RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 TPD52P55327 224 aaPredicted RBP4.9□□□□□ -1.63
SYNE2-210ENST00000553455 ZXDBP98169 803 aa4.9□□□□□ -1.63
SYNE2-210ENST00000553455 KEAP1Q14145 624 aa4.9□□□□□ -1.63
SYNE2-210ENST00000553455 SLC39A14Q15043 492 aa4.9□□□□□ -1.63
SYNE2-210ENST00000553455 NDUFAF5Q5TEU4 345 aa4.9□□□□□ -1.63
SYNE2-210ENST00000553455 LRCH2Q5VUJ6 765 aa4.9□□□□□ -1.63
SYNE2-210ENST00000553455 PRR27Q6MZM9 219 aa4.9□□□□□ -1.63
SYNE2-210ENST00000553455 CAVIN1Q6NZI2 390 aaKnown RBP4.9□□□□□ -1.63
SYNE2-210ENST00000553455 PRSS57Q6UWY2 283 aa4.9□□□□□ -1.63
SYNE2-210ENST00000553455 LINGO4Q6UY18 593 aa4.9□□□□□ -1.63
SYNE2-210ENST00000553455 ZBTB49Q6ZSB9 765 aa4.9□□□□□ -1.63
SYNE2-210ENST00000553455 PIWIL4Q7Z3Z4 852 aaKnown RBP4.9□□□□□ -1.63
SYNE2-210ENST00000553455 METTL23Q86XA0 190 aa4.9□□□□□ -1.63
SYNE2-210ENST00000553455 FAM9BQ8IZU0 186 aa4.9□□□□□ -1.63
SYNE2-210ENST00000553455 CCAR2Q8N163 923 aaKnown RBP4.9□□□□□ -1.63
SYNE2-210ENST00000553455 MUC20Q8N307 709 aaPredicted RBP4.9□□□□□ -1.63
SYNE2-210ENST00000553455 CPSF7Q8N684 471 aaKnown RBP4.9□□□□□ -1.63
SYNE2-210ENST00000553455 KCNH5Q8NCM2 988 aa4.9□□□□□ -1.63
SYNE2-210ENST00000553455 ROBO4Q8WZ75 1007 aa4.9□□□□□ -1.63
SYNE2-210ENST00000553455 SPSB1Q96BD6 273 aa4.9□□□□□ -1.63
SYNE2-210ENST00000553455 SEPHS2Q99611 448 aa4.9□□□□□ -1.63
SYNE2-210ENST00000553455 FZD8Q9H461 694 aa4.9□□□□□ -1.63
SYNE2-210ENST00000553455 ACKR4Q9NPB9 350 aa4.9□□□□□ -1.63
SYNE2-210ENST00000553455 RNF150Q9ULK6 438 aa4.9□□□□□ -1.63
SYNE2-210ENST00000553455 ABT1Q9ULW3 272 aaKnown RBP4.9□□□□□ -1.63
SYNE2-210ENST00000553455 PADI2Q9Y2J8 665 aa4.9□□□□□ -1.63
SYNE2-210ENST00000553455 FLT1P17948 1338 aa4.9□□□□□ -1.63
SYNE2-210ENST00000553455 HYKKA2RU49 373 aa4.89□□□□□ -1.63
SYNE2-210ENST00000553455 ASPDHA6ND91 283 aa4.89□□□□□ -1.63
SYNE2-210ENST00000553455 CLIC2O15247 247 aa4.89□□□□□ -1.63
SYNE2-210ENST00000553455 PDE9AO76083 593 aa4.89□□□□□ -1.63
SYNE2-210ENST00000553455 WDPCPO95876 746 aa4.89□□□□□ -1.63
SYNE2-210ENST00000553455 TLX1P31314 330 aaPredicted RBP4.89□□□□□ -1.63
SYNE2-210ENST00000553455 HSPA4P34932 840 aa4.89□□□□□ -1.63
SYNE2-210ENST00000553455 SLC9A3P48764 834 aa4.89□□□□□ -1.63
SYNE2-210ENST00000553455 ART1P52961 327 aa4.89□□□□□ -1.63
SYNE2-210ENST00000553455 TERF1P54274 439 aa4.89□□□□□ -1.63
SYNE2-210ENST00000553455 MLLT10P55197 1068 aa4.89□□□□□ -1.63
SYNE2-210ENST00000553455 KRT83P78385 493 aa4.89□□□□□ -1.63
SYNE2-210ENST00000553455 PRKCZQ05513 592 aa4.89□□□□□ -1.63
SYNE2-210ENST00000553455 MZT1Q08AG7 82 aa4.89□□□□□ -1.63
SYNE2-210ENST00000553455 BFSP1Q12934 665 aa4.89□□□□□ -1.63
SYNE2-210ENST00000553455 NADSYN1Q6IA69 706 aa4.89□□□□□ -1.63
SYNE2-210ENST00000553455 UNQ6126/PRO20091Q6UXV3 157 aa4.89□□□□□ -1.63
SYNE2-210ENST00000553455 PACS1Q6VY07 963 aa4.89□□□□□ -1.63
SYNE2-210ENST00000553455 TUBA1AQ71U36 451 aa4.89□□□□□ -1.63
SYNE2-210ENST00000553455 TMPRSS11BQ86T26 416 aa4.89□□□□□ -1.63
SYNE2-210ENST00000553455 LONP2Q86WA8 852 aa4.89□□□□□ -1.63
SYNE2-210ENST00000553455 MFN1Q8IWA4 741 aa4.89□□□□□ -1.63
SYNE2-210ENST00000553455 SAMD14Q8IZD0 417 aaPredicted RBP4.89□□□□□ -1.63
SYNE2-210ENST00000553455 OR8H3Q8N146 312 aa4.89□□□□□ -1.63
SYNE2-210ENST00000553455 CRYBG2Q8N1P7 616 aa4.89□□□□□ -1.63
SYNE2-210ENST00000553455 TTC30BQ8N4P2 665 aa4.89□□□□□ -1.63
SYNE2-210ENST00000553455 IQUBQ8NA54 791 aa4.89□□□□□ -1.63
SYNE2-210ENST00000553455 GOT1L1Q8NHS2 421 aaPredicted RBP4.89□□□□□ -1.63
SYNE2-210ENST00000553455 ABHD8Q96I13 439 aa4.89□□□□□ -1.63
SYNE2-210ENST00000553455 SFXN2Q96NB2 322 aa4.89□□□□□ -1.63
SYNE2-210ENST00000553455 IL17FQ96PD4 163 aa4.89□□□□□ -1.63
SYNE2-210ENST00000553455 GBP5Q96PP8 586 aa4.89□□□□□ -1.63
SYNE2-210ENST00000553455 TUBA1CQ9BQE3 449 aa4.89□□□□□ -1.63
SYNE2-210ENST00000553455 MGME1Q9BQP7 344 aa4.89□□□□□ -1.63
SYNE2-210ENST00000553455 ALDH8A1Q9H2A2 487 aaPredicted RBP4.89□□□□□ -1.63
SYNE2-210ENST00000553455 ZWILCHQ9H900 591 aa4.89□□□□□ -1.63
SYNE2-210ENST00000553455 PFDN4Q9NQP4 134 aa4.89□□□□□ -1.63
SYNE2-210ENST00000553455 PRAC2D3DTV9 90 aa4.88□□□□□ -1.63
SYNE2-210ENST00000553455 SLC28A2O43868 658 aa4.88□□□□□ -1.63
SYNE2-210ENST00000553455 H1F0P07305 194 aaKnown RBP4.88□□□□□ -1.63
SYNE2-210ENST00000553455 CD22P20273 847 aa4.88□□□□□ -1.63
SYNE2-210ENST00000553455 AZGP1P25311 298 aaKnown RBP4.88□□□□□ -1.63
SYNE2-210ENST00000553455 TKTP29401 623 aaKnown RBP4.88□□□□□ -1.63
SYNE2-210ENST00000553455 THOP1P52888 689 aa4.88□□□□□ -1.63
SYNE2-210ENST00000553455 POLR2LP62875 67 aaKnown RBP4.88□□□□□ -1.63
SYNE2-210ENST00000553455 ILF3Q12906 894 aaKnown RBP eCLIP4.88□□□□□ -1.63
SYNE2-210ENST00000553455 MFAP5Q13361 173 aa4.88□□□□□ -1.63
SYNE2-210ENST00000553455 MPP7Q5T2T1 576 aa4.88□□□□□ -1.63
SYNE2-210ENST00000553455 ZNF517Q6ZMY9 492 aaPredicted RBP4.88□□□□□ -1.63
SYNE2-210ENST00000553455 DET1Q7L5Y6 550 aa4.88□□□□□ -1.63
SYNE2-210ENST00000553455 DSG4Q86SJ6 1040 aa4.88□□□□□ -1.63
SYNE2-210ENST00000553455 RDM1Q8NG50 284 aa4.88□□□□□ -1.63
SYNE2-210ENST00000553455 RNF128Q8TEB7 428 aa4.88□□□□□ -1.63
SYNE2-210ENST00000553455 DEPDC1BQ8WUY9 529 aa4.88□□□□□ -1.63
SYNE2-210ENST00000553455 NUDCD2Q8WVJ2 157 aa4.88□□□□□ -1.63
SYNE2-210ENST00000553455 EXT2Q93063 718 aa4.88□□□□□ -1.63
SYNE2-210ENST00000553455 OTUB1Q96FW1 271 aaPredicted RBP4.88□□□□□ -1.63
SYNE2-210ENST00000553455 C17orf77Q96MU5 243 aa4.88□□□□□ -1.63
SYNE2-210ENST00000553455 SPAG5Q96R06 1193 aa4.88□□□□□ -1.63
SYNE2-210ENST00000553455 FEVQ99581 238 aa4.88□□□□□ -1.63
SYNE2-210ENST00000553455 CPNE1Q99829 537 aa4.88□□□□□ -1.63
SYNE2-210ENST00000553455 WACQ9BTA9 647 aa4.88□□□□□ -1.63
SYNE2-210ENST00000553455 POLR3CQ9BUI4 534 aaPredicted RBP4.88□□□□□ -1.63
SYNE2-210ENST00000553455 C1QTNF4Q9BXJ3 329 aa4.88□□□□□ -1.63
SYNE2-210ENST00000553455 VN1R1Q9GZP7 353 aa4.88□□□□□ -1.63
SYNE2-210ENST00000553455 ARRDC1-AS1Q9H2J1 176 aa4.88□□□□□ -1.63
SYNE2-210ENST00000553455 HIPK2Q9H2X6 1198 aa4.88□□□□□ -1.63
SYNE2-210ENST00000553455 A0A087WV48 116 aa4.87□□□□□ -1.63
SYNE2-210ENST00000553455 TRAV34A0A0B4J273 112 aa4.87□□□□□ -1.63
SYNE2-210ENST00000553455 MED19A0JLT2 244 aaPredicted RBP4.87□□□□□ -1.63
SYNE2-210ENST00000553455 PLSCR5A0PG75 271 aa4.87□□□□□ -1.63
SYNE2-210ENST00000553455 ANXA2P2A6NMY6 339 aa4.87□□□□□ -1.63
SYNE2-210ENST00000553455 BAG4O95429 457 aaKnown RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms