RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 DACT3Q96B18 629 aaPredicted RBP2.68□□□□□ -1.98
PRPF39-206ENST00000554429 CCDC127Q96BQ5 260 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 ZNF653Q96CK0 615 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 TCEAL4Q96EI5 215 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 LRRC46Q96FV0 321 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 APIPQ96GX9 242 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 INTS4Q96HW7 963 aaKnown RBP2.68□□□□□ -1.98
PRPF39-206ENST00000554429 CAPZA3Q96KX2 299 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 C7orf34Q96L11 122 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 B3GALT6Q96L58 329 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 ZSWIM3Q96MP5 696 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 TUBGCP5Q96RT8 1024 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 PKMYT1Q99640 499 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 CITED1Q99966 193 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 SEMA3CQ99985 751 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 ZFYVE21Q9BQ24 234 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 HAUS8Q9BT25 410 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 WACQ9BTA9 647 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 NUF2Q9BZD4 464 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 KLC2Q9H0B6 622 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 CXCL16Q9H2A7 254 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 CNGB3Q9NQW8 809 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 ZNF275Q9NSD4 429 aaPredicted RBP2.68□□□□□ -1.98
PRPF39-206ENST00000554429 DNAJC11Q9NVH1 559 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 SH3BP4Q9P0V3 963 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 DNAJB11Q9UBS4 358 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 B4GALT6Q9UBX8 382 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 USP18Q9UMW8 372 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 AP4E1Q9UPM8 1137 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 ERVK-11Q9UQG0 969 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 CHKBQ9Y259 395 aa2.68□□□□□ -1.98
PRPF39-206ENST00000554429 A0A1W2PPC4 97 aa2.67□□□□□ -1.98
PRPF39-206ENST00000554429 MTMR11A4FU01 709 aa2.67□□□□□ -1.98
PRPF39-206ENST00000554429 C22orf46C9J442 243 aa2.67□□□□□ -1.98
PRPF39-206ENST00000554429 AGRPO00253 132 aa2.67□□□□□ -1.98
PRPF39-206ENST00000554429 CBX4O00257 560 aa2.67□□□□□ -1.98
PRPF39-206ENST00000554429 FCHO1O14526 889 aa2.67□□□□□ -1.98
PRPF39-206ENST00000554429 NUDT21O43809 227 aaKnown RBP2.67□□□□□ -1.98
PRPF39-206ENST00000554429 DNAJA2O60884 412 aa2.67□□□□□ -1.98
PRPF39-206ENST00000554429 MITFO75030 526 aaPredicted RBP2.67□□□□□ -1.98
PRPF39-206ENST00000554429 CTAG2O75638 210 aa2.67□□□□□ -1.98
PRPF39-206ENST00000554429 TOM1L1O75674 476 aa2.67□□□□□ -1.98
PRPF39-206ENST00000554429 IL18RAPO95256 599 aa2.67□□□□□ -1.98
PRPF39-206ENST00000554429 TGM6O95932 706 aa2.67□□□□□ -1.98
PRPF39-206ENST00000554429 LGI1O95970 557 aa2.67□□□□□ -1.98
PRPF39-206ENST00000554429 GAS8O95995 478 aa2.67□□□□□ -1.98
PRPF39-206ENST00000554429 PENKP01210 267 aaPredicted RBP2.67□□□□□ -1.98
PRPF39-206ENST00000554429 F11P03951 625 aa2.67□□□□□ -1.98
PRPF39-206ENST00000554429 CLTAP09496 248 aa2.67□□□□□ -1.98
PRPF39-206ENST00000554429 OR52Z1P0C646 297 aa2.67□□□□□ -1.98
PRPF39-206ENST00000554429 SPATA31D3P0C874 917 aa2.67□□□□□ -1.98
PRPF39-206ENST00000554429 CPN2P22792 545 aa2.67□□□□□ -1.98
PRPF39-206ENST00000554429 CORO1AP31146 461 aaKnown RBP2.67□□□□□ -1.98
PRPF39-206ENST00000554429 PPP3CCP48454 512 aa2.67□□□□□ -1.98
PRPF39-206ENST00000554429 FNTBP49356 437 aa2.67□□□□□ -1.98
PRPF39-206ENST00000554429 RAB14P61106 215 aa2.67□□□□□ -1.98
PRPF39-206ENST00000554429 GAD2Q05329 585 aa2.67□□□□□ -1.98
PRPF39-206ENST00000554429 TGM3Q08188 693 aa2.67□□□□□ -1.98
PRPF39-206ENST00000554429 DMWDQ09019 674 aa2.67□□□□□ -1.98
PRPF39-206ENST00000554429 SPEM2Q0P670 501 aa2.67□□□□□ -1.98
PRPF39-206ENST00000554429 TBL3Q12788 808 aaKnown RBP2.67□□□□□ -1.98
PRPF39-206ENST00000554429 TWF1Q12792 350 aa2.67□□□□□ -1.98
PRPF39-206ENST00000554429 PAK1Q13153 545 aa2.67□□□□□ -1.98
PRPF39-206ENST00000554429 ADAM9Q13443 819 aa2.67□□□□□ -1.98
PRPF39-206ENST00000554429 MPP2Q14168 576 aa2.67□□□□□ -1.98
PRPF39-206ENST00000554429 TEAD2Q15562 447 aa2.67□□□□□ -1.98
PRPF39-206ENST00000554429 TRIP4Q15650 581 aaPredicted RBP2.67□□□□□ -1.98
PRPF39-206ENST00000554429 KLHL38Q2WGJ6 581 aa2.67□□□□□ -1.98
PRPF39-206ENST00000554429 ITPRIPL2Q3MIP1 535 aa2.67□□□□□ -1.98
PRPF39-206ENST00000554429 TMEM119Q4V9L6 283 aa2.67□□□□□ -1.98
PRPF39-206ENST00000554429 CCDC157Q569K6 752 aa2.67□□□□□ -1.98
PRPF39-206ENST00000554429 ARSJQ5FYB0 599 aaPredicted RBP2.67□□□□□ -1.98
PRPF39-206ENST00000554429 TOR2AQ5JU69 321 aa2.67□□□□□ -1.98
PRPF39-206ENST00000554429 SAPCD1Q5SSQ6 148 aa2.67□□□□□ -1.98
PRPF39-206ENST00000554429 DEPDC1Q5TB30 811 aa2.67□□□□□ -1.98
PRPF39-206ENST00000554429 STPG1Q5TH74 334 aa2.67□□□□□ -1.98
PRPF39-206ENST00000554429 AFMIDQ63HM1 303 aa2.67□□□□□ -1.98
PRPF39-206ENST00000554429 PMS2CLQ68D20 193 aa2.67□□□□□ -1.98
PRPF39-206ENST00000554429 CES3Q6UWW8 571 aa2.67□□□□□ -1.98
PRPF39-206ENST00000554429 SPATA31D4Q6ZUB0 917 aa2.67□□□□□ -1.98
PRPF39-206ENST00000554429 ERN2Q76MJ5 926 aaKnown RBP2.67□□□□□ -1.98
PRPF39-206ENST00000554429 HAUS6Q7Z4H7 955 aa2.67□□□□□ -1.98
PRPF39-206ENST00000554429 USP37Q86T82 979 aa2.67□□□□□ -1.98
PRPF39-206ENST00000554429 DHX40Q8IX18 779 aaKnown RBP2.67□□□□□ -1.98
PRPF39-206ENST00000554429 DSELQ8IZU8 1212 aa2.67□□□□□ -1.98
PRPF39-206ENST00000554429 DAW1Q8N136 415 aa2.67□□□□□ -1.98
PRPF39-206ENST00000554429 TBC1D19Q8N5T2 526 aa2.67□□□□□ -1.98
PRPF39-206ENST00000554429 C1orf127Q8N9H9 656 aa2.67□□□□□ -1.98
PRPF39-206ENST00000554429 NSUN7Q8NE18 718 aaKnown RBP2.67□□□□□ -1.98
PRPF39-206ENST00000554429 BBS1Q8NFJ9 593 aa2.67□□□□□ -1.98
PRPF39-206ENST00000554429 SCAMP5Q8TAC9 235 aa2.67□□□□□ -1.98
PRPF39-206ENST00000554429 SPPL2BQ8TCT7 592 aa2.67□□□□□ -1.98
PRPF39-206ENST00000554429 SEC14L1Q92503 715 aa2.67□□□□□ -1.98
PRPF39-206ENST00000554429 PHF21BQ96EK2 531 aa2.67□□□□□ -1.98
PRPF39-206ENST00000554429 MCRS1Q96EZ8 462 aa2.67□□□□□ -1.98
PRPF39-206ENST00000554429 PGM2Q96G03 612 aa2.67□□□□□ -1.98
PRPF39-206ENST00000554429 METTL2AQ96IZ6 378 aaKnown RBP2.67□□□□□ -1.98
PRPF39-206ENST00000554429 LMF1Q96S06 567 aa2.67□□□□□ -1.98
PRPF39-206ENST00000554429 DMRTA2Q96SC8 542 aa2.67□□□□□ -1.98
PRPF39-206ENST00000554429 OSBPL9Q96SU4 736 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms