RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 SERPINA13PQ6UXR4 307 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 C15orf52Q6ZUT6 534 aaKnown RBP3.28□□□□□ -1.88
CCNT1-203ENST00000550457 MON1BQ7L1V2 547 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 BCDIN3DQ7Z5W3 292 aaKnown RBP3.28□□□□□ -1.88
CCNT1-203ENST00000550457 PRUNE1Q86TP1 453 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 ITIH5Q86UX2 942 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 DNAAF5Q86Y56 855 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 ZNF280BQ86YH2 543 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 CAMK1DQ8IU85 385 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 IQCF2Q8IXL9 164 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 ANKRD13AQ8IZ07 590 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 DEFB107AQ8IZN7 70 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 PGAM4Q8N0Y7 254 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 MIER2Q8N344 545 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 TTC39CQ8N584 583 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 SLC25A41Q8N5S1 370 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 ANKFN1Q8N957 763 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 SNX31Q8N9S9 440 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 LEMD2Q8NC56 503 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 MCUQ8NE86 351 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 FBXO36Q8NEA4 188 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 FBXL13Q8NEE6 735 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 BEST2Q8NFU1 509 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 GSDMBQ8TAX9 411 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 RAB2BQ8WUD1 216 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 CRYGNQ8WXF5 182 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 USP6NLQ92738 828 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 ISOC1Q96CN7 298 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 MAGED4Q96JG8 741 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 SERAC1Q96JX3 654 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 CNBD2Q96M20 576 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 SLITRK1Q96PX8 696 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 PPP1R10Q96QC0 940 aaKnown RBP3.28□□□□□ -1.88
CCNT1-203ENST00000550457 ZNF347Q96SE7 839 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 ARPC5LQ9BPX5 153 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 EIF2AK1Q9BQI3 630 aaKnown RBP3.28□□□□□ -1.88
CCNT1-203ENST00000550457 HEMGNQ9BXL5 484 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 MROQ9BYG7 248 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 SLC13A1Q9BZW2 595 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 TRIM15Q9C019 465 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 ZNF518BQ9C0D4 1074 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 PAIP1Q9H074 479 aaKnown RBP3.28□□□□□ -1.88
CCNT1-203ENST00000550457 GBA3Q9H227 469 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 VPS33BQ9H267 617 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 TPK1Q9H3S4 243 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 SMYD3Q9H7B4 428 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 CXorf36Q9H7Y0 433 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 JMJD4Q9H9V9 463 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 GPN2Q9H9Y4 310 aaPredicted RBP3.28□□□□□ -1.88
CCNT1-203ENST00000550457 EFCAB1Q9HAE3 211 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 CXorf21Q9HAI6 301 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 UGT1A7Q9HAW7 530 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 UGT1A10Q9HAW8 530 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 UGT1A8Q9HAW9 530 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 PRDM16Q9HAZ2 1276 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 SLC38A10Q9HBR0 1119 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 ANKHQ9HCJ1 492 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 TMEM8AQ9HCN3 771 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 XAB2Q9HCS7 855 aaKnown RBP3.28□□□□□ -1.88
CCNT1-203ENST00000550457 HMG20AQ9NP66 347 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 DIABLOQ9NR28 239 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 HOMER2Q9NSB8 354 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 SLC38A7Q9NVC3 462 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 DNAJC17Q9NVM6 304 aaKnown RBP3.28□□□□□ -1.88
CCNT1-203ENST00000550457 PNPOQ9NVS9 261 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 SLC17A7Q9P2U7 560 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 COPG2Q9UBF2 871 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 RIMS3Q9UJD0 308 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 MID2Q9UJV3 735 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 DNPEPQ9ULA0 475 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 ERVK-11Q9UQG0 969 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 NIP7Q9Y221 180 aaKnown RBP eCLIP3.28□□□□□ -1.88
CCNT1-203ENST00000550457 TEX264Q9Y6I9 313 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 CACNA1SQ13698 1873 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 CCDC88AQ3V6T2 1871 aa3.28□□□□□ -1.88
CCNT1-203ENST00000550457 RGPD2P0DJD1 1756 aa3.28□□□□□ -1.89
CCNT1-203ENST00000550457 hCG_1818297A0A087WSY0 165 aa3.27□□□□□ -1.89
CCNT1-203ENST00000550457 IGKV6D-41A0A0C4DH26 115 aa3.27□□□□□ -1.89
CCNT1-203ENST00000550457 ISPDA4D126 451 aa3.27□□□□□ -1.89
CCNT1-203ENST00000550457 ARHGEF35A5YM69 484 aa3.27□□□□□ -1.89
CCNT1-203ENST00000550457 FAM172BPA6NC97 362 aa3.27□□□□□ -1.89
CCNT1-203ENST00000550457 SAGE2PA6NJ88 616 aa3.27□□□□□ -1.89
CCNT1-203ENST00000550457 SAC3D1A6NKF1 404 aa3.27□□□□□ -1.89
CCNT1-203ENST00000550457 KPNA7A9QM74 516 aa3.27□□□□□ -1.89
CCNT1-203ENST00000550457 TRIM49D1C9J1S8 452 aa3.27□□□□□ -1.89
CCNT1-203ENST00000550457 CLDN25C9JDP6 229 aa3.27□□□□□ -1.89
CCNT1-203ENST00000550457 KBTBD13C9JR72 458 aa3.27□□□□□ -1.89
CCNT1-203ENST00000550457 H0YCG3 227 aa3.27□□□□□ -1.89
CCNT1-203ENST00000550457 K7EPI3 171 aa3.27□□□□□ -1.89
CCNT1-203ENST00000550457 SGK1O00141 431 aa3.27□□□□□ -1.89
CCNT1-203ENST00000550457 PSMD12O00232 456 aaPredicted RBP3.27□□□□□ -1.89
CCNT1-203ENST00000550457 XPO1O14980 1071 aaKnown RBP3.27□□□□□ -1.89
CCNT1-203ENST00000550457 KMOO15229 486 aa3.27□□□□□ -1.89
CCNT1-203ENST00000550457 MAGEB3O15480 346 aa3.27□□□□□ -1.89
CCNT1-203ENST00000550457 PAPSS1O43252 624 aaPredicted RBP3.27□□□□□ -1.89
CCNT1-203ENST00000550457 GLRA3O75311 464 aa3.27□□□□□ -1.89
CCNT1-203ENST00000550457 RFPL1O75677 317 aa3.27□□□□□ -1.89
CCNT1-203ENST00000550457 RSL1D1O76021 490 aaKnown RBP3.27□□□□□ -1.89
CCNT1-203ENST00000550457 LYPLA2O95372 231 aa3.27□□□□□ -1.89
CCNT1-203ENST00000550457 KRT75O95678 551 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms