENST00000554437 ATP6V1B1P15313 513 aa4.71□□□□□ -1.66
SCFD1-211ENST00000554437 GNAZP19086 355 aa4.71□□□□□ -1.66
SCFD1-211ENST00000554437 EPHA2P29317 976 aa4.71□□□□□ -1.66
SCFD1-211ENST00000554437 GABRA5P31644 462 aa4.71□□□□□ -1.66
SCFD1-211ENST00000554437 TIMP3P35625 211 aa4.71□□□□□ -1.66
SCFD1-211ENST00000554437 ATP6V1E1P36543 226 aa4.71□□□□□ -1.66
SCFD1-211ENST00000554437 DCTP40126 519 aa4.71□□□□□ -1.66
SCFD1-211ENST00000554437 LMAN1P49257 510 aa4.71□□□□□ -1.66
SCFD1-211ENST00000554437 RPS18P62269 152 aaKnown RBP4.71□□□□□ -1.66
SCFD1-211ENST00000554437 MFAP5Q13361 173 aa4.71□□□□□ -1.66
SCFD1-211ENST00000554437 TECRLQ5HYJ1 363 aa4.71□□□□□ -1.66
SCFD1-211ENST00000554437 WDR38Q5JTN6 314 aa4.71□□□□□ -1.66
SCFD1-211ENST00000554437 SFMBT2Q5VUG0 894 aa4.71□□□□□ -1.66
SCFD1-211ENST00000554437 SLC35E4Q6ICL7 350 aa4.71□□□□□ -1.66
SCFD1-211ENST00000554437 PLBD1Q6P4A8 553 aa4.71□□□□□ -1.66
SCFD1-211ENST00000554437 FAM47EQ6ZV65 393 aa4.71□□□□□ -1.66
SCFD1-211ENST00000554437 DNAAF5Q86Y56 855 aa4.71□□□□□ -1.66
SCFD1-211ENST00000554437 GPALPP1Q8IXQ4 340 aa4.71□□□□□ -1.66
SCFD1-211ENST00000554437 GUF1Q8N442 669 aaKnown RBP4.71□□□□□ -1.66
SCFD1-211ENST00000554437 STPG4Q8N801 248 aa4.71□□□□□ -1.66
SCFD1-211ENST00000554437 TAS1R2Q8TE23 839 aa4.71□□□□□ -1.66
SCFD1-211ENST00000554437 SECISBP2LQ93073 1101 aaKnown RBP4.71□□□□□ -1.66
SCFD1-211ENST00000554437 JAKMIP1Q96N16 626 aaKnown RBP4.71□□□□□ -1.66
SCFD1-211ENST00000554437 NEK1Q96PY6 1258 aa4.71□□□□□ -1.66
SCFD1-211ENST00000554437 C16orf70Q9BSU1 422 aa4.71□□□□□ -1.66
SCFD1-211ENST00000554437 ABHD6Q9BV23 337 aa4.71□□□□□ -1.66
SCFD1-211ENST00000554437 KRTAP2-2Q9BYT5 123 aa4.71□□□□□ -1.66
SCFD1-211ENST00000554437 GRPEL1Q9HAV7 217 aa4.71□□□□□ -1.66
SCFD1-211ENST00000554437 CPSF2Q9P2I0 782 aaKnown RBP4.71□□□□□ -1.66
SCFD1-211ENST00000554437 RHCGQ9UBD6 479 aa4.71□□□□□ -1.66
SCFD1-211ENST00000554437 TCF19Q9Y242 345 aa4.71□□□□□ -1.66
SCFD1-211ENST00000554437 PRR23AA6NEV1 266 aa4.7□□□□□ -1.66
SCFD1-211ENST00000554437 DUXAA6NLW8 204 aa4.7□□□□□ -1.66
SCFD1-211ENST00000554437 ERVV-2B6SEH9 535 aa4.7□□□□□ -1.66
SCFD1-211ENST00000554437 XRCC3O43542 346 aa4.7□□□□□ -1.66
SCFD1-211ENST00000554437 CIDEAO60543 219 aa4.7□□□□□ -1.66
SCFD1-211ENST00000554437 TBCAO75347 108 aaKnown RBP4.7□□□□□ -1.66
SCFD1-211ENST00000554437 ACP2P11117 423 aa4.7□□□□□ -1.66
SCFD1-211ENST00000554437 IL11P20809 199 aa4.7□□□□□ -1.66
SCFD1-211ENST00000554437 MT3P25713 68 aa4.7□□□□□ -1.66
SCFD1-211ENST00000554437 NNMTP40261 264 aa4.7□□□□□ -1.66
SCFD1-211ENST00000554437 ZNF131P52739 623 aa4.7□□□□□ -1.66
SCFD1-211ENST00000554437 THOP1P52888 689 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms