RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 C14orf79Q96F83 325 aa11.03□□□□□ -0.64
SUPT16H-202ENST00000552829 CSPG4P5Q96PW8 444 aa11.03□□□□□ -0.64
SUPT16H-202ENST00000552829 C1GALT1Q9NS00 363 aa11.03□□□□□ -0.64
SUPT16H-202ENST00000552829 AMACRQ9UHK6 382 aa11.03□□□□□ -0.64
SUPT16H-202ENST00000552829 POMT2Q9UKY4 750 aa11.03□□□□□ -0.64
SUPT16H-202ENST00000552829 PCDHA13Q9Y5I0 950 aa11.03□□□□□ -0.64
SUPT16H-202ENST00000552829 SNRNP200O75643 2136 aaKnown RBP11.02□□□□□ -0.64
SUPT16H-202ENST00000552829 GTF3C1Q12789 2109 aa11.02□□□□□ -0.64
SUPT16H-202ENST00000552829 CCDC78A2IDD5 438 aa11.02□□□□□ -0.65
SUPT16H-202ENST00000552829 OR6C74A6NCV1 312 aa11.02□□□□□ -0.65
SUPT16H-202ENST00000552829 GOLGA6L9A6NEM1 432 aa11.02□□□□□ -0.65
SUPT16H-202ENST00000552829 H3BMH7 237 aa11.02□□□□□ -0.65
SUPT16H-202ENST00000552829 DDX3XO00571 662 aaKnown RBP eCLIP11.02□□□□□ -0.65
SUPT16H-202ENST00000552829 DDX3YO15523 660 aaKnown RBP11.02□□□□□ -0.65
SUPT16H-202ENST00000552829 KCNN4O15554 427 aa11.02□□□□□ -0.65
SUPT16H-202ENST00000552829 RNF8O76064 485 aa11.02□□□□□ -0.65
SUPT16H-202ENST00000552829 UMODP07911 640 aa11.02□□□□□ -0.65
SUPT16H-202ENST00000552829 MMP2P08253 660 aa11.02□□□□□ -0.65
SUPT16H-202ENST00000552829 CCDC172P0C7W6 258 aa11.02□□□□□ -0.65
SUPT16H-202ENST00000552829 CBSLP0DN79 551 aa11.02□□□□□ -0.65
SUPT16H-202ENST00000552829 VCLP18206 1134 aa11.02□□□□□ -0.65
SUPT16H-202ENST00000552829 CYP2A7P20853 494 aa11.02□□□□□ -0.65
SUPT16H-202ENST00000552829 AGXTP21549 392 aa11.02□□□□□ -0.65
SUPT16H-202ENST00000552829 CBSP35520 551 aa11.02□□□□□ -0.65
SUPT16H-202ENST00000552829 ARCN1P48444 511 aaKnown RBP11.02□□□□□ -0.65
SUPT16H-202ENST00000552829 KCNK10P57789 538 aa11.02□□□□□ -0.65
SUPT16H-202ENST00000552829 ITKQ08881 620 aa11.02□□□□□ -0.65
SUPT16H-202ENST00000552829 CDC16Q13042 620 aa11.02□□□□□ -0.65
SUPT16H-202ENST00000552829 AIMP2Q13155 320 aaKnown RBP11.02□□□□□ -0.65
SUPT16H-202ENST00000552829 SLC18A3Q16572 532 aa11.02□□□□□ -0.65
SUPT16H-202ENST00000552829 VWA2Q5GFL6 755 aa11.02□□□□□ -0.65
SUPT16H-202ENST00000552829 CCDC122Q5T0U0 273 aa11.02□□□□□ -0.65
SUPT16H-202ENST00000552829 ALS2CLQ60I27 953 aa11.02□□□□□ -0.65
SUPT16H-202ENST00000552829 SYT10Q6XYQ8 523 aa11.02□□□□□ -0.65
SUPT16H-202ENST00000552829 TMC3Q7Z5M5 1100 aa11.02□□□□□ -0.65
SUPT16H-202ENST00000552829 OOSP2Q86WS3 158 aa11.02□□□□□ -0.65
SUPT16H-202ENST00000552829 MMP21Q8N119 569 aa11.02□□□□□ -0.65
SUPT16H-202ENST00000552829 BCORP1Q8N888 145 aa11.02□□□□□ -0.65
SUPT16H-202ENST00000552829 ACBD4Q8NC06 268 aa11.02□□□□□ -0.65
SUPT16H-202ENST00000552829 VPS35Q96QK1 796 aa11.02□□□□□ -0.65
SUPT16H-202ENST00000552829 AGPAT1Q99943 283 aa11.02□□□□□ -0.65
SUPT16H-202ENST00000552829 PACSIN1Q9BY11 444 aa11.02□□□□□ -0.65
SUPT16H-202ENST00000552829 FANCEQ9HB96 536 aa11.02□□□□□ -0.65
SUPT16H-202ENST00000552829 RAD18Q9NS91 495 aa11.02□□□□□ -0.65
SUPT16H-202ENST00000552829 PARVAQ9NVD7 372 aa11.02□□□□□ -0.65
SUPT16H-202ENST00000552829 SOHLH2Q9NX45 425 aa11.02□□□□□ -0.65
SUPT16H-202ENST00000552829 SLC24A2Q9UI40 661 aa11.02□□□□□ -0.65
SUPT16H-202ENST00000552829 GUCA1BQ9UMX6 200 aa11.02□□□□□ -0.65
SUPT16H-202ENST00000552829 PTRH2Q9Y3E5 179 aaKnown RBP11.02□□□□□ -0.65
SUPT16H-202ENST00000552829 ABCA4P78363 2273 aa11.02□□□□□ -0.65
SUPT16H-202ENST00000552829 C3orf80F5H4A9 247 aa11.01□□□□□ -0.65
SUPT16H-202ENST00000552829 AGPSO00116 658 aa11.01□□□□□ -0.65
SUPT16H-202ENST00000552829 MATN3O15232 486 aa11.01□□□□□ -0.65
SUPT16H-202ENST00000552829 ZNF749O43361 778 aa11.01□□□□□ -0.65
SUPT16H-202ENST00000552829 HBQ1P09105 142 aa11.01□□□□□ -0.65
SUPT16H-202ENST00000552829 MTHFD1P11586 935 aaKnown RBP11.01□□□□□ -0.65
SUPT16H-202ENST00000552829 CD1EP15812 388 aa11.01□□□□□ -0.65
SUPT16H-202ENST00000552829 CA4P22748 312 aa11.01□□□□□ -0.65
SUPT16H-202ENST00000552829 ARL4AP40617 200 aa11.01□□□□□ -0.65
SUPT16H-202ENST00000552829 PREPP48147 710 aa11.01□□□□□ -0.65
SUPT16H-202ENST00000552829 GALNT2Q10471 571 aa11.01□□□□□ -0.65
SUPT16H-202ENST00000552829 TMEM115Q12893 351 aaPredicted RBP11.01□□□□□ -0.65
SUPT16H-202ENST00000552829 GALNT3Q14435 633 aa11.01□□□□□ -0.65
SUPT16H-202ENST00000552829 METRNLQ641Q3 311 aa11.01□□□□□ -0.65
SUPT16H-202ENST00000552829 MRPL14Q6P1L8 145 aaKnown RBP11.01□□□□□ -0.65
SUPT16H-202ENST00000552829 XKRXQ6PP77 449 aa11.01□□□□□ -0.65
SUPT16H-202ENST00000552829 FAM180AQ6UWF9 173 aa11.01□□□□□ -0.65
SUPT16H-202ENST00000552829 RPTNQ6XPR3 784 aa11.01□□□□□ -0.65
SUPT16H-202ENST00000552829 B4GALNT4Q76KP1 1039 aa11.01□□□□□ -0.65
SUPT16H-202ENST00000552829 AMZ2Q86W34 360 aa11.01□□□□□ -0.65
SUPT16H-202ENST00000552829 TRAPPC5Q8IUR0 188 aa11.01□□□□□ -0.65
SUPT16H-202ENST00000552829 TTC30BQ8N4P2 665 aa11.01□□□□□ -0.65
SUPT16H-202ENST00000552829 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.01□□□□□ -0.65
SUPT16H-202ENST00000552829 PTERQ96BW5 349 aa11.01□□□□□ -0.65
SUPT16H-202ENST00000552829 TSGA13Q96PP4 275 aa11.01□□□□□ -0.65
SUPT16H-202ENST00000552829 GBP5Q96PP8 586 aa11.01□□□□□ -0.65
SUPT16H-202ENST00000552829 INSM2Q96T92 566 aaPredicted RBP11.01□□□□□ -0.65
SUPT16H-202ENST00000552829 C17orf62Q9BQA9 187 aa11.01□□□□□ -0.65
SUPT16H-202ENST00000552829 SYT11Q9BT88 431 aa11.01□□□□□ -0.65
SUPT16H-202ENST00000552829 PITPNM3Q9BZ71 974 aa11.01□□□□□ -0.65
SUPT16H-202ENST00000552829 LACRTQ9GZZ8 138 aa11.01□□□□□ -0.65
SUPT16H-202ENST00000552829 KIR3DX1Q9H7L2 352 aa11.01□□□□□ -0.65
SUPT16H-202ENST00000552829 ZFYVE1Q9HBF4 777 aa11.01□□□□□ -0.65
SUPT16H-202ENST00000552829 OLAHQ9NV23 265 aa11.01□□□□□ -0.65
SUPT16H-202ENST00000552829 RBM22Q9NW64 420 aaKnown RBP eCLIP11.01□□□□□ -0.65
SUPT16H-202ENST00000552829 TAS2R14Q9NYV8 317 aa11.01□□□□□ -0.65
SUPT16H-202ENST00000552829 SUCOQ9UBS9 1254 aaKnown RBP11.01□□□□□ -0.65
SUPT16H-202ENST00000552829 SERTAD3Q9UJW9 196 aa11.01□□□□□ -0.65
SUPT16H-202ENST00000552829 PSMD13Q9UNM6 376 aa11.01□□□□□ -0.65
SUPT16H-202ENST00000552829 BZW2Q9Y6E2 419 aaKnown RBP11.01□□□□□ -0.65
SUPT16H-202ENST00000552829 MACROD2A1Z1Q3 448 aa11□□□□□ -0.65
SUPT16H-202ENST00000552829 C19orf84I3L1E1 186 aa11□□□□□ -0.65
SUPT16H-202ENST00000552829 POP7O75817 140 aaKnown RBP11□□□□□ -0.65
SUPT16H-202ENST00000552829 HLA-DQB2P05538 268 aa11□□□□□ -0.65
SUPT16H-202ENST00000552829 CD63P08962 238 aa11□□□□□ -0.65
SUPT16H-202ENST00000552829 TCF4P15884 667 aa11□□□□□ -0.65
SUPT16H-202ENST00000552829 ST6GAL1P15907 406 aa11□□□□□ -0.65
SUPT16H-202ENST00000552829 AGAP20933 346 aa11□□□□□ -0.65
SUPT16H-202ENST00000552829 SERPINB6P35237 376 aa11□□□□□ -0.65
SUPT16H-202ENST00000552829 PCK1P35558 622 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms