RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 TCEAL4Q96EI5 215 aa18.17■□□□□ 0.5
PRPF40B-208ENST00000548436 PPP3R2Q96LZ3 170 aa18.17■□□□□ 0.5
PRPF40B-208ENST00000548436 PPM1MQ96MI6 270 aa18.17■□□□□ 0.5
PRPF40B-208ENST00000548436 COPS8Q99627 209 aa18.17■□□□□ 0.5
PRPF40B-208ENST00000548436 NTMT1Q9BV86 223 aa18.17■□□□□ 0.5
PRPF40B-208ENST00000548436 MRPS26Q9BYN8 205 aaKnown RBP18.17■□□□□ 0.5
PRPF40B-208ENST00000548436 CPEB1Q9BZB8 566 aaKnown RBP18.17■□□□□ 0.5
PRPF40B-208ENST00000548436 KLQ9UEF7 1012 aa18.17■□□□□ 0.5
PRPF40B-208ENST00000548436 CXorf51AA0A1B0GTR3 108 aa18.16■□□□□ 0.5
PRPF40B-208ENST00000548436 GRXCR2A6NFK2 248 aa18.16■□□□□ 0.5
PRPF40B-208ENST00000548436 PDLIM1O00151 329 aa18.16■□□□□ 0.5
PRPF40B-208ENST00000548436 PLOD2O00469 737 aa18.16■□□□□ 0.5
PRPF40B-208ENST00000548436 TIMP1P01033 207 aa18.16■□□□□ 0.5
PRPF40B-208ENST00000548436 ATP6V1B1P15313 513 aa18.16■□□□□ 0.5
PRPF40B-208ENST00000548436 JAK1P23458 1154 aa18.16■□□□□ 0.5
PRPF40B-208ENST00000548436 HRH2P25021 359 aa18.16■□□□□ 0.5
PRPF40B-208ENST00000548436 FASP25445 335 aa18.16■□□□□ 0.5
PRPF40B-208ENST00000548436 HTR1EP28566 365 aa18.16■□□□□ 0.5
PRPF40B-208ENST00000548436 RPL5P46777 297 aaKnown RBP18.16■□□□□ 0.5
PRPF40B-208ENST00000548436 OR4D2P58180 307 aa18.16■□□□□ 0.5
PRPF40B-208ENST00000548436 HMGCS1Q01581 520 aa18.16■□□□□ 0.5
PRPF40B-208ENST00000548436 APOFQ13790 326 aa18.16■□□□□ 0.5
PRPF40B-208ENST00000548436 ARHGEF7Q14155 803 aa18.16■□□□□ 0.5
PRPF40B-208ENST00000548436 PTGR1Q14914 329 aa18.16■□□□□ 0.5
PRPF40B-208ENST00000548436 LRRC26Q2I0M4 334 aa18.16■□□□□ 0.5
PRPF40B-208ENST00000548436 CARD16Q5EG05 197 aa18.16■□□□□ 0.5
PRPF40B-208ENST00000548436 SLC30A9Q6PML9 568 aa18.16■□□□□ 0.5
PRPF40B-208ENST00000548436 RALGPS2Q86X27 583 aaPredicted RBP18.16■□□□□ 0.5
PRPF40B-208ENST00000548436 CBR4Q8N4T8 237 aa18.16■□□□□ 0.5
PRPF40B-208ENST00000548436 KLHL23Q8NBE8 558 aa18.16■□□□□ 0.5
PRPF40B-208ENST00000548436 CHST14Q8NCH0 376 aa18.16■□□□□ 0.5
PRPF40B-208ENST00000548436 TMPRSS11EQ9UL52 423 aa18.16■□□□□ 0.5
PRPF40B-208ENST00000548436 NEUROG3Q9Y4Z2 214 aa18.16■□□□□ 0.5
PRPF40B-208ENST00000548436 DLGAP1O14490 977 aa18.16■□□□□ 0.5
PRPF40B-208ENST00000548436 GRM6O15303 877 aa18.16■□□□□ 0.5
PRPF40B-208ENST00000548436 RGS14O43566 566 aa18.16■□□□□ 0.5
PRPF40B-208ENST00000548436 VARSP26640 1264 aaKnown RBP18.16■□□□□ 0.5
PRPF40B-208ENST00000548436 CRY1Q16526 586 aa18.16■□□□□ 0.5
PRPF40B-208ENST00000548436 FXNQ16595 210 aa18.16■□□□□ 0.5
PRPF40B-208ENST00000548436 SGO1Q5FBB7 561 aa18.16■□□□□ 0.5
PRPF40B-208ENST00000548436 INTS11Q5TA45 600 aaKnown RBP18.16■□□□□ 0.5
PRPF40B-208ENST00000548436 GALNT15Q8N3T1 639 aa18.16■□□□□ 0.5
PRPF40B-208ENST00000548436 MYLIPQ8WY64 445 aa18.16■□□□□ 0.5
PRPF40B-208ENST00000548436 EPB41L1Q9H4G0 881 aa18.16■□□□□ 0.5
PRPF40B-208ENST00000548436 RPF2Q9H7B2 306 aaKnown RBP18.16■□□□□ 0.5
PRPF40B-208ENST00000548436 BRD9Q9H8M2 597 aa18.16■□□□□ 0.5
PRPF40B-208ENST00000548436 SLC25A13Q9UJS0 675 aa18.16■□□□□ 0.5
PRPF40B-208ENST00000548436 ZNF490Q9ULM2 529 aaPredicted RBP18.16■□□□□ 0.5
PRPF40B-208ENST00000548436 PRRC2BQ5JSZ5 2229 aaKnown RBP18.15■□□□□ 0.5
PRPF40B-208ENST00000548436 IGLV3-16A0A075B6K0 115 aa18.15■□□□□ 0.5
PRPF40B-208ENST00000548436 SMIM31A0A1B0GVY4 71 aa18.15■□□□□ 0.5
PRPF40B-208ENST00000548436 NEDD8-MDP1E9PL57 170 aa18.15■□□□□ 0.5
PRPF40B-208ENST00000548436 STK16O75716 305 aa18.15■□□□□ 0.5
PRPF40B-208ENST00000548436 POP4O95707 220 aaKnown RBP18.15■□□□□ 0.5
PRPF40B-208ENST00000548436 ADH1AP07327 375 aa18.15■□□□□ 0.5
PRPF40B-208ENST00000548436 EBLN1P0CF75 366 aa18.15■□□□□ 0.5
PRPF40B-208ENST00000548436 CBSLP0DN79 551 aa18.15■□□□□ 0.5
PRPF40B-208ENST00000548436 EPB42P16452 691 aa18.15■□□□□ 0.5
PRPF40B-208ENST00000548436 EPORP19235 508 aa18.15■□□□□ 0.5
PRPF40B-208ENST00000548436 CBSP35520 551 aa18.15■□□□□ 0.5
PRPF40B-208ENST00000548436 CCT8P50990 548 aa18.15■□□□□ 0.5
PRPF40B-208ENST00000548436 MTPNP58546 118 aa18.15■□□□□ 0.5
PRPF40B-208ENST00000548436 PLIN5Q00G26 463 aa18.15■□□□□ 0.5
PRPF40B-208ENST00000548436 ZXDCQ2QGD7 858 aaPredicted RBP18.15■□□□□ 0.5
PRPF40B-208ENST00000548436 Q6ZVU0 165 aa18.15■□□□□ 0.5
PRPF40B-208ENST00000548436 TRIM46Q7Z4K8 759 aa18.15■□□□□ 0.5
PRPF40B-208ENST00000548436 NCSTNQ92542 709 aa18.15■□□□□ 0.5
PRPF40B-208ENST00000548436 CENPNQ96H22 339 aaPredicted RBP18.15■□□□□ 0.5
PRPF40B-208ENST00000548436 CGREF1Q99674 301 aa18.15■□□□□ 0.5
PRPF40B-208ENST00000548436 B4GALT6Q9UBX8 382 aa18.15■□□□□ 0.5
PRPF40B-208ENST00000548436 TRPS1Q9UHF7 1281 aa18.15■□□□□ 0.5
PRPF40B-208ENST00000548436 CD84Q9UIB8 345 aa18.15■□□□□ 0.5
PRPF40B-208ENST00000548436 PDE10AQ9Y233 779 aa18.15■□□□□ 0.5
PRPF40B-208ENST00000548436 SLC28A1O00337 649 aa18.14■□□□□ 0.5
PRPF40B-208ENST00000548436 ULK1O75385 1050 aa18.14■□□□□ 0.5
PRPF40B-208ENST00000548436 ETS2P15036 469 aa18.14■□□□□ 0.5
PRPF40B-208ENST00000548436 NELFEP18615 380 aaKnown RBP18.14■□□□□ 0.5
PRPF40B-208ENST00000548436 SPINT3P49223 89 aa18.14■□□□□ 0.5
PRPF40B-208ENST00000548436 RPIAP49247 311 aa18.14■□□□□ 0.5
PRPF40B-208ENST00000548436 NADK2Q4G0N4 442 aa18.14■□□□□ 0.5
PRPF40B-208ENST00000548436 METTL2BQ6P1Q9 378 aaKnown RBP18.14■□□□□ 0.5
PRPF40B-208ENST00000548436 RNF165Q6ZSG1 346 aa18.14■□□□□ 0.5
PRPF40B-208ENST00000548436 DET1Q7L5Y6 550 aa18.14■□□□□ 0.5
PRPF40B-208ENST00000548436 RGL4Q8IZJ4 473 aa18.14■□□□□ 0.5
PRPF40B-208ENST00000548436 PAPD5Q8NDF8 572 aaKnown RBP18.14■□□□□ 0.5
PRPF40B-208ENST00000548436 BIRC7Q96CA5 298 aa18.14■□□□□ 0.5
PRPF40B-208ENST00000548436 GRIP2Q9C0E4 1043 aa18.14■□□□□ 0.5
PRPF40B-208ENST00000548436 NOTCH4Q99466 2003 aa18.14■□□□□ 0.5
PRPF40B-208ENST00000548436 IFRD1O00458 451 aaPredicted RBP18.14■□□□□ 0.49
PRPF40B-208ENST00000548436 MANBAO00462 879 aa18.14■□□□□ 0.49
PRPF40B-208ENST00000548436 EFCAB14O75071 495 aa18.14■□□□□ 0.49
PRPF40B-208ENST00000548436 WDR47O94967 919 aa18.14■□□□□ 0.49
PRPF40B-208ENST00000548436 ANXA5P08758 320 aa18.14■□□□□ 0.49
PRPF40B-208ENST00000548436 AOAHP28039 575 aa18.14■□□□□ 0.49
PRPF40B-208ENST00000548436 PLOD1Q02809 727 aaPredicted RBP18.14■□□□□ 0.49
PRPF40B-208ENST00000548436 PWP1Q13610 501 aa18.14■□□□□ 0.49
PRPF40B-208ENST00000548436 AASDHQ4L235 1098 aaPredicted RBP18.14■□□□□ 0.49
PRPF40B-208ENST00000548436 NAIF1Q69YI7 327 aaPredicted RBP18.14■□□□□ 0.49
PRPF40B-208ENST00000548436 PRR23BQ6ZRT6 265 aa18.14■□□□□ 0.49
PRPF40B-208ENST00000548436 PACRGLQ8N7B6 248 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms