RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 CRLS1Q9UJA2 301 aa14.96□□□□□ -0.01
RAB5C-205ENST00000550013 HEBP2Q9Y5Z4 205 aa14.96□□□□□ -0.01
RAB5C-205ENST00000550013 CREBBPQ92793 2442 aa14.95□□□□□ -0.02
RAB5C-205ENST00000550013 CCDC66A2RUB6 948 aa14.95□□□□□ -0.02
RAB5C-205ENST00000550013 C2orf81A6NN90 581 aa14.95□□□□□ -0.02
RAB5C-205ENST00000550013 HACD1B0YJ81 288 aa14.95□□□□□ -0.02
RAB5C-205ENST00000550013 CCL22O00626 93 aa14.95□□□□□ -0.02
RAB5C-205ENST00000550013 KRT86O43790 486 aa14.95□□□□□ -0.02
RAB5C-205ENST00000550013 PYGMP11217 842 aa14.95□□□□□ -0.02
RAB5C-205ENST00000550013 RBL1P28749 1068 aa14.95□□□□□ -0.02
RAB5C-205ENST00000550013 PRDX3P30048 256 aaKnown RBP14.95□□□□□ -0.02
RAB5C-205ENST00000550013 ADRA1AP35348 466 aa14.95□□□□□ -0.02
RAB5C-205ENST00000550013 PRLHRP49683 370 aa14.95□□□□□ -0.02
RAB5C-205ENST00000550013 GEMP55040 296 aa14.95□□□□□ -0.02
RAB5C-205ENST00000550013 TMPRSS15P98073 1019 aa14.95□□□□□ -0.02
RAB5C-205ENST00000550013 NCF4Q15080 339 aa14.95□□□□□ -0.02
RAB5C-205ENST00000550013 TCEAL1Q15170 157 aa14.95□□□□□ -0.02
RAB5C-205ENST00000550013 RANBP10Q6VN20 620 aa14.95□□□□□ -0.02
RAB5C-205ENST00000550013 CCDC50Q8IVM0 306 aa14.95□□□□□ -0.02
RAB5C-205ENST00000550013 GLIS1Q8NBF1 620 aa14.95□□□□□ -0.02
RAB5C-205ENST00000550013 PHC3Q8NDX5 983 aa14.95□□□□□ -0.02
RAB5C-205ENST00000550013 C19orf60Q96EN9 201 aa14.95□□□□□ -0.02
RAB5C-205ENST00000550013 DCUN1D1Q96GG9 259 aa14.95□□□□□ -0.02
RAB5C-205ENST00000550013 HEMGNQ9BXL5 484 aa14.95□□□□□ -0.02
RAB5C-205ENST00000550013 PITPNM3Q9BZ71 974 aa14.95□□□□□ -0.02
RAB5C-205ENST00000550013 CUEDC1Q9NWM3 386 aaPredicted RBP14.95□□□□□ -0.02
RAB5C-205ENST00000550013 GPR83Q9NYM4 423 aa14.95□□□□□ -0.02
RAB5C-205ENST00000550013 ALG6Q9Y672 507 aa14.95□□□□□ -0.02
RAB5C-205ENST00000550013 SNRNP200O75643 2136 aaKnown RBP14.95□□□□□ -0.02
RAB5C-205ENST00000550013 C5orf60A6NFR6 353 aa14.94□□□□□ -0.02
RAB5C-205ENST00000550013 AGAP14A8MT82 685 aa14.94□□□□□ -0.02
RAB5C-205ENST00000550013 H7C0C1 242 aa14.94□□□□□ -0.02
RAB5C-205ENST00000550013 MATN2O00339 956 aa14.94□□□□□ -0.02
RAB5C-205ENST00000550013 MFAP3LO75121 409 aa14.94□□□□□ -0.02
RAB5C-205ENST00000550013 ANXA9O76027 345 aa14.94□□□□□ -0.02
RAB5C-205ENST00000550013 ATP5OP48047 213 aa14.94□□□□□ -0.02
RAB5C-205ENST00000550013 CDHR3Q6ZTQ4 885 aa14.94□□□□□ -0.02
RAB5C-205ENST00000550013 MED25Q71SY5 747 aa14.94□□□□□ -0.02
RAB5C-205ENST00000550013 KATNAL2Q8IYT4 538 aa14.94□□□□□ -0.02
RAB5C-205ENST00000550013 NXPE1Q8N323 547 aa14.94□□□□□ -0.02
RAB5C-205ENST00000550013 TMEM102Q8N9M5 508 aaPredicted RBP14.94□□□□□ -0.02
RAB5C-205ENST00000550013 PRR7Q8TB68 274 aa14.94□□□□□ -0.02
RAB5C-205ENST00000550013 PNPLA2Q96AD5 504 aa14.94□□□□□ -0.02
RAB5C-205ENST00000550013 RBM41Q96IZ5 413 aaKnown RBP14.94□□□□□ -0.02
RAB5C-205ENST00000550013 TRAPPC9Q96Q05 1148 aa14.94□□□□□ -0.02
RAB5C-205ENST00000550013 SMAD5Q99717 465 aaKnown RBP14.94□□□□□ -0.02
RAB5C-205ENST00000550013 ANP32EQ9BTT0 268 aa14.94□□□□□ -0.02
RAB5C-205ENST00000550013 OR52A5Q9H2C5 316 aa14.94□□□□□ -0.02
RAB5C-205ENST00000550013 XKR8Q9H6D3 395 aa14.94□□□□□ -0.02
RAB5C-205ENST00000550013 COG4Q9H9E3 785 aa14.94□□□□□ -0.02
RAB5C-205ENST00000550013 SYTL2Q9HCH5 934 aa14.94□□□□□ -0.02
RAB5C-205ENST00000550013 INTUQ9ULD6 942 aa14.94□□□□□ -0.02
RAB5C-205ENST00000550013 G3BP2Q9UN86 482 aaKnown RBP14.94□□□□□ -0.02
RAB5C-205ENST00000550013 MDC1Q14676 2089 aaKnown RBP14.93□□□□□ -0.02
RAB5C-205ENST00000550013 ZNF749O43361 778 aa14.93□□□□□ -0.02
RAB5C-205ENST00000550013 ZRANB2O95218 330 aaKnown RBP eCLIP14.93□□□□□ -0.02
RAB5C-205ENST00000550013 MSL3P1P0C860 447 aa14.93□□□□□ -0.02
RAB5C-205ENST00000550013 ATXN8OSP0DMR3 200 aa14.93□□□□□ -0.02
RAB5C-205ENST00000550013 RALBP11234 206 aa14.93□□□□□ -0.02
RAB5C-205ENST00000550013 ATP1B2P14415 290 aaPredicted RBP14.93□□□□□ -0.02
RAB5C-205ENST00000550013 PSMB4P28070 264 aa14.93□□□□□ -0.02
RAB5C-205ENST00000550013 PDHA2P29803 388 aa14.93□□□□□ -0.02
RAB5C-205ENST00000550013 OTX2P32243 289 aa14.93□□□□□ -0.02
RAB5C-205ENST00000550013 CDKN1CP49918 316 aaPredicted RBP14.93□□□□□ -0.02
RAB5C-205ENST00000550013 ZNF140P52738 457 aaPredicted RBP14.93□□□□□ -0.02
RAB5C-205ENST00000550013 RRADP55042 308 aa14.93□□□□□ -0.02
RAB5C-205ENST00000550013 MSLNQ13421 630 aaPredicted RBP14.93□□□□□ -0.02
RAB5C-205ENST00000550013 KYNUQ16719 465 aa14.93□□□□□ -0.02
RAB5C-205ENST00000550013 ZNF658BQ4V348 819 aaPredicted RBP14.93□□□□□ -0.02
RAB5C-205ENST00000550013 ZNF385CQ66K41 422 aaPredicted RBP14.93□□□□□ -0.02
RAB5C-205ENST00000550013 BBS12Q6ZW61 710 aa14.93□□□□□ -0.02
RAB5C-205ENST00000550013 TRIM73Q86UV7 250 aa14.93□□□□□ -0.02
RAB5C-205ENST00000550013 VSTM4Q8IW00 320 aa14.93□□□□□ -0.02
RAB5C-205ENST00000550013 RCOR2Q8IZ40 523 aa14.93□□□□□ -0.02
RAB5C-205ENST00000550013 ADGRF3Q8IZF5 1079 aa14.93□□□□□ -0.02
RAB5C-205ENST00000550013 OR52E1Q8NGJ3 308 aa14.93□□□□□ -0.02
RAB5C-205ENST00000550013 KRT35Q92764 455 aa14.93□□□□□ -0.02
RAB5C-205ENST00000550013 ULK4Q96C45 1275 aa14.93□□□□□ -0.02
RAB5C-205ENST00000550013 COPS8Q99627 209 aa14.93□□□□□ -0.02
RAB5C-205ENST00000550013 HGH1Q9BTY7 390 aa14.93□□□□□ -0.02
RAB5C-205ENST00000550013 SLC29A3Q9BZD2 475 aa14.93□□□□□ -0.02
RAB5C-205ENST00000550013 SLC7A5P2Q9GIP4 190 aa14.93□□□□□ -0.02
RAB5C-205ENST00000550013 SERTAD3Q9UJW9 196 aa14.93□□□□□ -0.02
RAB5C-205ENST00000550013 ANKRD12Q6UB98 2062 aa14.93□□□□□ -0.02
RAB5C-205ENST00000550013 LRBAP50851 2863 aa14.92□□□□□ -0.02
RAB5C-205ENST00000550013 C9J4A7 227 aa14.92□□□□□ -0.02
RAB5C-205ENST00000550013 E7EQ34 232 aa14.92□□□□□ -0.02
RAB5C-205ENST00000550013 CBFA2T2O43439 604 aa14.92□□□□□ -0.02
RAB5C-205ENST00000550013 KLF7O75840 302 aaPredicted RBP14.92□□□□□ -0.02
RAB5C-205ENST00000550013 DDAH2O95865 285 aa14.92□□□□□ -0.02
RAB5C-205ENST00000550013 TPM1P09493 284 aa14.92□□□□□ -0.02
RAB5C-205ENST00000550013 PRSS56P0CW18 603 aa14.92□□□□□ -0.02
RAB5C-205ENST00000550013 ITGALP20701 1170 aa14.92□□□□□ -0.02
RAB5C-205ENST00000550013 COL8A1P27658 744 aa14.92□□□□□ -0.02
RAB5C-205ENST00000550013 PRKG2Q13237 762 aa14.92□□□□□ -0.02
RAB5C-205ENST00000550013 PLEKHN1Q494U1 663 aaPredicted RBP14.92□□□□□ -0.02
RAB5C-205ENST00000550013 ITPRIPL1Q6GPH6 555 aa14.92□□□□□ -0.02
RAB5C-205ENST00000550013 SNX20Q7Z614 316 aa14.92□□□□□ -0.02
RAB5C-205ENST00000550013 MRGPREQ86SM8 312 aa14.92□□□□□ -0.02
RAB5C-205ENST00000550013 AMIGO1Q86WK6 493 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms