RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 TCRBV7S2A1N4TA0A589 114 aa9.1□□□□□ -0.95
YBX3-218ENST00000546298 CDC14CA4D256 554 aa9.1□□□□□ -0.95
YBX3-218ENST00000546298 SLC9B1P1A6NJY1 282 aa9.1□□□□□ -0.95
YBX3-218ENST00000546298 C2orf74A8MZ97 194 aa9.1□□□□□ -0.95
YBX3-218ENST00000546298 MKRN2OSH3BPM6 223 aa9.1□□□□□ -0.95
YBX3-218ENST00000546298 TERTO14746 1132 aaKnown RBP9.1□□□□□ -0.95
YBX3-218ENST00000546298 ARHGAP6O43182 974 aa9.1□□□□□ -0.95
YBX3-218ENST00000546298 SCRG1O75711 98 aa9.1□□□□□ -0.95
YBX3-218ENST00000546298 SUN1O94901 812 aa9.1□□□□□ -0.95
YBX3-218ENST00000546298 NTRK1P04629 796 aa9.1□□□□□ -0.95
YBX3-218ENST00000546298 OR56A5P0C7T3 313 aa9.1□□□□□ -0.95
YBX3-218ENST00000546298 F8A1P23610 371 aa9.1□□□□□ -0.95
YBX3-218ENST00000546298 ADRA1DP25100 572 aa9.1□□□□□ -0.95
YBX3-218ENST00000546298 PREPP48147 710 aa9.1□□□□□ -0.95
YBX3-218ENST00000546298 CDKN1CP49918 316 aaPredicted RBP9.1□□□□□ -0.95
YBX3-218ENST00000546298 CSRP3P50461 194 aa9.1□□□□□ -0.95
YBX3-218ENST00000546298 KPNA2P52292 529 aaKnown RBP9.1□□□□□ -0.95
YBX3-218ENST00000546298 KCNAB1Q14722 419 aa9.1□□□□□ -0.95
YBX3-218ENST00000546298 AFTPHQ6ULP2 937 aa9.1□□□□□ -0.95
YBX3-218ENST00000546298 C4orf22Q6V702 233 aa9.1□□□□□ -0.95
YBX3-218ENST00000546298 PACS1Q6VY07 963 aa9.1□□□□□ -0.95
YBX3-218ENST00000546298 AMIGO1Q86WK6 493 aa9.1□□□□□ -0.95
YBX3-218ENST00000546298 PIANPQ8IYJ0 282 aa9.1□□□□□ -0.95
YBX3-218ENST00000546298 LILRA3Q8N6C8 439 aaPredicted RBP9.1□□□□□ -0.95
YBX3-218ENST00000546298 CLDN19Q8N6F1 224 aa9.1□□□□□ -0.95
YBX3-218ENST00000546298 PHC3Q8NDX5 983 aa9.1□□□□□ -0.95
YBX3-218ENST00000546298 CT55Q8WUE5 264 aa9.1□□□□□ -0.95
YBX3-218ENST00000546298 MAIP1Q8WWC4 291 aa9.1□□□□□ -0.95
YBX3-218ENST00000546298 ATG4AQ8WYN0 398 aa9.1□□□□□ -0.95
YBX3-218ENST00000546298 CPT1BQ92523 772 aa9.1□□□□□ -0.95
YBX3-218ENST00000546298 ELMO1Q92556 727 aa9.1□□□□□ -0.95
YBX3-218ENST00000546298 PEX13Q92968 403 aa9.1□□□□□ -0.95
YBX3-218ENST00000546298 MR1Q95460 341 aa9.1□□□□□ -0.95
YBX3-218ENST00000546298 LRFN5Q96NI6 719 aa9.1□□□□□ -0.95
YBX3-218ENST00000546298 RANBP9Q96S59 729 aa9.1□□□□□ -0.95
YBX3-218ENST00000546298 TSSK1BQ9BXA7 367 aa9.1□□□□□ -0.95
YBX3-218ENST00000546298 PIH1D1Q9NWS0 290 aaKnown RBP9.1□□□□□ -0.95
YBX3-218ENST00000546298 PAK5Q9P286 719 aa9.1□□□□□ -0.95
YBX3-218ENST00000546298 POLG2Q9UHN1 485 aa9.1□□□□□ -0.95
YBX3-218ENST00000546298 SERTAD3Q9UJW9 196 aa9.1□□□□□ -0.95
YBX3-218ENST00000546298 ASF1AQ9Y294 204 aa9.1□□□□□ -0.95
YBX3-218ENST00000546298 ASPMQ8IZT6 3477 aa9.09□□□□□ -0.95
YBX3-218ENST00000546298 A0A0U1RQJ8 604 aa9.09□□□□□ -0.95
YBX3-218ENST00000546298 CCDC78A2IDD5 438 aa9.09□□□□□ -0.95
YBX3-218ENST00000546298 CCDC162PA2VCL2 907 aa9.09□□□□□ -0.95
YBX3-218ENST00000546298 AP3B1O00203 1094 aa9.09□□□□□ -0.95
YBX3-218ENST00000546298 BTN3A3O00478 584 aa9.09□□□□□ -0.95
YBX3-218ENST00000546298 NRDCO43847 1150 aa9.09□□□□□ -0.95
YBX3-218ENST00000546298 RFPL1O75677 317 aa9.09□□□□□ -0.95
YBX3-218ENST00000546298 ZIC2O95409 532 aaPredicted RBP9.09□□□□□ -0.95
YBX3-218ENST00000546298 TIAF1O95411 115 aa9.09□□□□□ -0.95
YBX3-218ENST00000546298 HBQ1P09105 142 aa9.09□□□□□ -0.95
YBX3-218ENST00000546298 MSL3P1P0C860 447 aa9.09□□□□□ -0.95
YBX3-218ENST00000546298 PTPN4P29074 926 aa9.09□□□□□ -0.95
YBX3-218ENST00000546298 PDHA2P29803 388 aa9.09□□□□□ -0.95
YBX3-218ENST00000546298 PRDX3P30048 256 aaKnown RBP9.09□□□□□ -0.95
YBX3-218ENST00000546298 FOXN2P32314 431 aa9.09□□□□□ -0.95
YBX3-218ENST00000546298 SHMT2P34897 504 aa9.09□□□□□ -0.95
YBX3-218ENST00000546298 ARCN1P48444 511 aaKnown RBP9.09□□□□□ -0.95
YBX3-218ENST00000546298 PRAMEP78395 509 aa9.09□□□□□ -0.95
YBX3-218ENST00000546298 NFKB2Q00653 900 aa9.09□□□□□ -0.95
YBX3-218ENST00000546298 SEMA5AQ13591 1074 aa9.09□□□□□ -0.95
YBX3-218ENST00000546298 BOP1Q14137 746 aaKnown RBP9.09□□□□□ -0.95
YBX3-218ENST00000546298 OASLQ15646 514 aaKnown RBP9.09□□□□□ -0.95
YBX3-218ENST00000546298 GPR19Q15760 415 aa9.09□□□□□ -0.95
YBX3-218ENST00000546298 CCNG2Q16589 344 aa9.09□□□□□ -0.95
YBX3-218ENST00000546298 ZNF658BQ4V348 819 aaPredicted RBP9.09□□□□□ -0.95
YBX3-218ENST00000546298 SYTL3Q4VX76 610 aa9.09□□□□□ -0.95
YBX3-218ENST00000546298 CCDC38Q502W7 563 aa9.09□□□□□ -0.95
YBX3-218ENST00000546298 LACTB2Q53H82 288 aaPredicted RBP9.09□□□□□ -0.95
YBX3-218ENST00000546298 FASTKD1Q53R41 847 aaKnown RBP9.09□□□□□ -0.95
YBX3-218ENST00000546298 AARS2Q5JTZ9 985 aaKnown RBP9.09□□□□□ -0.95
YBX3-218ENST00000546298 TSTD2Q5T7W7 516 aa9.09□□□□□ -0.95
YBX3-218ENST00000546298 TCTN3Q6NUS6 607 aa9.09□□□□□ -0.95
YBX3-218ENST00000546298 SYVN1Q86TM6 617 aa9.09□□□□□ -0.95
YBX3-218ENST00000546298 TBC1D21Q8IYX1 336 aa9.09□□□□□ -0.95
YBX3-218ENST00000546298 OR52E1Q8NGJ3 308 aa9.09□□□□□ -0.95
YBX3-218ENST00000546298 C1orf54Q8WWF1 131 aa9.09□□□□□ -0.95
YBX3-218ENST00000546298 THAP4Q8WY91 577 aa9.09□□□□□ -0.95
YBX3-218ENST00000546298 N4BP2L2Q92802 583 aaPredicted RBP9.09□□□□□ -0.95
YBX3-218ENST00000546298 HDAC10Q969S8 669 aa9.09□□□□□ -0.95
YBX3-218ENST00000546298 ZNF501Q96CX3 271 aaPredicted RBP9.09□□□□□ -0.95
YBX3-218ENST00000546298 RNF31Q96EP0 1072 aa9.09□□□□□ -0.95
YBX3-218ENST00000546298 ABHD17AQ96GS6 310 aa9.09□□□□□ -0.95
YBX3-218ENST00000546298 HGH1Q9BTY7 390 aa9.09□□□□□ -0.95
YBX3-218ENST00000546298 PITPNM3Q9BZ71 974 aa9.09□□□□□ -0.95
YBX3-218ENST00000546298 SLC7A5P2Q9GIP4 190 aa9.09□□□□□ -0.95
YBX3-218ENST00000546298 RAB6BQ9NRW1 208 aa9.09□□□□□ -0.95
YBX3-218ENST00000546298 ANAPC5Q9UJX4 755 aa9.09□□□□□ -0.95
YBX3-218ENST00000546298 FARSAQ9Y285 508 aaKnown RBP9.09□□□□□ -0.95
YBX3-218ENST00000546298 DRG1Q9Y295 367 aaKnown RBP9.09□□□□□ -0.95
YBX3-218ENST00000546298 MRPS18BQ9Y676 258 aaKnown RBP9.09□□□□□ -0.95
YBX3-218ENST00000546298 KCNMB2Q9Y691 235 aa9.09□□□□□ -0.95
YBX3-218ENST00000546298 ZNF462Q96JM2 2506 aa9.09□□□□□ -0.95
YBX3-218ENST00000546298 ITPR1Q14643 2758 aa9.08□□□□□ -0.96
YBX3-218ENST00000546298 SCN8AQ9UQD0 1980 aa9.08□□□□□ -0.96
YBX3-218ENST00000546298 SDK2Q58EX2 2172 aa9.08□□□□□ -0.96
YBX3-218ENST00000546298 MEN1O00255 615 aa9.08□□□□□ -0.96
YBX3-218ENST00000546298 BTN3A1O00481 513 aa9.08□□□□□ -0.96
YBX3-218ENST00000546298 GOT2P00505 430 aaKnown RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms