RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 SLC30A10Q6XR72 485 aa4.12□□□□□ -1.75
USP44-208ENST00000552440 SEPT14Q6ZU15 432 aa4.12□□□□□ -1.75
USP44-208ENST00000552440 HTR3DQ70Z44 454 aa4.12□□□□□ -1.75
USP44-208ENST00000552440 NANOGNBQ7Z5D8 188 aa4.12□□□□□ -1.75
USP44-208ENST00000552440 BIVMQ86UB2 503 aa4.12□□□□□ -1.75
USP44-208ENST00000552440 C4orf19Q8IY42 314 aa4.12□□□□□ -1.75
USP44-208ENST00000552440 SRRM1Q8IYB3 904 aaKnown RBP4.12□□□□□ -1.75
USP44-208ENST00000552440 OR56B1Q8NGI3 324 aa4.12□□□□□ -1.75
USP44-208ENST00000552440 POC1BQ8TC44 478 aa4.12□□□□□ -1.75
USP44-208ENST00000552440 SLC26A7Q8TE54 656 aa4.12□□□□□ -1.75
USP44-208ENST00000552440 FIG4Q92562 907 aa4.12□□□□□ -1.75
USP44-208ENST00000552440 APBB2Q92870 758 aa4.12□□□□□ -1.75
USP44-208ENST00000552440 AP2M1Q96CW1 435 aa4.12□□□□□ -1.75
USP44-208ENST00000552440 PABPC5Q96DU9 382 aaKnown RBP4.12□□□□□ -1.75
USP44-208ENST00000552440 HAPLN3Q96S86 360 aa4.12□□□□□ -1.75
USP44-208ENST00000552440 ZNF607Q96SK3 696 aa4.12□□□□□ -1.75
USP44-208ENST00000552440 PCDHB18PQ96TA0 734 aa4.12□□□□□ -1.75
USP44-208ENST00000552440 GON7Q9BXV9 100 aa4.12□□□□□ -1.75
USP44-208ENST00000552440 MRPL37Q9BZE1 423 aaKnown RBP4.12□□□□□ -1.75
USP44-208ENST00000552440 SLCO5A1Q9H2Y9 848 aa4.12□□□□□ -1.75
USP44-208ENST00000552440 SMOC2Q9H3U7 446 aa4.12□□□□□ -1.75
USP44-208ENST00000552440 SYNDIG1Q9H7V2 258 aa4.12□□□□□ -1.75
USP44-208ENST00000552440 ETNK2Q9NVF9 386 aa4.12□□□□□ -1.75
USP44-208ENST00000552440 HYPKQ9NX55 129 aa4.12□□□□□ -1.75
USP44-208ENST00000552440 PTGFRNQ9P2B2 879 aa4.12□□□□□ -1.75
USP44-208ENST00000552440 ANGPTL2Q9UKU9 493 aa4.12□□□□□ -1.75
USP44-208ENST00000552440 VPS4AQ9UN37 437 aa4.12□□□□□ -1.75
USP44-208ENST00000552440 PLA2G4CQ9UP65 541 aa4.12□□□□□ -1.75
USP44-208ENST00000552440 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.12□□□□□ -1.75
USP44-208ENST00000552440 DMRT1Q9Y5R6 373 aa4.12□□□□□ -1.75
USP44-208ENST00000552440 CYP3A7-CYP3A51PA0A087WV96 503 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 A0A0B4J293 547 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 A0A1W2PN81 502 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 CGB1A6NKQ9 187 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 WRBO00258 174 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 SMAD9O15198 467 aaKnown RBP4.11□□□□□ -1.75
USP44-208ENST00000552440 LANCL1O43813 399 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 MFAP3LO75121 409 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 GLCEO94923 617 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 AGTP01019 485 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 HEXAP06865 529 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 LINGO3P0C6S8 592 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 TROVE2P10155 538 aaKnown RBP eCLIP4.11□□□□□ -1.75
USP44-208ENST00000552440 IL7RP16871 459 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 GCSHP23434 173 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 PRPH2P23942 346 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 CYP3A7P24462 503 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 CHRNA7P36544 502 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 STARP49675 285 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 CLCN4P51793 760 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 SUCLG1P53597 346 aaKnown RBP4.11□□□□□ -1.75
USP44-208ENST00000552440 AIF1P55008 147 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 TAS2R40P59535 323 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 PDK4Q16654 411 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 UGCGQ16739 394 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 COL28A1Q2UY09 1125 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 AASDHQ4L235 1098 aaPredicted RBP4.11□□□□□ -1.75
USP44-208ENST00000552440 BCL7AQ4VC05 210 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 LIN9Q5TKA1 542 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 PODNL1Q6PEZ8 512 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 SYNE4Q8N205 404 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 METTL25Q8N6Q8 603 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 OR52B4Q8NGK2 314 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 SLC22A8Q8TCC7 542 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 ATP8B4Q8TF62 1192 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 HAS1Q92839 578 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 NXNL1Q96CM4 212 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 MARS2Q96GW9 593 aaKnown RBP4.11□□□□□ -1.75
USP44-208ENST00000552440 MSANTD3Q96H12 275 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 RPGRIP1Q96KN7 1286 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 C7orf34Q96L11 122 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 PCYT2Q99447 389 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 PTDSS2Q9BVG9 487 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 PINK1Q9BXM7 581 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 CRNKL1Q9BZJ0 848 aaKnown RBP4.11□□□□□ -1.75
USP44-208ENST00000552440 SPATC1LQ9H0A9 340 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 UBQLN3Q9H347 655 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 PLEKHA4Q9H4M7 779 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 FAM120CQ9NX05 1096 aaKnown RBP4.11□□□□□ -1.75
USP44-208ENST00000552440 MYO3BQ8WXR4 1341 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 KIAA1217Q5T5P2 1943 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 KIF21AQ7Z4S6 1674 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 A0A0U1RQJ8 604 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 A0A0U1RQS6 177 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 A0A1B0GTQ1 180 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 CCDC195A0A1B0GUA6 201 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 C3orf70A6NLC5 250 aaPredicted RBP4.11□□□□□ -1.75
USP44-208ENST00000552440 C17orf100A8MU93 164 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 SPECC1L-ADORA2AF8WAN1 911 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 K7ERQ8 282 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 FOXN1O15353 648 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 ZWINTO95229 277 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 SPDEFO95238 335 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 TCF4P15884 667 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 RPA2P15927 270 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 GCFC2P16383 781 aaKnown RBP4.11□□□□□ -1.75
USP44-208ENST00000552440 DRD4P21917 467 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 MMP8P22894 467 aa4.11□□□□□ -1.75
USP44-208ENST00000552440 ACAT1P24752 427 aaKnown RBP4.11□□□□□ -1.75
USP44-208ENST00000552440 EPHA3P29320 983 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms