RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 E5RI56 91 aa18.87■□□□□ 0.61
DDX54-207ENST00000550016 AHSGP02765 367 aa18.87■□□□□ 0.61
DDX54-207ENST00000550016 GSTA2P09210 222 aa18.87■□□□□ 0.61
DDX54-207ENST00000550016 HOXB3P14651 431 aaPredicted RBP18.87■□□□□ 0.61
DDX54-207ENST00000550016 TYRP1P17643 537 aa18.87■□□□□ 0.61
DDX54-207ENST00000550016 CCKBRP32239 447 aa18.87■□□□□ 0.61
DDX54-207ENST00000550016 CSF2RBP32927 897 aa18.87■□□□□ 0.61
DDX54-207ENST00000550016 MAGEA4P43358 317 aa18.87■□□□□ 0.61
DDX54-207ENST00000550016 LIMK2P53671 638 aa18.87■□□□□ 0.61
DDX54-207ENST00000550016 VRK3Q8IV63 474 aa18.87■□□□□ 0.61
DDX54-207ENST00000550016 SLITRK4Q8IW52 837 aa18.87■□□□□ 0.61
DDX54-207ENST00000550016 IFT81Q8WYA0 676 aa18.87■□□□□ 0.61
DDX54-207ENST00000550016 ATXN7L3BQ96GX2 97 aa18.87■□□□□ 0.61
DDX54-207ENST00000550016 STRADBQ9C0K7 418 aa18.87■□□□□ 0.61
DDX54-207ENST00000550016 NRSN2Q9GZP1 204 aa18.87■□□□□ 0.61
DDX54-207ENST00000550016 SEMA6CQ9H3T2 930 aa18.87■□□□□ 0.61
DDX54-207ENST00000550016 PCM1Q15154 2024 aa18.86■□□□□ 0.61
DDX54-207ENST00000550016 IGHV5-10-1A0A0J9YXX1 117 aa18.86■□□□□ 0.61
DDX54-207ENST00000550016 GABRB3P28472 473 aa18.86■□□□□ 0.61
DDX54-207ENST00000550016 SSTR1P30872 391 aa18.86■□□□□ 0.61
DDX54-207ENST00000550016 PLCL1Q15111 1095 aa18.86■□□□□ 0.61
DDX54-207ENST00000550016 PHF19Q5T6S3 580 aa18.86■□□□□ 0.61
DDX54-207ENST00000550016 KLHL35Q6PF15 583 aa18.86■□□□□ 0.61
DDX54-207ENST00000550016 CAPN12Q6ZSI9 719 aa18.86■□□□□ 0.61
DDX54-207ENST00000550016 CEP128Q6ZU80 1094 aa18.86■□□□□ 0.61
DDX54-207ENST00000550016 C3orf62Q6ZUJ4 267 aa18.86■□□□□ 0.61
DDX54-207ENST00000550016 PLXDC1Q8IUK5 500 aa18.86■□□□□ 0.61
DDX54-207ENST00000550016 ACVR1CQ8NER5 493 aa18.86■□□□□ 0.61
DDX54-207ENST00000550016 KCNJ9Q92806 393 aa18.86■□□□□ 0.61
DDX54-207ENST00000550016 GATA6Q92908 595 aa18.86■□□□□ 0.61
DDX54-207ENST00000550016 FAM136AQ96C01 138 aa18.86■□□□□ 0.61
DDX54-207ENST00000550016 LIN37Q96GY3 246 aaPredicted RBP18.86■□□□□ 0.61
DDX54-207ENST00000550016 C9orf72Q96LT7 481 aa18.86■□□□□ 0.61
DDX54-207ENST00000550016 AARSD1Q9BTE6 412 aaKnown RBP18.86■□□□□ 0.61
DDX54-207ENST00000550016 ZMYND15Q9H091 742 aa18.86■□□□□ 0.61
DDX54-207ENST00000550016 TSPYL1Q9H0U9 437 aa18.86■□□□□ 0.61
DDX54-207ENST00000550016 TRIT1Q9H3H1 467 aaKnown RBP18.86■□□□□ 0.61
DDX54-207ENST00000550016 ZFATQ9P243 1243 aa18.86■□□□□ 0.61
DDX54-207ENST00000550016 PDP2Q9P2J9 529 aa18.86■□□□□ 0.61
DDX54-207ENST00000550016 KLHL42Q9P2K6 505 aa18.86■□□□□ 0.61
DDX54-207ENST00000550016 GALPQ9UBC7 116 aa18.86■□□□□ 0.61
DDX54-207ENST00000550016 MTRF1LQ9UGC7 380 aaKnown RBP18.86■□□□□ 0.61
DDX54-207ENST00000550016 ASF1AQ9Y294 204 aa18.86■□□□□ 0.61
DDX54-207ENST00000550016 ANKRD12Q6UB98 2062 aa18.85■□□□□ 0.61
DDX54-207ENST00000550016 CCDC187A0A096LP49 1063 aa18.85■□□□□ 0.61
DDX54-207ENST00000550016 CLCN7P51798 805 aa18.85■□□□□ 0.61
DDX54-207ENST00000550016 ABRQ12979 859 aa18.85■□□□□ 0.61
DDX54-207ENST00000550016 TRA2AQ13595 282 aaKnown RBP eCLIP18.85■□□□□ 0.61
DDX54-207ENST00000550016 GBX1Q14549 363 aa18.85■□□□□ 0.61
DDX54-207ENST00000550016 CYS1Q717R9 158 aa18.85■□□□□ 0.61
DDX54-207ENST00000550016 TBC1D21Q8IYX1 336 aa18.85■□□□□ 0.61
DDX54-207ENST00000550016 ZBTB2Q8N680 514 aa18.85■□□□□ 0.61
DDX54-207ENST00000550016 OR5AR1Q8NGP9 310 aa18.85■□□□□ 0.61
DDX54-207ENST00000550016 JPH3Q8WXH2 748 aaPredicted RBP18.85■□□□□ 0.61
DDX54-207ENST00000550016 TMEM9Q9P0T7 183 aa18.85■□□□□ 0.61
DDX54-207ENST00000550016 SLC17A6Q9P2U8 582 aa18.85■□□□□ 0.61
DDX54-207ENST00000550016 POLG2Q9UHN1 485 aa18.85■□□□□ 0.61
DDX54-207ENST00000550016 DHRS7Q9Y394 339 aa18.85■□□□□ 0.61
DDX54-207ENST00000550016 ATP5DP30049 168 aa18.84■□□□□ 0.61
DDX54-207ENST00000550016 GPX6P59796 221 aa18.84■□□□□ 0.61
DDX54-207ENST00000550016 PRKG2Q13237 762 aa18.84■□□□□ 0.61
DDX54-207ENST00000550016 CUL1Q13616 776 aa18.84■□□□□ 0.61
DDX54-207ENST00000550016 RTP5Q14D33 572 aa18.84■□□□□ 0.61
DDX54-207ENST00000550016 TTLL9Q3SXZ7 439 aa18.84■□□□□ 0.61
DDX54-207ENST00000550016 SLC26A11Q86WA9 606 aa18.84■□□□□ 0.61
DDX54-207ENST00000550016 IFT20Q8IY31 132 aa18.84■□□□□ 0.61
DDX54-207ENST00000550016 OR5K2Q8NHB8 316 aa18.84■□□□□ 0.61
DDX54-207ENST00000550016 LCN9Q8WX39 176 aa18.84■□□□□ 0.61
DDX54-207ENST00000550016 RSC1A1Q92681 617 aa18.84■□□□□ 0.61
DDX54-207ENST00000550016 INPP5DQ92835 1189 aa18.84■□□□□ 0.61
DDX54-207ENST00000550016 CCDC74BQ96LY2 380 aa18.84■□□□□ 0.61
DDX54-207ENST00000550016 HGH1Q9BTY7 390 aa18.84■□□□□ 0.61
DDX54-207ENST00000550016 TMEM121BQ9BXQ6 578 aaPredicted RBP18.84■□□□□ 0.61
DDX54-207ENST00000550016 RAB33BQ9H082 229 aa18.84■□□□□ 0.61
DDX54-207ENST00000550016 TFB2MQ9H5Q4 396 aaKnown RBP18.84■□□□□ 0.61
DDX54-207ENST00000550016 NSMCE4AQ9NXX6 385 aa18.84■□□□□ 0.61
DDX54-207ENST00000550016 EPHA6Q9UF33 1036 aa18.84■□□□□ 0.61
DDX54-207ENST00000550016 CORO1CQ9ULV4 474 aaPredicted RBP18.84■□□□□ 0.61
DDX54-207ENST00000550016 MED16Q9Y2X0 877 aa18.84■□□□□ 0.61
DDX54-207ENST00000550016 MN1Q10571 1320 aaPredicted RBP18.83■□□□□ 0.61
DDX54-207ENST00000550016 VPS26AO75436 327 aa18.83■□□□□ 0.6
DDX54-207ENST00000550016 C9P02748 559 aa18.83■□□□□ 0.6
DDX54-207ENST00000550016 RPN2P04844 631 aa18.83■□□□□ 0.6
DDX54-207ENST00000550016 RHOXF2BP0C7M4 288 aa18.83■□□□□ 0.6
DDX54-207ENST00000550016 THRAP10827 490 aa18.83■□□□□ 0.6
DDX54-207ENST00000550016 MPSTP25325 297 aa18.83■□□□□ 0.6
DDX54-207ENST00000550016 CAPZBP47756 277 aa18.83■□□□□ 0.6
DDX54-207ENST00000550016 LSSP48449 732 aa18.83■□□□□ 0.6
DDX54-207ENST00000550016 UGT3A1Q6NUS8 523 aa18.83■□□□□ 0.6
DDX54-207ENST00000550016 UNC5DQ6UXZ4 953 aa18.83■□□□□ 0.6
DDX54-207ENST00000550016 RAB11FIP2Q7L804 512 aa18.83■□□□□ 0.6
DDX54-207ENST00000550016 SIDT2Q8NBJ9 832 aaKnown RBP18.83■□□□□ 0.6
DDX54-207ENST00000550016 LRRN4CLQ8ND94 238 aa18.83■□□□□ 0.6
DDX54-207ENST00000550016 OR4E2Q8NGC2 313 aa18.83■□□□□ 0.6
DDX54-207ENST00000550016 CFAP61Q8NHU2 1237 aa18.83■□□□□ 0.6
DDX54-207ENST00000550016 WDR36Q8NI36 951 aaKnown RBP18.83■□□□□ 0.6
DDX54-207ENST00000550016 NXPE2Q96DL1 559 aa18.83■□□□□ 0.6
DDX54-207ENST00000550016 ZDHHC12Q96GR4 267 aa18.83■□□□□ 0.6
DDX54-207ENST00000550016 FMO2Q99518 471 aa18.83■□□□□ 0.6
DDX54-207ENST00000550016 NDNQ99608 321 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms