RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 SQSTM1Q13501 440 aa16.4■□□□□ 0.22
LTBR-215ENST00000546296 CUL1Q13616 776 aa16.4■□□□□ 0.22
LTBR-215ENST00000546296 TTLL9Q3SXZ7 439 aa16.4■□□□□ 0.22
LTBR-215ENST00000546296 KLHL35Q6PF15 583 aa16.4■□□□□ 0.22
LTBR-215ENST00000546296 STRA8Q7Z7C7 330 aa16.4■□□□□ 0.22
LTBR-215ENST00000546296 B3GNT8Q7Z7M8 397 aa16.4■□□□□ 0.22
LTBR-215ENST00000546296 VRK3Q8IV63 474 aa16.4■□□□□ 0.22
LTBR-215ENST00000546296 ZBTB2Q8N680 514 aa16.4■□□□□ 0.22
LTBR-215ENST00000546296 CDKL2Q92772 493 aa16.4■□□□□ 0.22
LTBR-215ENST00000546296 ATXN7L3BQ96GX2 97 aa16.4■□□□□ 0.22
LTBR-215ENST00000546296 AARSD1Q9BTE6 412 aaKnown RBP16.4■□□□□ 0.22
LTBR-215ENST00000546296 TRIT1Q9H3H1 467 aaKnown RBP16.4■□□□□ 0.22
LTBR-215ENST00000546296 SEMA6CQ9H3T2 930 aa16.4■□□□□ 0.22
LTBR-215ENST00000546296 KIR3DX1Q9H7L2 352 aa16.4■□□□□ 0.22
LTBR-215ENST00000546296 NSMCE4AQ9NXX6 385 aa16.4■□□□□ 0.22
LTBR-215ENST00000546296 SLC24A2Q9UI40 661 aa16.4■□□□□ 0.22
LTBR-215ENST00000546296 TSR3Q9UJK0 312 aaKnown RBP16.4■□□□□ 0.22
LTBR-215ENST00000546296 CDYLQ9Y232 598 aa16.4■□□□□ 0.22
LTBR-215ENST00000546296 ASXL3Q9C0F0 2248 aa16.39■□□□□ 0.22
LTBR-215ENST00000546296 ZFC3H1O60293 1989 aaKnown RBP16.39■□□□□ 0.21
LTBR-215ENST00000546296 VPS26AO75436 327 aa16.39■□□□□ 0.21
LTBR-215ENST00000546296 HOXB3P14651 431 aaPredicted RBP16.39■□□□□ 0.21
LTBR-215ENST00000546296 GABRB3P28472 473 aa16.39■□□□□ 0.21
LTBR-215ENST00000546296 ABCG1P45844 678 aa16.39■□□□□ 0.21
LTBR-215ENST00000546296 SNAP47Q5SQN1 464 aa16.39■□□□□ 0.21
LTBR-215ENST00000546296 TEX35Q5T0J7 233 aa16.39■□□□□ 0.21
LTBR-215ENST00000546296 ARMC6Q6NXE6 501 aa16.39■□□□□ 0.21
LTBR-215ENST00000546296 TMEM71Q6P5X7 295 aa16.39■□□□□ 0.21
LTBR-215ENST00000546296 WDR74Q6RFH5 385 aaPredicted RBP16.39■□□□□ 0.21
LTBR-215ENST00000546296 TMPRSS9Q7Z410 1059 aa16.39■□□□□ 0.21
LTBR-215ENST00000546296 GALNT7Q86SF2 657 aa16.39■□□□□ 0.21
LTBR-215ENST00000546296 PLXDC1Q8IUK5 500 aa16.39■□□□□ 0.21
LTBR-215ENST00000546296 SIDT2Q8NBJ9 832 aaKnown RBP16.39■□□□□ 0.21
LTBR-215ENST00000546296 LRRN4CLQ8ND94 238 aa16.39■□□□□ 0.21
LTBR-215ENST00000546296 ACVR1CQ8NER5 493 aa16.39■□□□□ 0.21
LTBR-215ENST00000546296 OR4D9Q8NGE8 314 aa16.39■□□□□ 0.21
LTBR-215ENST00000546296 OR5AR1Q8NGP9 310 aa16.39■□□□□ 0.21
LTBR-215ENST00000546296 LCN9Q8WX39 176 aa16.39■□□□□ 0.21
LTBR-215ENST00000546296 KCNJ9Q92806 393 aa16.39■□□□□ 0.21
LTBR-215ENST00000546296 INPP5DQ92835 1189 aa16.39■□□□□ 0.21
LTBR-215ENST00000546296 FOPNLQ96NB1 174 aa16.39■□□□□ 0.21
LTBR-215ENST00000546296 FMO2Q99518 471 aa16.39■□□□□ 0.21
LTBR-215ENST00000546296 NDNQ99608 321 aa16.39■□□□□ 0.21
LTBR-215ENST00000546296 HGH1Q9BTY7 390 aa16.39■□□□□ 0.21
LTBR-215ENST00000546296 AKAP7Q9P0M2 348 aaPredicted RBP16.39■□□□□ 0.21
LTBR-215ENST00000546296 TXNDC16Q9P2K2 825 aa16.39■□□□□ 0.21
LTBR-215ENST00000546296 GALPQ9UBC7 116 aa16.39■□□□□ 0.21
LTBR-215ENST00000546296 POLG2Q9UHN1 485 aa16.39■□□□□ 0.21
LTBR-215ENST00000546296 TDRKHQ9Y2W6 561 aaKnown RBP16.39■□□□□ 0.21
LTBR-215ENST00000546296 ENTPD2Q9Y5L3 495 aa16.39■□□□□ 0.21
LTBR-215ENST00000546296 OR6C74A6NCV1 312 aa16.38■□□□□ 0.21
LTBR-215ENST00000546296 TRABD2BA6NFA1 517 aa16.38■□□□□ 0.21
LTBR-215ENST00000546296 AGRPO00253 132 aa16.38■□□□□ 0.21
LTBR-215ENST00000546296 RPN2P04844 631 aa16.38■□□□□ 0.21
LTBR-215ENST00000546296 CSF2RBP32927 897 aa16.38■□□□□ 0.21
LTBR-215ENST00000546296 CLCN7P51798 805 aa16.38■□□□□ 0.21
LTBR-215ENST00000546296 LIMK2P53671 638 aa16.38■□□□□ 0.21
LTBR-215ENST00000546296 GPX6P59796 221 aa16.38■□□□□ 0.21
LTBR-215ENST00000546296 CFHR1Q03591 330 aa16.38■□□□□ 0.21
LTBR-215ENST00000546296 ZFP36L1Q07352 338 aaKnown RBP16.38■□□□□ 0.21
LTBR-215ENST00000546296 UGT3A1Q6NUS8 523 aa16.38■□□□□ 0.21
LTBR-215ENST00000546296 TTC23LQ6PF05 361 aa16.38■□□□□ 0.21
LTBR-215ENST00000546296 FOXR1Q6PIV2 292 aa16.38■□□□□ 0.21
LTBR-215ENST00000546296 ZNF574Q6ZN55 896 aaPredicted RBP16.38■□□□□ 0.21
LTBR-215ENST00000546296 SLC26A11Q86WA9 606 aa16.38■□□□□ 0.21
LTBR-215ENST00000546296 TBC1D21Q8IYX1 336 aa16.38■□□□□ 0.21
LTBR-215ENST00000546296 GPATCH11Q8N954 259 aa16.38■□□□□ 0.21
LTBR-215ENST00000546296 OR4E2Q8NGC2 313 aa16.38■□□□□ 0.21
LTBR-215ENST00000546296 CCDC74BQ96LY2 380 aa16.38■□□□□ 0.21
LTBR-215ENST00000546296 TGM7Q96PF1 710 aa16.38■□□□□ 0.21
LTBR-215ENST00000546296 GPR21Q99679 349 aa16.38■□□□□ 0.21
LTBR-215ENST00000546296 SRMSQ9H3Y6 488 aa16.38■□□□□ 0.21
LTBR-215ENST00000546296 LRRC4CQ9HCJ2 640 aa16.38■□□□□ 0.21
LTBR-215ENST00000546296 LATS2Q9NRM7 1088 aa16.38■□□□□ 0.21
LTBR-215ENST00000546296 TAS2R13Q9NYV9 303 aa16.38■□□□□ 0.21
LTBR-215ENST00000546296 OGFRQ9NZT2 677 aa16.38■□□□□ 0.21
LTBR-215ENST00000546296 TMEM9Q9P0T7 183 aa16.38■□□□□ 0.21
LTBR-215ENST00000546296 KLHL42Q9P2K6 505 aa16.38■□□□□ 0.21
LTBR-215ENST00000546296 KLHL3Q9UH77 587 aa16.38■□□□□ 0.21
LTBR-215ENST00000546296 TRMT6Q9UJA5 497 aaKnown RBP16.38■□□□□ 0.21
LTBR-215ENST00000546296 DHRS7Q9Y394 339 aa16.38■□□□□ 0.21
LTBR-215ENST00000546296 AK5Q9Y6K8 562 aa16.38■□□□□ 0.21
LTBR-215ENST00000546296 CEP295Q9C0D2 2601 aa16.37■□□□□ 0.21
LTBR-215ENST00000546296 RP1P56715 2156 aa16.37■□□□□ 0.21
LTBR-215ENST00000546296 IGHV5-10-1A0A0J9YXX1 117 aa16.37■□□□□ 0.21
LTBR-215ENST00000546296 TCRBV9S1A1TA0A576 114 aa16.37■□□□□ 0.21
LTBR-215ENST00000546296 A8MU76 341 aa16.37■□□□□ 0.21
LTBR-215ENST00000546296 CAPN5O15484 640 aaPredicted RBP16.37■□□□□ 0.21
LTBR-215ENST00000546296 KDM1AO60341 852 aa16.37■□□□□ 0.21
LTBR-215ENST00000546296 SPAG6O75602 509 aa16.37■□□□□ 0.21
LTBR-215ENST00000546296 PIAS1O75925 651 aa16.37■□□□□ 0.21
LTBR-215ENST00000546296 CCKBRP32239 447 aa16.37■□□□□ 0.21
LTBR-215ENST00000546296 STX2P32856 288 aa16.37■□□□□ 0.21
LTBR-215ENST00000546296 SKIV2L2P42285 1042 aaKnown RBP16.37■□□□□ 0.21
LTBR-215ENST00000546296 CAPZBP47756 277 aa16.37■□□□□ 0.21
LTBR-215ENST00000546296 PDX1P52945 283 aa16.37■□□□□ 0.21
LTBR-215ENST00000546296 KYNUQ16719 465 aa16.37■□□□□ 0.21
LTBR-215ENST00000546296 ACSBG2Q5FVE4 666 aa16.37■□□□□ 0.21
LTBR-215ENST00000546296 IRGCQ6NXR0 463 aa16.37■□□□□ 0.21
LTBR-215ENST00000546296 UNC5DQ6UXZ4 953 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms