RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 PLOD1Q02809 727 aaPredicted RBP13.76□□□□□ -0.21
PTCH1-226ENST00000553011 FRG1Q14331 258 aaKnown RBP13.76□□□□□ -0.21
PTCH1-226ENST00000553011 KRT33BQ14525 404 aa13.76□□□□□ -0.21
PTCH1-226ENST00000553011 PLCL1Q15111 1095 aa13.76□□□□□ -0.21
PTCH1-226ENST00000553011 TMED2Q15363 201 aa13.76□□□□□ -0.21
PTCH1-226ENST00000553011 CLPPQ16740 277 aaPredicted RBP13.76□□□□□ -0.21
PTCH1-226ENST00000553011 TEDDM1Q5T9Z0 273 aa13.76□□□□□ -0.21
PTCH1-226ENST00000553011 OTOAQ7RTW8 1153 aa13.76□□□□□ -0.21
PTCH1-226ENST00000553011 CNTN4Q8IWV2 1026 aa13.76□□□□□ -0.21
PTCH1-226ENST00000553011 SLC22A15Q8IZD6 547 aa13.76□□□□□ -0.21
PTCH1-226ENST00000553011 ASZ1Q8WWH4 475 aa13.76□□□□□ -0.21
PTCH1-226ENST00000553011 C9orf72Q96LT7 481 aa13.76□□□□□ -0.21
PTCH1-226ENST00000553011 CCDC74BQ96LY2 380 aa13.76□□□□□ -0.21
PTCH1-226ENST00000553011 TMEM74Q96NL1 305 aa13.76□□□□□ -0.21
PTCH1-226ENST00000553011 NRTNQ99748 197 aa13.76□□□□□ -0.21
PTCH1-226ENST00000553011 HGH1Q9BTY7 390 aa13.76□□□□□ -0.21
PTCH1-226ENST00000553011 EPB41L1Q9H4G0 881 aa13.76□□□□□ -0.21
PTCH1-226ENST00000553011 KIR3DX1Q9H7L2 352 aa13.76□□□□□ -0.21
PTCH1-226ENST00000553011 ZDHHC18Q9NUE0 388 aa13.76□□□□□ -0.21
PTCH1-226ENST00000553011 SLC24A2Q9UI40 661 aa13.76□□□□□ -0.21
PTCH1-226ENST00000553011 HEBP2Q9Y5Z4 205 aa13.76□□□□□ -0.21
PTCH1-226ENST00000553011 COLEC10Q9Y6Z7 277 aa13.76□□□□□ -0.21
PTCH1-226ENST00000553011 SPTBP11277 2137 aa13.76□□□□□ -0.21
PTCH1-226ENST00000553011 SLCO2B1O94956 709 aa13.75□□□□□ -0.21
PTCH1-226ENST00000553011 MPOP05164 745 aa13.75□□□□□ -0.21
PTCH1-226ENST00000553011 THRAP10827 490 aa13.75□□□□□ -0.21
PTCH1-226ENST00000553011 NDUFS1P28331 727 aa13.75□□□□□ -0.21
PTCH1-226ENST00000553011 SSTR1P30872 391 aa13.75□□□□□ -0.21
PTCH1-226ENST00000553011 CAPZBP47756 277 aa13.75□□□□□ -0.21
PTCH1-226ENST00000553011 LEPRP48357 1165 aaKnown RBP13.75□□□□□ -0.21
PTCH1-226ENST00000553011 GFERP55789 205 aa13.75□□□□□ -0.21
PTCH1-226ENST00000553011 MGAT5Q09328 741 aa13.75□□□□□ -0.21
PTCH1-226ENST00000553011 PRKG2Q13237 762 aa13.75□□□□□ -0.21
PTCH1-226ENST00000553011 C16orf72Q14CZ0 275 aa13.75□□□□□ -0.21
PTCH1-226ENST00000553011 GLE1Q53GS7 698 aaKnown RBP13.75□□□□□ -0.21
PTCH1-226ENST00000553011 C3orf38Q5JPI3 329 aa13.75□□□□□ -0.21
PTCH1-226ENST00000553011 SNAP47Q5SQN1 464 aa13.75□□□□□ -0.21
PTCH1-226ENST00000553011 TMEM71Q6P5X7 295 aa13.75□□□□□ -0.21
PTCH1-226ENST00000553011 WDR74Q6RFH5 385 aaPredicted RBP13.75□□□□□ -0.21
PTCH1-226ENST00000553011 UNQ6494/PRO21346Q6UXR6 183 aa13.75□□□□□ -0.21
PTCH1-226ENST00000553011 RCBTB1Q8NDN9 531 aa13.75□□□□□ -0.21
PTCH1-226ENST00000553011 OR4D9Q8NGE8 314 aa13.75□□□□□ -0.21
PTCH1-226ENST00000553011 OR5AR1Q8NGP9 310 aa13.75□□□□□ -0.21
PTCH1-226ENST00000553011 GABPB2Q8TAK5 448 aaPredicted RBP13.75□□□□□ -0.21
PTCH1-226ENST00000553011 GSDMBQ8TAX9 411 aa13.75□□□□□ -0.21
PTCH1-226ENST00000553011 ZFPM2Q8WW38 1151 aa13.75□□□□□ -0.21
PTCH1-226ENST00000553011 GRAMD1AQ96CP6 724 aa13.75□□□□□ -0.21
PTCH1-226ENST00000553011 LIN37Q96GY3 246 aaPredicted RBP13.75□□□□□ -0.21
PTCH1-226ENST00000553011 NDNQ99608 321 aa13.75□□□□□ -0.21
PTCH1-226ENST00000553011 SLC30A3Q99726 388 aa13.75□□□□□ -0.21
PTCH1-226ENST00000553011 DPYSL5Q9BPU6 564 aa13.75□□□□□ -0.21
PTCH1-226ENST00000553011 NRSN2Q9GZP1 204 aa13.75□□□□□ -0.21
PTCH1-226ENST00000553011 CCDC68Q9H2F9 335 aa13.75□□□□□ -0.21
PTCH1-226ENST00000553011 MVB12BQ9H7P6 319 aa13.75□□□□□ -0.21
PTCH1-226ENST00000553011 FAM114A2Q9NRY5 505 aa13.75□□□□□ -0.21
PTCH1-226ENST00000553011 MOCS1Q9NZB8 636 aa13.75□□□□□ -0.21
PTCH1-226ENST00000553011 KLHL3Q9UH77 587 aa13.75□□□□□ -0.21
PTCH1-226ENST00000553011 TSR3Q9UJK0 312 aaKnown RBP13.75□□□□□ -0.21
PTCH1-226ENST00000553011 SATB2Q9UPW6 733 aa13.75□□□□□ -0.21
PTCH1-226ENST00000553011 ASF1AQ9Y294 204 aa13.75□□□□□ -0.21
PTCH1-226ENST00000553011 MED16Q9Y2X0 877 aa13.75□□□□□ -0.21
PTCH1-226ENST00000553011 ADAMTS20P59510 1910 aa13.74□□□□□ -0.21
PTCH1-226ENST00000553011 CCDC187A0A096LP49 1063 aa13.74□□□□□ -0.21
PTCH1-226ENST00000553011 E5RI56 91 aa13.74□□□□□ -0.21
PTCH1-226ENST00000553011 TMX2-CTNND1H3BSU7 103 aa13.74□□□□□ -0.21
PTCH1-226ENST00000553011 KPNA5O15131 536 aa13.74□□□□□ -0.21
PTCH1-226ENST00000553011 PIAS1O75925 651 aa13.74□□□□□ -0.21
PTCH1-226ENST00000553011 AHSGP02765 367 aa13.74□□□□□ -0.21
PTCH1-226ENST00000553011 HGFP14210 728 aa13.74□□□□□ -0.21
PTCH1-226ENST00000553011 MAGEA4P43358 317 aa13.74□□□□□ -0.21
PTCH1-226ENST00000553011 CLCN7P51798 805 aa13.74□□□□□ -0.21
PTCH1-226ENST00000553011 PPP1CAP62136 330 aa13.74□□□□□ -0.21
PTCH1-226ENST00000553011 GABREP78334 506 aa13.74□□□□□ -0.21
PTCH1-226ENST00000553011 CYP4F3Q08477 520 aa13.74□□□□□ -0.21
PTCH1-226ENST00000553011 ABRQ12979 859 aa13.74□□□□□ -0.21
PTCH1-226ENST00000553011 PLEKHS1Q5SXH7 462 aa13.74□□□□□ -0.21
PTCH1-226ENST00000553011 RBM20Q5T481 1227 aaKnown RBP13.74□□□□□ -0.21
PTCH1-226ENST00000553011 FOXR1Q6PIV2 292 aa13.74□□□□□ -0.21
PTCH1-226ENST00000553011 KIAA0408Q6ZU52 694 aa13.74□□□□□ -0.21
PTCH1-226ENST00000553011 PALM2Q8IXS6 379 aa13.74□□□□□ -0.21
PTCH1-226ENST00000553011 ZBTB2Q8N680 514 aa13.74□□□□□ -0.21
PTCH1-226ENST00000553011 SIDT2Q8NBJ9 832 aaKnown RBP13.74□□□□□ -0.21
PTCH1-226ENST00000553011 ACVR1CQ8NER5 493 aa13.74□□□□□ -0.21
PTCH1-226ENST00000553011 CFAP61Q8NHU2 1237 aa13.74□□□□□ -0.21
PTCH1-226ENST00000553011 GIMAP7Q8NHV1 300 aa13.74□□□□□ -0.21
PTCH1-226ENST00000553011 WDR36Q8NI36 951 aaKnown RBP13.74□□□□□ -0.21
PTCH1-226ENST00000553011 MDM1Q8TC05 714 aa13.74□□□□□ -0.21
PTCH1-226ENST00000553011 IFT81Q8WYA0 676 aa13.74□□□□□ -0.21
PTCH1-226ENST00000553011 NXPE2Q96DL1 559 aa13.74□□□□□ -0.21
PTCH1-226ENST00000553011 AARSD1Q9BTE6 412 aaKnown RBP13.74□□□□□ -0.21
PTCH1-226ENST00000553011 PHACTR1Q9C0D0 580 aa13.74□□□□□ -0.21
PTCH1-226ENST00000553011 STRADBQ9C0K7 418 aa13.74□□□□□ -0.21
PTCH1-226ENST00000553011 L2HGDHQ9H9P8 463 aa13.74□□□□□ -0.21
PTCH1-226ENST00000553011 PDP2Q9P2J9 529 aa13.74□□□□□ -0.21
PTCH1-226ENST00000553011 RUVBL2Q9Y230 463 aaKnown RBP13.74□□□□□ -0.21
PTCH1-226ENST00000553011 PSAT1Q9Y617 370 aa13.74□□□□□ -0.21
PTCH1-226ENST00000553011 AK5Q9Y6K8 562 aa13.74□□□□□ -0.21
PTCH1-226ENST00000553011 MN1Q10571 1320 aaPredicted RBP13.73□□□□□ -0.21
PTCH1-226ENST00000553011 OR6C74A6NCV1 312 aa13.73□□□□□ -0.21
PTCH1-226ENST00000553011 A8MU76 341 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms