RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 ZBTB2Q8N680 514 aa16.39■□□□□ 0.21
CCDC38-203ENST00000546803 ACVR1CQ8NER5 493 aa16.39■□□□□ 0.21
CCDC38-203ENST00000546803 OR4D9Q8NGE8 314 aa16.39■□□□□ 0.21
CCDC38-203ENST00000546803 RHOXF2Q9BQY4 288 aa16.39■□□□□ 0.21
CCDC38-203ENST00000546803 STRADBQ9C0K7 418 aa16.39■□□□□ 0.21
CCDC38-203ENST00000546803 TRIT1Q9H3H1 467 aaKnown RBP16.39■□□□□ 0.21
CCDC38-203ENST00000546803 RDH14Q9HBH5 336 aa16.39■□□□□ 0.21
CCDC38-203ENST00000546803 LRRC4CQ9HCJ2 640 aa16.39■□□□□ 0.21
CCDC38-203ENST00000546803 POLG2Q9UHN1 485 aa16.39■□□□□ 0.21
CCDC38-203ENST00000546803 SLC24A2Q9UI40 661 aa16.39■□□□□ 0.21
CCDC38-203ENST00000546803 DNAH14Q0VDD8 3507 aa16.39■□□□□ 0.21
CCDC38-203ENST00000546803 SPTBN4Q9H254 2564 aa16.38■□□□□ 0.21
CCDC38-203ENST00000546803 KDM1AO60341 852 aa16.38■□□□□ 0.21
CCDC38-203ENST00000546803 VPS26AO75436 327 aa16.38■□□□□ 0.21
CCDC38-203ENST00000546803 RPN2P04844 631 aa16.38■□□□□ 0.21
CCDC38-203ENST00000546803 F7P08709 466 aaPredicted RBP16.38■□□□□ 0.21
CCDC38-203ENST00000546803 CD9P21926 228 aa16.38■□□□□ 0.21
CCDC38-203ENST00000546803 ECHS1P30084 290 aa16.38■□□□□ 0.21
CCDC38-203ENST00000546803 STX2P32856 288 aa16.38■□□□□ 0.21
CCDC38-203ENST00000546803 DEKP35659 375 aaKnown RBP16.38■□□□□ 0.21
CCDC38-203ENST00000546803 SKIV2L2P42285 1042 aaKnown RBP16.38■□□□□ 0.21
CCDC38-203ENST00000546803 MAPK9P45984 424 aa16.38■□□□□ 0.21
CCDC38-203ENST00000546803 CLCN7P51798 805 aa16.38■□□□□ 0.21
CCDC38-203ENST00000546803 PDX1P52945 283 aa16.38■□□□□ 0.21
CCDC38-203ENST00000546803 LIMK2P53671 638 aa16.38■□□□□ 0.21
CCDC38-203ENST00000546803 GPX6P59796 221 aa16.38■□□□□ 0.21
CCDC38-203ENST00000546803 TRA2AQ13595 282 aaKnown RBP eCLIP16.38■□□□□ 0.21
CCDC38-203ENST00000546803 PLCL1Q15111 1095 aa16.38■□□□□ 0.21
CCDC38-203ENST00000546803 UNC5DQ6UXZ4 953 aa16.38■□□□□ 0.21
CCDC38-203ENST00000546803 PLXDC1Q8IUK5 500 aa16.38■□□□□ 0.21
CCDC38-203ENST00000546803 VRK3Q8IV63 474 aa16.38■□□□□ 0.21
CCDC38-203ENST00000546803 SLITRK4Q8IW52 837 aa16.38■□□□□ 0.21
CCDC38-203ENST00000546803 LRRN4CLQ8ND94 238 aa16.38■□□□□ 0.21
CCDC38-203ENST00000546803 PHC3Q8NDX5 983 aa16.38■□□□□ 0.21
CCDC38-203ENST00000546803 NCSTNQ92542 709 aa16.38■□□□□ 0.21
CCDC38-203ENST00000546803 INPP5DQ92835 1189 aa16.38■□□□□ 0.21
CCDC38-203ENST00000546803 NUDT22Q9BRQ3 303 aa16.38■□□□□ 0.21
CCDC38-203ENST00000546803 ZMYND15Q9H091 742 aa16.38■□□□□ 0.21
CCDC38-203ENST00000546803 TAS2R13Q9NYV9 303 aa16.38■□□□□ 0.21
CCDC38-203ENST00000546803 PDP2Q9P2J9 529 aa16.38■□□□□ 0.21
CCDC38-203ENST00000546803 EPHA6Q9UF33 1036 aa16.38■□□□□ 0.21
CCDC38-203ENST00000546803 MED16Q9Y2X0 877 aa16.38■□□□□ 0.21
CCDC38-203ENST00000546803 DHRS7Q9Y394 339 aa16.38■□□□□ 0.21
CCDC38-203ENST00000546803 ENTPD2Q9Y5L3 495 aa16.38■□□□□ 0.21
CCDC38-203ENST00000546803 FAM159BA6NKW6 160 aa16.37■□□□□ 0.21
CCDC38-203ENST00000546803 HOXB3P14651 431 aaPredicted RBP16.37■□□□□ 0.21
CCDC38-203ENST00000546803 TYRP1P17643 537 aa16.37■□□□□ 0.21
CCDC38-203ENST00000546803 CSF2RBP32927 897 aa16.37■□□□□ 0.21
CCDC38-203ENST00000546803 CAPZBP47756 277 aa16.37■□□□□ 0.21
CCDC38-203ENST00000546803 CFHR1Q03591 330 aa16.37■□□□□ 0.21
CCDC38-203ENST00000546803 EIF3IQ13347 325 aaKnown RBP16.37■□□□□ 0.21
CCDC38-203ENST00000546803 CAMK2BQ13554 666 aa16.37■□□□□ 0.21
CCDC38-203ENST00000546803 NEK10Q6ZWH5 1172 aa16.37■□□□□ 0.21
CCDC38-203ENST00000546803 STRA8Q7Z7C7 330 aa16.37■□□□□ 0.21
CCDC38-203ENST00000546803 B3GNT8Q7Z7M8 397 aa16.37■□□□□ 0.21
CCDC38-203ENST00000546803 MARCH9Q86YJ5 346 aa16.37■□□□□ 0.21
CCDC38-203ENST00000546803 EIF1ADQ8N9N8 165 aaKnown RBP16.37■□□□□ 0.21
CCDC38-203ENST00000546803 OR5K2Q8NHB8 316 aa16.37■□□□□ 0.21
CCDC38-203ENST00000546803 FAM136AQ96C01 138 aa16.37■□□□□ 0.21
CCDC38-203ENST00000546803 LIN37Q96GY3 246 aaPredicted RBP16.37■□□□□ 0.21
CCDC38-203ENST00000546803 FOPNLQ96NB1 174 aa16.37■□□□□ 0.21
CCDC38-203ENST00000546803 NDNQ99608 321 aa16.37■□□□□ 0.21
CCDC38-203ENST00000546803 NRSN2Q9GZP1 204 aa16.37■□□□□ 0.21
CCDC38-203ENST00000546803 RAB33BQ9H082 229 aa16.37■□□□□ 0.21
CCDC38-203ENST00000546803 TFB2MQ9H5Q4 396 aaKnown RBP16.37■□□□□ 0.21
CCDC38-203ENST00000546803 OGFRQ9NZT2 677 aa16.37■□□□□ 0.21
CCDC38-203ENST00000546803 TXNDC16Q9P2K2 825 aa16.37■□□□□ 0.21
CCDC38-203ENST00000546803 SLC17A6Q9P2U8 582 aa16.37■□□□□ 0.21
CCDC38-203ENST00000546803 GALPQ9UBC7 116 aa16.37■□□□□ 0.21
CCDC38-203ENST00000546803 DCHS1Q96JQ0 3298 aa16.36■□□□□ 0.21
CCDC38-203ENST00000546803 IGHV5-10-1A0A0J9YXX1 117 aa16.36■□□□□ 0.21
CCDC38-203ENST00000546803 EIF3FO00303 357 aaPredicted RBP16.36■□□□□ 0.21
CCDC38-203ENST00000546803 CBSLP0DN79 551 aa16.36■□□□□ 0.21
CCDC38-203ENST00000546803 ENO3P13929 434 aaPredicted RBP16.36■□□□□ 0.21
CCDC38-203ENST00000546803 PHBP35232 272 aa16.36■□□□□ 0.21
CCDC38-203ENST00000546803 CBSP35520 551 aa16.36■□□□□ 0.21
CCDC38-203ENST00000546803 ABRQ12979 859 aa16.36■□□□□ 0.21
CCDC38-203ENST00000546803 NAB1Q13506 487 aa16.36■□□□□ 0.21
CCDC38-203ENST00000546803 SLMAPQ14BN4 828 aa16.36■□□□□ 0.21
CCDC38-203ENST00000546803 ACSBG2Q5FVE4 666 aa16.36■□□□□ 0.21
CCDC38-203ENST00000546803 TEX35Q5T0J7 233 aa16.36■□□□□ 0.21
CCDC38-203ENST00000546803 FAM45BPQ6NSW5 357 aa16.36■□□□□ 0.21
CCDC38-203ENST00000546803 TTC23LQ6PF05 361 aa16.36■□□□□ 0.21
CCDC38-203ENST00000546803 ZNF574Q6ZN55 896 aaPredicted RBP16.36■□□□□ 0.21
CCDC38-203ENST00000546803 TMPRSS9Q7Z410 1059 aa16.36■□□□□ 0.21
CCDC38-203ENST00000546803 ZC3HC1Q86WB0 502 aaKnown RBP16.36■□□□□ 0.21
CCDC38-203ENST00000546803 SIDT2Q8NBJ9 832 aaKnown RBP16.36■□□□□ 0.21
CCDC38-203ENST00000546803 OR52E1Q8NGJ3 308 aa16.36■□□□□ 0.21
CCDC38-203ENST00000546803 OR5AR1Q8NGP9 310 aa16.36■□□□□ 0.21
CCDC38-203ENST00000546803 FAM45AQ8TCE6 357 aa16.36■□□□□ 0.21
CCDC38-203ENST00000546803 SKA2Q8WVK7 121 aaPredicted RBP16.36■□□□□ 0.21
CCDC38-203ENST00000546803 LCN9Q8WX39 176 aa16.36■□□□□ 0.21
CCDC38-203ENST00000546803 ZDHHC12Q96GR4 267 aa16.36■□□□□ 0.21
CCDC38-203ENST00000546803 ATXN7L3BQ96GX2 97 aa16.36■□□□□ 0.21
CCDC38-203ENST00000546803 GPR21Q99679 349 aa16.36■□□□□ 0.21
CCDC38-203ENST00000546803 CPNE1Q99829 537 aa16.36■□□□□ 0.21
CCDC38-203ENST00000546803 HGH1Q9BTY7 390 aa16.36■□□□□ 0.21
CCDC38-203ENST00000546803 SEMA6CQ9H3T2 930 aa16.36■□□□□ 0.21
CCDC38-203ENST00000546803 RHOJQ9H4E5 214 aa16.36■□□□□ 0.21
CCDC38-203ENST00000546803 SMYD2Q9NRG4 433 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 379.6 ms