RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 RBPMS2Q6ZRY4 209 aaKnown RBP4.91□□□□□ -1.62
CHD8-207ENST00000554384 DSG4Q86SJ6 1040 aa4.91□□□□□ -1.62
CHD8-207ENST00000554384 PTOV1Q86YD1 416 aa4.91□□□□□ -1.62
CHD8-207ENST00000554384 ZDHHC17Q8IUH5 632 aa4.91□□□□□ -1.62
CHD8-207ENST00000554384 PI4KAP1Q8N8J0 262 aa4.91□□□□□ -1.62
CHD8-207ENST00000554384 KBTBD3Q8NAB2 608 aa4.91□□□□□ -1.62
CHD8-207ENST00000554384 PPP4R1Q8TF05 950 aa4.91□□□□□ -1.62
CHD8-207ENST00000554384 DAZLQ92904 295 aaKnown RBP4.91□□□□□ -1.62
CHD8-207ENST00000554384 LYZL4Q96KX0 146 aa4.91□□□□□ -1.62
CHD8-207ENST00000554384 FER1L6-AS2Q96M78 137 aa4.91□□□□□ -1.62
CHD8-207ENST00000554384 NAA11Q9BSU3 229 aaPredicted RBP4.91□□□□□ -1.62
CHD8-207ENST00000554384 POLR3CQ9BUI4 534 aaPredicted RBP4.91□□□□□ -1.62
CHD8-207ENST00000554384 C1QTNF4Q9BXJ3 329 aa4.91□□□□□ -1.62
CHD8-207ENST00000554384 PELI2Q9HAT8 420 aa4.91□□□□□ -1.62
CHD8-207ENST00000554384 MRGBPQ9NV56 204 aa4.91□□□□□ -1.62
CHD8-207ENST00000554384 DLGAP4Q9Y2H0 992 aa4.91□□□□□ -1.62
CHD8-207ENST00000554384 CCL27Q9Y4X3 112 aa4.91□□□□□ -1.62
CHD8-207ENST00000554384 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.91□□□□□ -1.622e-6■■□□□ 12.8
CHD8-207ENST00000554384 PRAC2D3DTV9 90 aa4.9□□□□□ -1.63
CHD8-207ENST00000554384 PROB1E7EW31 1015 aa4.9□□□□□ -1.63
CHD8-207ENST00000554384 TFAP2AP05549 437 aa4.9□□□□□ -1.63
CHD8-207ENST00000554384 CYP11B2P19099 503 aa4.9□□□□□ -1.63
CHD8-207ENST00000554384 EEF1DP29692 281 aaKnown RBP4.9□□□□□ -1.63
CHD8-207ENST00000554384 MMP15P51511 669 aa4.9□□□□□ -1.63
CHD8-207ENST00000554384 CDK3Q00526 305 aa4.9□□□□□ -1.63
CHD8-207ENST00000554384 PNRC1Q12796 327 aaPredicted RBP4.9□□□□□ -1.63
CHD8-207ENST00000554384 GAGE2BQ13066 116 aa4.9□□□□□ -1.63
CHD8-207ENST00000554384 IZUMO4Q1ZYL8 232 aa4.9□□□□□ -1.63
CHD8-207ENST00000554384 GAGE2EQ4V326 116 aa4.9□□□□□ -1.63
CHD8-207ENST00000554384 CCDC184Q52MB2 194 aa4.9□□□□□ -1.63
CHD8-207ENST00000554384 GAGE2AQ6NT46 116 aa4.9□□□□□ -1.63
CHD8-207ENST00000554384 ZNF704Q6ZNC4 412 aaPredicted RBP4.9□□□□□ -1.63
CHD8-207ENST00000554384 DGLUCYQ7Z3D6 616 aa4.9□□□□□ -1.63
CHD8-207ENST00000554384 PIWIL4Q7Z3Z4 852 aaKnown RBP4.9□□□□□ -1.63
CHD8-207ENST00000554384 CENPVQ7Z7K6 275 aaPredicted RBP4.9□□□□□ -1.63
CHD8-207ENST00000554384 CEP57L1Q8IYX8 460 aa4.9□□□□□ -1.63
CHD8-207ENST00000554384 CRYBG2Q8N1P7 616 aa4.9□□□□□ -1.63
CHD8-207ENST00000554384 XXYLT1Q8NBI6 393 aa4.9□□□□□ -1.63
CHD8-207ENST00000554384 TSPAN14Q8NG11 270 aa4.9□□□□□ -1.63
CHD8-207ENST00000554384 SPDL1Q96EA4 605 aa4.9□□□□□ -1.63
CHD8-207ENST00000554384 THOC3Q96J01 351 aaKnown RBP4.9□□□□□ -1.63
CHD8-207ENST00000554384 IL17FQ96PD4 163 aa4.9□□□□□ -1.63
CHD8-207ENST00000554384 NOL11Q9H8H0 719 aaKnown RBP4.9□□□□□ -1.63
CHD8-207ENST00000554384 KLHL1Q9NR64 748 aa4.9□□□□□ -1.63
CHD8-207ENST00000554384 GAGE2DQ9UEU5 116 aa4.9□□□□□ -1.63
CHD8-207ENST00000554384 OSGIN1Q9UJX0 560 aa4.9□□□□□ -1.63
CHD8-207ENST00000554384 RNF150Q9ULK6 438 aa4.9□□□□□ -1.63
CHD8-207ENST00000554384 PLSCR5A0PG75 271 aa4.89□□□□□ -1.63
CHD8-207ENST00000554384 TRIM77I1YAP6 450 aa4.89□□□□□ -1.63
CHD8-207ENST00000554384 MEIS2O14770 477 aa4.89□□□□□ -1.63
CHD8-207ENST00000554384 IPO8O15397 1037 aaKnown RBP4.89□□□□□ -1.63
CHD8-207ENST00000554384 OR10H2O60403 315 aa4.89□□□□□ -1.63
CHD8-207ENST00000554384 OR52Z1P0C646 297 aa4.89□□□□□ -1.63
CHD8-207ENST00000554384 T-ENOLP0DO92 83 aa4.89□□□□□ -1.63
CHD8-207ENST00000554384 USP8P40818 1118 aa4.89□□□□□ -1.63
CHD8-207ENST00000554384 CCR10P46092 362 aa4.89□□□□□ -1.63
CHD8-207ENST00000554384 ZNF41P51814 821 aaPredicted RBP4.89□□□□□ -1.63
CHD8-207ENST00000554384 ZNF132P52740 706 aa4.89□□□□□ -1.63
CHD8-207ENST00000554384 ART1P52961 327 aa4.89□□□□□ -1.63
CHD8-207ENST00000554384 KRTAP10-9P60411 292 aa4.89□□□□□ -1.63
CHD8-207ENST00000554384 COASYQ13057 564 aa4.89□□□□□ -1.63
CHD8-207ENST00000554384 KEAP1Q14145 624 aa4.89□□□□□ -1.63
CHD8-207ENST00000554384 VWC2Q2TAL6 325 aa4.89□□□□□ -1.63
CHD8-207ENST00000554384 TCP11X2Q5H9J9 407 aa4.89□□□□□ -1.63
CHD8-207ENST00000554384 ZNF324BQ6AW86 544 aaPredicted RBP4.89□□□□□ -1.63
CHD8-207ENST00000554384 KRT80Q6KB66 452 aa4.89□□□□□ -1.63
CHD8-207ENST00000554384 SUSD1Q6UWL2 747 aa4.89□□□□□ -1.63
CHD8-207ENST00000554384 ZNF517Q6ZMY9 492 aaPredicted RBP4.89□□□□□ -1.63
CHD8-207ENST00000554384 VSIG1Q86XK7 387 aa4.89□□□□□ -1.63
CHD8-207ENST00000554384 LNX1Q8TBB1 728 aaPredicted RBP4.89□□□□□ -1.63
CHD8-207ENST00000554384 MS4A10Q96PG2 267 aa4.89□□□□□ -1.63
CHD8-207ENST00000554384 DDX31Q9H8H2 851 aaKnown RBP4.89□□□□□ -1.63
CHD8-207ENST00000554384 ANKZF1Q9H8Y5 726 aa4.89□□□□□ -1.63
CHD8-207ENST00000554384 TUBE1Q9UJT0 475 aa4.89□□□□□ -1.63
CHD8-207ENST00000554384 POU2F3Q9UKI9 436 aa4.89□□□□□ -1.63
CHD8-207ENST00000554384 PCDHGB1Q9Y5G3 927 aa4.89□□□□□ -1.63
CHD8-207ENST00000554384 SPIN1Q9Y657 262 aaPredicted RBP4.89□□□□□ -1.63
CHD8-207ENST00000554384 NPATQ14207 1427 aa4.89□□□□□ -1.63
CHD8-207ENST00000554384 VWDEQ8N2E2 1590 aa4.88□□□□□ -1.63
CHD8-207ENST00000554384 CTAGE9A4FU28 777 aa4.88□□□□□ -1.63
CHD8-207ENST00000554384 KRTAP29-1A8MX34 341 aaPredicted RBP4.88□□□□□ -1.63
CHD8-207ENST00000554384 MED24O75448 989 aa4.88□□□□□ -1.63
CHD8-207ENST00000554384 LINGO3P0C6S8 592 aa4.88□□□□□ -1.63
CHD8-207ENST00000554384 CTAGE8P0CG41 777 aa4.88□□□□□ -1.63
CHD8-207ENST00000554384 DAOP14920 347 aa4.88□□□□□ -1.63
CHD8-207ENST00000554384 MPZP25189 248 aa4.88□□□□□ -1.63
CHD8-207ENST00000554384 RPL24P83731 157 aaKnown RBP4.88□□□□□ -1.63
CHD8-207ENST00000554384 FAM133BQ5BKY9 247 aaKnown RBP4.88□□□□□ -1.63
CHD8-207ENST00000554384 NDUFAF5Q5TEU4 345 aa4.88□□□□□ -1.63
CHD8-207ENST00000554384 KLC3Q6P597 504 aa4.88□□□□□ -1.63
CHD8-207ENST00000554384 SHQ1Q6PI26 577 aaKnown RBP4.88□□□□□ -1.63
CHD8-207ENST00000554384 UNQ6126/PRO20091Q6UXV3 157 aa4.88□□□□□ -1.63
CHD8-207ENST00000554384 TUBA1AQ71U36 451 aa4.88□□□□□ -1.63
CHD8-207ENST00000554384 DNAJB7Q7Z6W7 309 aaPredicted RBP4.88□□□□□ -1.63
CHD8-207ENST00000554384 SLFN11Q7Z7L1 901 aa4.88□□□□□ -1.63
CHD8-207ENST00000554384 CTAGE4Q8IX94 777 aa4.88□□□□□ -1.63
CHD8-207ENST00000554384 IGSF21Q96ID5 467 aa4.88□□□□□ -1.63
CHD8-207ENST00000554384 ZNF558Q96NG5 402 aa4.88□□□□□ -1.63
CHD8-207ENST00000554384 TUBA1CQ9BQE3 449 aa4.88□□□□□ -1.63
CHD8-207ENST00000554384 NEURL2Q9BR09 285 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms