RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 RAPH1Q70E73 1250 aa20.69■□□□□ 0.9
VPS29-206ENST00000549578 TDRPQ86YL5 185 aa20.69■□□□□ 0.9
VPS29-206ENST00000549578 PHC3Q8NDX5 983 aa20.69■□□□□ 0.9
VPS29-206ENST00000549578 CFAP61Q8NHU2 1237 aa20.69■□□□□ 0.9
VPS29-206ENST00000549578 NETO1Q8TDF5 533 aa20.69■□□□□ 0.9
VPS29-206ENST00000549578 ANKRD49Q8WVL7 239 aa20.69■□□□□ 0.9
VPS29-206ENST00000549578 TFGQ92734 400 aaPredicted RBP20.69■□□□□ 0.9
VPS29-206ENST00000549578 ZBTB9Q96C00 473 aa20.69■□□□□ 0.9
VPS29-206ENST00000549578 CXorf40BQ96DE9 158 aa20.69■□□□□ 0.9
VPS29-206ENST00000549578 CNDP2Q96KP4 475 aaKnown RBP20.69■□□□□ 0.9
VPS29-206ENST00000549578 PPCSQ9HAB8 311 aa20.69■□□□□ 0.9
VPS29-206ENST00000549578 POPDC3Q9HBV1 291 aa20.69■□□□□ 0.9
VPS29-206ENST00000549578 SNX15Q9NRS6 342 aa20.69■□□□□ 0.9
VPS29-206ENST00000549578 CPNE7Q9UBL6 633 aa20.69■□□□□ 0.9
VPS29-206ENST00000549578 RASGRF2O14827 1237 aa20.68■□□□□ 0.9
VPS29-206ENST00000549578 CBFA2T3O75081 653 aa20.68■□□□□ 0.9
VPS29-206ENST00000549578 WISP3O95389 354 aaPredicted RBP20.68■□□□□ 0.9
VPS29-206ENST00000549578 TSPAN12O95859 305 aa20.68■□□□□ 0.9
VPS29-206ENST00000549578 CBSLP0DN79 551 aa20.68■□□□□ 0.9
VPS29-206ENST00000549578 ENO3P13929 434 aaPredicted RBP20.68■□□□□ 0.9
VPS29-206ENST00000549578 CBSP35520 551 aa20.68■□□□□ 0.9
VPS29-206ENST00000549578 PLA2G5P39877 138 aa20.68■□□□□ 0.9
VPS29-206ENST00000549578 RGS4P49798 205 aa20.68■□□□□ 0.9
VPS29-206ENST00000549578 SERPINB8P50452 374 aa20.68■□□□□ 0.9
VPS29-206ENST00000549578 IL2P60568 153 aa20.68■□□□□ 0.9
VPS29-206ENST00000549578 UBE2IP63279 158 aaKnown RBP20.68■□□□□ 0.9
VPS29-206ENST00000549578 NR0B2Q15466 257 aa20.68■□□□□ 0.9
VPS29-206ENST00000549578 LGSNQ5TDP6 509 aa20.68■□□□□ 0.9
VPS29-206ENST00000549578 TRIM48Q8IWZ4 208 aa20.68■□□□□ 0.9
VPS29-206ENST00000549578 IQCKQ8N0W5 287 aa20.68■□□□□ 0.9
VPS29-206ENST00000549578 ZIM3Q96PE6 472 aa20.68■□□□□ 0.9
VPS29-206ENST00000549578 EURLQ9NYK6 297 aa20.68■□□□□ 0.9
VPS29-206ENST00000549578 FTSJ1Q9UET6 329 aa20.68■□□□□ 0.9
VPS29-206ENST00000549578 PADI4Q9UM07 663 aa20.68■□□□□ 0.9
VPS29-206ENST00000549578 ASF1AQ9Y294 204 aa20.68■□□□□ 0.9
VPS29-206ENST00000549578 IQANK1A0A1B0GTG1 560 aa20.68■□□□□ 0.9
VPS29-206ENST00000549578 CDH16O75309 829 aa20.68■□□□□ 0.9
VPS29-206ENST00000549578 LDOC1O95751 146 aaPredicted RBP20.68■□□□□ 0.9
VPS29-206ENST00000549578 SLC35E2BP0CK96 405 aa20.68■□□□□ 0.9
VPS29-206ENST00000549578 XRCC1P18887 633 aaPredicted RBP20.68■□□□□ 0.9
VPS29-206ENST00000549578 TYK2P29597 1187 aa20.68■□□□□ 0.9
VPS29-206ENST00000549578 HHEXQ03014 270 aa20.68■□□□□ 0.9
VPS29-206ENST00000549578 ZNF844Q08AG5 666 aa20.68■□□□□ 0.9
VPS29-206ENST00000549578 PPM1JQ5JR12 505 aa20.68■□□□□ 0.9
VPS29-206ENST00000549578 CYHR1Q6ZMK1 362 aa20.68■□□□□ 0.9
VPS29-206ENST00000549578 PIP4P1Q86T03 277 aa20.68■□□□□ 0.9
VPS29-206ENST00000549578 SLC9B2Q86UD5 537 aa20.68■□□□□ 0.9
VPS29-206ENST00000549578 ALYREFQ86V81 257 aaKnown RBP20.68■□□□□ 0.9
VPS29-206ENST00000549578 CYP4X1Q8N118 509 aa20.68■□□□□ 0.9
VPS29-206ENST00000549578 BAHD1Q8TBE0 780 aaPredicted RBP20.68■□□□□ 0.9
VPS29-206ENST00000549578 SYTL2Q9HCH5 934 aa20.68■□□□□ 0.9
VPS29-206ENST00000549578 CFAP54Q96N23 3096 aa20.67■□□□□ 0.9
VPS29-206ENST00000549578 COL5A1P20908 1838 aaPredicted RBP20.67■□□□□ 0.9
VPS29-206ENST00000549578 EIF3FO00303 357 aaPredicted RBP20.67■□□□□ 0.9
VPS29-206ENST00000549578 VIPP01282 170 aa20.67■□□□□ 0.9
VPS29-206ENST00000549578 CRABP2P29373 138 aa20.67■□□□□ 0.9
VPS29-206ENST00000549578 FASLGP48023 281 aa20.67■□□□□ 0.9
VPS29-206ENST00000549578 RPIAP49247 311 aa20.67■□□□□ 0.9
VPS29-206ENST00000549578 CSRP3P50461 194 aa20.67■□□□□ 0.9
VPS29-206ENST00000549578 DAB2P98082 770 aa20.67■□□□□ 0.9
VPS29-206ENST00000549578 BIRC2Q13490 618 aa20.67■□□□□ 0.9
VPS29-206ENST00000549578 GUSBP11Q6P575 273 aa20.67■□□□□ 0.9
VPS29-206ENST00000549578 NEK10Q6ZWH5 1172 aa20.67■□□□□ 0.9
VPS29-206ENST00000549578 ZNF761Q86XN6 746 aaPredicted RBP20.67■□□□□ 0.9
VPS29-206ENST00000549578 SPATA6LQ8N4H0 392 aa20.67■□□□□ 0.9
VPS29-206ENST00000549578 OR5AR1Q8NGP9 310 aa20.67■□□□□ 0.9
VPS29-206ENST00000549578 ISL2Q96A47 359 aa20.67■□□□□ 0.9
VPS29-206ENST00000549578 MTBPQ96DY7 904 aa20.67■□□□□ 0.9
VPS29-206ENST00000549578 FERD3LQ96RJ6 166 aa20.67■□□□□ 0.9
VPS29-206ENST00000549578 ROPN1BQ9BZX4 212 aaPredicted RBP20.67■□□□□ 0.9
VPS29-206ENST00000549578 UNKQ9C0B0 810 aaKnown RBP20.67■□□□□ 0.9
VPS29-206ENST00000549578 ROPN1Q9HAT0 212 aaPredicted RBP20.67■□□□□ 0.9
VPS29-206ENST00000549578 POT1Q9NUX5 634 aa20.67■□□□□ 0.9
VPS29-206ENST00000549578 RNF215Q9Y6U7 377 aa20.67■□□□□ 0.9
VPS29-206ENST00000549578 CEP250Q9BV73 2442 aa20.66■□□□□ 0.9
VPS29-206ENST00000549578 A0A096LPK6 155 aa20.66■□□□□ 0.9
VPS29-206ENST00000549578 CPED1A4D0V7 1026 aa20.66■□□□□ 0.9
VPS29-206ENST00000549578 FOXO6A8MYZ6 492 aa20.66■□□□□ 0.9
VPS29-206ENST00000549578 PPM1DO15297 605 aa20.66■□□□□ 0.9
VPS29-206ENST00000549578 MATN4O95460 622 aa20.66■□□□□ 0.9
VPS29-206ENST00000549578 C2P06681 752 aa20.66■□□□□ 0.9
VPS29-206ENST00000549578 CCDC166P0CW27 439 aa20.66■□□□□ 0.9
VPS29-206ENST00000549578 MPC1LP0DKB6 136 aa20.66■□□□□ 0.9
VPS29-206ENST00000549578 CKMT1AP12532 417 aa20.66■□□□□ 0.9
VPS29-206ENST00000549578 MAGEA12P43365 314 aa20.66■□□□□ 0.9
VPS29-206ENST00000549578 DNAJC3Q13217 504 aa20.66■□□□□ 0.9
VPS29-206ENST00000549578 KRT33BQ14525 404 aa20.66■□□□□ 0.9
VPS29-206ENST00000549578 CASP8Q14790 479 aa20.66■□□□□ 0.9
VPS29-206ENST00000549578 RASA2Q15283 850 aa20.66■□□□□ 0.9
VPS29-206ENST00000549578 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.66■□□□□ 0.9
VPS29-206ENST00000549578 MYO1HQ8N1T3 1032 aa20.66■□□□□ 0.9
VPS29-206ENST00000549578 NKAPQ8N5F7 415 aaKnown RBP20.66■□□□□ 0.9
VPS29-206ENST00000549578 MZB1Q8WU39 189 aa20.66■□□□□ 0.9
VPS29-206ENST00000549578 HGH1Q9BTY7 390 aa20.66■□□□□ 0.9
VPS29-206ENST00000549578 SLC40A1Q9NP59 571 aa20.66■□□□□ 0.9
VPS29-206ENST00000549578 NCKIPSDQ9NZQ3 722 aa20.66■□□□□ 0.9
VPS29-206ENST00000549578 LRIT1Q9P2V4 623 aa20.66■□□□□ 0.9
VPS29-206ENST00000549578 HEBP2Q9Y5Z4 205 aa20.66■□□□□ 0.9
VPS29-206ENST00000549578 PIEZO1Q92508 2521 aa20.65■□□□□ 0.9
VPS29-206ENST00000549578 GLB1P16278 677 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms