RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 CPSF2Q9P2I0 782 aaKnown RBP3.79□□□□□ -1.8
APAF1-208ENST00000549007 PLEKHB1Q9UF11 243 aaPredicted RBP3.79□□□□□ -1.8
APAF1-208ENST00000549007 COL4A4P53420 1690 aaPredicted RBP3.79□□□□□ -1.8
APAF1-208ENST00000549007 VWA8A3KMH1 1905 aa3.79□□□□□ -1.8
APAF1-208ENST00000549007 A0A1W2PPC1 479 aa3.79□□□□□ -1.8
APAF1-208ENST00000549007 CLDN5O00501 218 aa3.79□□□□□ -1.8
APAF1-208ENST00000549007 TEX28O15482 410 aa3.79□□□□□ -1.8
APAF1-208ENST00000549007 ODC1P11926 461 aa3.79□□□□□ -1.8
APAF1-208ENST00000549007 KRT5P13647 590 aa3.79□□□□□ -1.8
APAF1-208ENST00000549007 EPCAMP16422 314 aa3.79□□□□□ -1.8
APAF1-208ENST00000549007 GABRB1P18505 474 aa3.79□□□□□ -1.8
APAF1-208ENST00000549007 GPD2P43304 727 aa3.79□□□□□ -1.8
APAF1-208ENST00000549007 SLC15A1P46059 708 aa3.79□□□□□ -1.8
APAF1-208ENST00000549007 NDST1P52848 882 aa3.79□□□□□ -1.8
APAF1-208ENST00000549007 UBASH3AP57075 661 aa3.79□□□□□ -1.8
APAF1-208ENST00000549007 TPM4P67936 248 aa3.79□□□□□ -1.8
APAF1-208ENST00000549007 YWHAHQ04917 246 aaPredicted RBP3.79□□□□□ -1.8
APAF1-208ENST00000549007 VEPH1Q14D04 833 aa3.79□□□□□ -1.8
APAF1-208ENST00000549007 USP41Q3LFD5 358 aa3.79□□□□□ -1.8
APAF1-208ENST00000549007 SLC39A12Q504Y0 691 aa3.79□□□□□ -1.8
APAF1-208ENST00000549007 ANKRD16Q6P6B7 361 aa3.79□□□□□ -1.8
APAF1-208ENST00000549007 GBP6Q6ZN66 633 aa3.79□□□□□ -1.8
APAF1-208ENST00000549007 GET4Q7L5D6 327 aaPredicted RBP3.79□□□□□ -1.8
APAF1-208ENST00000549007 BCDIN3DQ7Z5W3 292 aaKnown RBP3.79□□□□□ -1.8
APAF1-208ENST00000549007 PEG10Q86TG7 708 aaKnown RBP3.79□□□□□ -1.8
APAF1-208ENST00000549007 KIAA2013Q8IYS2 634 aa3.79□□□□□ -1.8
APAF1-208ENST00000549007 C12orf29Q8N999 325 aa3.79□□□□□ -1.8
APAF1-208ENST00000549007 ATAD1Q8NBU5 361 aa3.79□□□□□ -1.8
APAF1-208ENST00000549007 SRFBP1Q8NEF9 429 aaKnown RBP3.79□□□□□ -1.8
APAF1-208ENST00000549007 APPL2Q8NEU8 664 aa3.79□□□□□ -1.8
APAF1-208ENST00000549007 ANKRD20A12PQ8NF67 263 aa3.79□□□□□ -1.8
APAF1-208ENST00000549007 LNX1Q8TBB1 728 aaPredicted RBP3.79□□□□□ -1.8
APAF1-208ENST00000549007 TMEM174Q8WUU8 243 aa3.79□□□□□ -1.8
APAF1-208ENST00000549007 ATOH1Q92858 354 aaPredicted RBP3.79□□□□□ -1.8
APAF1-208ENST00000549007 ELOVL4Q9GZR5 314 aa3.79□□□□□ -1.8
APAF1-208ENST00000549007 Q9N2J8 555 aa3.79□□□□□ -1.8
APAF1-208ENST00000549007 DDX43Q9NXZ2 648 aaKnown RBP3.79□□□□□ -1.8
APAF1-208ENST00000549007 EHD3Q9NZN3 535 aa3.79□□□□□ -1.8
APAF1-208ENST00000549007 FBXL5Q9UKA1 691 aa3.79□□□□□ -1.8
APAF1-208ENST00000549007 GTF3C4Q9UKN8 822 aa3.79□□□□□ -1.8
APAF1-208ENST00000549007 MYBPHLA2RUH7 354 aa3.78□□□□□ -1.8
APAF1-208ENST00000549007 A8MXQ7 604 aa3.78□□□□□ -1.8
APAF1-208ENST00000549007 C5orf67F2Z3F1 127 aa3.78□□□□□ -1.8
APAF1-208ENST00000549007 STX10O60499 249 aa3.78□□□□□ -1.8
APAF1-208ENST00000549007 VDRP11473 427 aa3.78□□□□□ -1.8
APAF1-208ENST00000549007 CCDC130P13994 396 aa3.78□□□□□ -1.8
APAF1-208ENST00000549007 SELLP14151 372 aa3.78□□□□□ -1.8
APAF1-208ENST00000549007 ST6GAL1P15907 406 aa3.78□□□□□ -1.8
APAF1-208ENST00000549007 IGFBP2P18065 325 aa3.78□□□□□ -1.8
APAF1-208ENST00000549007 ADORA2BP29275 332 aa3.78□□□□□ -1.8
APAF1-208ENST00000549007 TLX1P31314 330 aaPredicted RBP3.78□□□□□ -1.8
APAF1-208ENST00000549007 CTNNA1P35221 906 aaKnown RBP3.78□□□□□ -1.8
APAF1-208ENST00000549007 POLR2FP61218 127 aaKnown RBP3.78□□□□□ -1.8
APAF1-208ENST00000549007 CUL2Q13617 745 aa3.78□□□□□ -1.8
APAF1-208ENST00000549007 FGFBP1Q14512 234 aa3.78□□□□□ -1.8
APAF1-208ENST00000549007 SGSM1Q2NKQ1 1148 aa3.78□□□□□ -1.8
APAF1-208ENST00000549007 MDH1BQ5I0G3 518 aa3.78□□□□□ -1.8
APAF1-208ENST00000549007 PCID2Q5JVF3 399 aa3.78□□□□□ -1.8
APAF1-208ENST00000549007 DPY19L2P1Q6NXN4 242 aa3.78□□□□□ -1.8
APAF1-208ENST00000549007 TMEM270Q6UE05 265 aa3.78□□□□□ -1.8
APAF1-208ENST00000549007 PARS2Q7L3T8 475 aaKnown RBP3.78□□□□□ -1.8
APAF1-208ENST00000549007 TADA2BQ86TJ2 420 aa3.78□□□□□ -1.8
APAF1-208ENST00000549007 LRRC52Q8N7C0 313 aa3.78□□□□□ -1.8
APAF1-208ENST00000549007 VN1R2Q8NFZ6 395 aa3.78□□□□□ -1.8
APAF1-208ENST00000549007 SNX25Q9H3E2 840 aa3.78□□□□□ -1.8
APAF1-208ENST00000549007 DEF6Q9H4E7 631 aa3.78□□□□□ -1.8
APAF1-208ENST00000549007 OPA3Q9H6K4 179 aa3.78□□□□□ -1.8
APAF1-208ENST00000549007 MRPL17Q9NRX2 175 aaKnown RBP3.78□□□□□ -1.8
APAF1-208ENST00000549007 CISHQ9NSE2 258 aa3.78□□□□□ -1.8
APAF1-208ENST00000549007 PLK2Q9NYY3 685 aa3.78□□□□□ -1.8
APAF1-208ENST00000549007 FBXL17Q9UF56 701 aa3.78□□□□□ -1.8
APAF1-208ENST00000549007 DNAJC12Q9UKB3 198 aa3.78□□□□□ -1.8
APAF1-208ENST00000549007 PADI1Q9ULC6 663 aa3.78□□□□□ -1.8
APAF1-208ENST00000549007 BARX2Q9UMQ3 279 aaPredicted RBP3.78□□□□□ -1.8
APAF1-208ENST00000549007 XIRP2A4UGR9 3374 aa3.78□□□□□ -1.8
APAF1-208ENST00000549007 UNC80Q8N2C7 3258 aa3.78□□□□□ -1.8
APAF1-208ENST00000549007 WDR27A2RRH5 827 aa3.78□□□□□ -1.8
APAF1-208ENST00000549007 TMEM189-UBE2V1I3L0A0 370 aa3.78□□□□□ -1.8
APAF1-208ENST00000549007 TRAPPC3O43617 180 aa3.78□□□□□ -1.8
APAF1-208ENST00000549007 PEX1O43933 1283 aa3.78□□□□□ -1.8
APAF1-208ENST00000549007 RFPL2O75678 378 aa3.78□□□□□ -1.8
APAF1-208ENST00000549007 NOL4O94818 638 aa3.78□□□□□ -1.8
APAF1-208ENST00000549007 VNN2O95498 520 aa3.78□□□□□ -1.8
APAF1-208ENST00000549007 TPM2P07951 284 aa3.78□□□□□ -1.8
APAF1-208ENST00000549007 CTSAP10619 480 aa3.78□□□□□ -1.8
APAF1-208ENST00000549007 FOSL2P15408 326 aa3.78□□□□□ -1.8
APAF1-208ENST00000549007 SP100P23497 879 aaPredicted RBP3.78□□□□□ -1.8
APAF1-208ENST00000549007 KLRC2P26717 231 aa3.78□□□□□ -1.8
APAF1-208ENST00000549007 GTF2H1P32780 548 aa3.78□□□□□ -1.8
APAF1-208ENST00000549007 IDUAP35475 653 aa3.78□□□□□ -1.8
APAF1-208ENST00000549007 CPOXP36551 454 aa3.78□□□□□ -1.8
APAF1-208ENST00000549007 GNL1P36915 607 aaPredicted RBP3.78□□□□□ -1.8
APAF1-208ENST00000549007 PSMB10P40306 273 aa3.78□□□□□ -1.8
APAF1-208ENST00000549007 AP3M2P53677 418 aa3.78□□□□□ -1.8
APAF1-208ENST00000549007 CACNA2D1P54289 1103 aa3.78□□□□□ -1.8
APAF1-208ENST00000549007 CLDN2P57739 230 aa3.78□□□□□ -1.8
APAF1-208ENST00000549007 EEFSECP57772 596 aaKnown RBP3.78□□□□□ -1.8
APAF1-208ENST00000549007 EPS8Q12929 822 aa3.78□□□□□ -1.8
APAF1-208ENST00000549007 ASTE1Q2TB18 679 aaPredicted RBP3.78□□□□□ -1.8
APAF1-208ENST00000549007 TAF3Q5VWG9 929 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms