RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 C11orf91Q3C1V1 193 aa12.68□□□□□ -0.38
SHMT2-205ENST00000553474 CACHD1Q5VU97 1274 aa12.68□□□□□ -0.38
SHMT2-205ENST00000553474 TPGS1Q6ZTW0 290 aa12.68□□□□□ -0.38
SHMT2-205ENST00000553474 EPHX4Q8IUS5 362 aa12.68□□□□□ -0.38
SHMT2-205ENST00000553474 NXPE1Q8N323 547 aa12.68□□□□□ -0.38
SHMT2-205ENST00000553474 OR2AP1Q8NGE2 309 aa12.68□□□□□ -0.38
SHMT2-205ENST00000553474 MRPS31Q92665 395 aaKnown RBP12.68□□□□□ -0.38
SHMT2-205ENST00000553474 ULK4Q96C45 1275 aa12.68□□□□□ -0.38
SHMT2-205ENST00000553474 RHBDF1Q96CC6 855 aa12.68□□□□□ -0.38
SHMT2-205ENST00000553474 ZNF689Q96CS4 500 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-205ENST00000553474 CGREF1Q99674 301 aa12.68□□□□□ -0.38
SHMT2-205ENST00000553474 NSUN3Q9H649 340 aaKnown RBP12.68□□□□□ -0.38
SHMT2-205ENST00000553474 GORASP2Q9H8Y8 452 aa12.68□□□□□ -0.38
SHMT2-205ENST00000553474 IL21Q9HBE4 155 aa12.68□□□□□ -0.38
SHMT2-205ENST00000553474 TIMMDC1Q9NPL8 285 aa12.68□□□□□ -0.38
SHMT2-205ENST00000553474 SMPD3Q9NY59 655 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-205ENST00000553474 CCL27Q9Y4X3 112 aa12.68□□□□□ -0.38
SHMT2-205ENST00000553474 INSL6Q9Y581 213 aa12.68□□□□□ -0.38
SHMT2-205ENST00000553474 AK5Q9Y6K8 562 aa12.68□□□□□ -0.38
SHMT2-205ENST00000553474 IQCF5A8MTL0 148 aa12.67□□□□□ -0.38
SHMT2-205ENST00000553474 H0YAE9 185 aa12.67□□□□□ -0.38
SHMT2-205ENST00000553474 DLGAP1O14490 977 aa12.67□□□□□ -0.38
SHMT2-205ENST00000553474 ACOX3O15254 700 aa12.67□□□□□ -0.38
SHMT2-205ENST00000553474 ULK1O75385 1050 aa12.67□□□□□ -0.38
SHMT2-205ENST00000553474 DEAF1O75398 565 aaPredicted RBP12.67□□□□□ -0.38
SHMT2-205ENST00000553474 OR6B1O95007 311 aa12.67□□□□□ -0.38
SHMT2-205ENST00000553474 PRAMEF12O95522 483 aa12.67□□□□□ -0.38
SHMT2-205ENST00000553474 G6PDP11413 515 aa12.67□□□□□ -0.38
SHMT2-205ENST00000553474 EPB42P16452 691 aa12.67□□□□□ -0.38
SHMT2-205ENST00000553474 CTPS1P17812 591 aa12.67□□□□□ -0.38
SHMT2-205ENST00000553474 OXTRP30559 389 aa12.67□□□□□ -0.38
SHMT2-205ENST00000553474 HNF1BP35680 557 aa12.67□□□□□ -0.38
SHMT2-205ENST00000553474 GGT5P36269 586 aa12.67□□□□□ -0.38
SHMT2-205ENST00000553474 GNPDA1P46926 289 aa12.67□□□□□ -0.38
SHMT2-205ENST00000553474 ESRRGP62508 458 aa12.67□□□□□ -0.38
SHMT2-205ENST00000553474 HTRA4P83105 476 aaPredicted RBP12.67□□□□□ -0.38
SHMT2-205ENST00000553474 PLOD1Q02809 727 aaPredicted RBP12.67□□□□□ -0.38
SHMT2-205ENST00000553474 AP1ARQ63HQ0 302 aa12.67□□□□□ -0.38
SHMT2-205ENST00000553474 TPRG1Q6ZUI0 275 aa12.67□□□□□ -0.38
SHMT2-205ENST00000553474 FIBCD1Q8N539 461 aa12.67□□□□□ -0.38
SHMT2-205ENST00000553474 ARL14EPQ8N8R7 260 aaPredicted RBP12.67□□□□□ -0.38
SHMT2-205ENST00000553474 FAM47BQ8NA70 645 aa12.67□□□□□ -0.38
SHMT2-205ENST00000553474 PNPT1Q8TCS8 783 aaKnown RBP12.67□□□□□ -0.38
SHMT2-205ENST00000553474 BPIFB1Q8TDL5 484 aa12.67□□□□□ -0.38
SHMT2-205ENST00000553474 ESAMQ96AP7 390 aa12.67□□□□□ -0.38
SHMT2-205ENST00000553474 RDH12Q96NR8 316 aa12.67□□□□□ -0.38
SHMT2-205ENST00000553474 CDK15Q96Q40 435 aa12.67□□□□□ -0.38
SHMT2-205ENST00000553474 RAD9AQ99638 391 aa12.67□□□□□ -0.38
SHMT2-205ENST00000553474 EGFL8Q99944 293 aa12.67□□□□□ -0.38
SHMT2-205ENST00000553474 TM6SF2Q9BZW4 377 aa12.67□□□□□ -0.38
SHMT2-205ENST00000553474 ACTL8Q9H568 366 aa12.67□□□□□ -0.38
SHMT2-205ENST00000553474 CAAP1Q9H8G2 361 aa12.67□□□□□ -0.38
SHMT2-205ENST00000553474 INTS7Q9NVH2 962 aaKnown RBP12.67□□□□□ -0.38
SHMT2-205ENST00000553474 SMOXQ9NWM0 555 aa12.67□□□□□ -0.38
SHMT2-205ENST00000553474 WWOXQ9NZC7 414 aa12.67□□□□□ -0.38
SHMT2-205ENST00000553474 SPG21Q9NZD8 308 aa12.67□□□□□ -0.38
SHMT2-205ENST00000553474 EVLQ9UI08 416 aaPredicted RBP12.67□□□□□ -0.38
SHMT2-205ENST00000553474 OAZ3Q9UMX2 235 aa12.67□□□□□ -0.38
SHMT2-205ENST00000553474 EME2A4GXA9 379 aaPredicted RBP12.66□□□□□ -0.38
SHMT2-205ENST00000553474 C9JVG2 144 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 TAPBPO15533 448 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 PRSS23O95084 383 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 ANXA5P08758 320 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 RAP2AP10114 183 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 ACPPP15309 386 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 BPIP17213 487 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 CDH2P19022 906 aaPredicted RBP12.66□□□□□ -0.38
SHMT2-205ENST00000553474 PPM1AP35813 382 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 PBX2P40425 430 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 HSPA7P48741 367 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 ABRAXAS2Q15018 415 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 KIAA0040Q15053 153 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 PLEKHG6Q3KR16 790 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 FUT11Q495W5 492 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 GGTA1PQ4G0N0 100 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 FAM98BQ52LJ0 330 aaKnown RBP12.66□□□□□ -0.38
SHMT2-205ENST00000553474 GLYATQ6IB77 296 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 USP45Q70EL2 814 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 PATL1Q86TB9 770 aaKnown RBP12.66□□□□□ -0.38
SHMT2-205ENST00000553474 IFNEQ86WN2 208 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 PAF1Q8N7H5 531 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 ZNF557Q8N988 423 aaPredicted RBP12.66□□□□□ -0.38
SHMT2-205ENST00000553474 SLC13A3Q8WWT9 602 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 ECHDC3Q96DC8 303 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 SCRN2Q96FV2 425 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 UGT2B28Q9BY64 529 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 CPEB1Q9BZB8 566 aaKnown RBP12.66□□□□□ -0.38
SHMT2-205ENST00000553474 RPF2Q9H7B2 306 aaKnown RBP12.66□□□□□ -0.38
SHMT2-205ENST00000553474 ZDHHC3Q9NYG2 299 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 GMPR2Q9P2T1 348 aaKnown RBP12.66□□□□□ -0.38
SHMT2-205ENST00000553474 LAMA3Q16787 3333 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 IGLV3-16A0A075B6K0 115 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 CCDC160A6NGH7 325 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 SAC3D1A6NKF1 404 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 NPIPB8E9PQR5 432 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 CLDN7O95471 211 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 KRT6AP02538 564 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 KRT6BP04259 564 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 CA3P07451 260 aa12.66□□□□□ -0.38
SHMT2-205ENST00000553474 ANXA6P08133 673 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms