RNA–Protein interactions for RNA: ENST00000546088.5

TAF1D-222, Transcript of TATA-box binding protein associated factor, RNA polymerase I subunit D, human

TSL 3

Gene TAF1D, Length 1,728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TAF1D-222	ENST00000546088	ITGA9	Q13797	1035 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	GTF2H3	Q13889	308 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	ELOC	Q15369	112 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	SKIDA1	Q1XH10	827 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	PCID2	Q5JVF3	399 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	GUSBP11	Q6P575	273 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	DHRS13	Q6UX07	377 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	C4orf22	Q6V702	233 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	GKN2	Q86XP6	184 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	ZNF547	Q8IVP9	402 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	IGDCC3	Q8IVU1	814 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	SLC35F3	Q8IY50	421 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	CHCHD4	Q8N4Q1	142 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	LILRA3	Q8N6C8	439 aa	Predicted RBP	6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088		Q8N9G6	341 aa	Predicted RBP	6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	KY	Q8NBH2	561 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	NOA1	Q8NC60	698 aa	Known RBP	6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	OR4C6	Q8NH72	309 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	KIF18A	Q8NI77	898 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	ZNF669	Q96BR6	464 aa	Predicted RBP	6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	CFAP36	Q96G28	342 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	CARD6	Q9BX69	1037 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	CDH19	Q9H159	772 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	PRDM8	Q9NQV8	689 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	TAAR2	Q9P1P5	351 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	RNF14	Q9UBS8	474 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	APPL1	Q9UKG1	709 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	PSMD13	Q9UNM6	376 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	CHMP2B	Q9UQN3	213 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	MRFAP1	Q9Y605	127 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	CFAP20	Q9Y6A4	193 aa	Known RBP	6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	PRSS21	Q9Y6M0	314 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	DGKB	Q9Y6T7	804 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	SPTBN2	O15020	2390 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	GOLGA4	Q13439	2230 aa	Known RBP	6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	LY6G6E	A0A0G2JKS1	128 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	TMEM238L	A0A1B0GVL6	79 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	MED19	A0JLT2	244 aa	Predicted RBP	6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	IQCF5	A8MTL0	148 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	LMO7DN	F2Z398	122 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	TOR1B	O14657	336 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	TNFRSF10C	O14798	259 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	YKT6	O15498	198 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	POP7	O75817	140 aa	Known RBP	6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	PIAS1	O75925	651 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	PYGL	P06737	847 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	POLB	P06746	335 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	IVL	P07476	585 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	HOXC4	P09017	264 aa	Predicted RBP	6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	FTH1P19	P0C7X4	201 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	ALPPL2	P10696	532 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	CEACAM1	P13688	526 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	FOXN2	P32314	431 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	DEK	P35659	375 aa	Known RBP	6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	NPY2R	P49146	381 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	SARNP	P82979	210 aa	Known RBP	6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	PDE1B	Q01064	536 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	CKAP4	Q07065	602 aa	Known RBP	6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	ILF3	Q12906	894 aa	Known RBP eCLIP	6.33	□□□□□ -1.4	1e-6	■■□□□ 12.1
TAF1D-222	ENST00000546088	DHX34	Q14147	1143 aa	Known RBP	6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	NFE2L1	Q14494	772 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	FASTKD3	Q14CZ7	662 aa	Known RBP	6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	FASTKD1	Q53R41	847 aa	Known RBP	6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	C8orf74	Q6P047	294 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	EFL1	Q7Z2Z2	1120 aa	Known RBP	6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	SNX20	Q7Z614	316 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	LRRTM4	Q86VH4	590 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	NXPE1	Q8N323	547 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	OR4L1	Q8NH43	312 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	ABHD4	Q8TB40	342 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	IFI44	Q8TCB0	444 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	JPH3	Q8WXH2	748 aa	Predicted RBP	6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	SLCO2A1	Q92959	643 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	DCUN1D1	Q96GG9	259 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	SNF8	Q96H20	258 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	SIGLEC10	Q96LC7	697 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	VPS35	Q96QK1	796 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	GSDMC	Q9BYG8	508 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	IL22	Q9GZX6	179 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	ZCCHC4	Q9H5U6	513 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	NLGN3	Q9NZ94	848 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	SAMD15	Q9P1V8	674 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	SLC17A6	Q9P2U8	582 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	TBC1D29	Q9UFV1	150 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	ANAPC5	Q9UJX4	755 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	PCDHGB2	Q9Y5G2	931 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	RPS6KL1	Q9Y6S9	549 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088		U3KQA8	63 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	ASPM	Q8IZT6	3477 aa		6.33	□□□□□ -1.4
TAF1D-222	ENST00000546088	CNOT1	A5YKK6	2376 aa	Known RBP	6.32	□□□□□ -1.4
TAF1D-222	ENST00000546088	UBA6	A0AVT1	1052 aa	Predicted RBP	6.32	□□□□□ -1.4
TAF1D-222	ENST00000546088	SDR42E2	A6NKP2	422 aa		6.32	□□□□□ -1.4
TAF1D-222	ENST00000546088	OR52A4P	A6NMU1	304 aa		6.32	□□□□□ -1.4
TAF1D-222	ENST00000546088	PDZK1P1	A8MUH7	402 aa		6.32	□□□□□ -1.4
TAF1D-222	ENST00000546088	TP73	O15350	636 aa		6.32	□□□□□ -1.4
TAF1D-222	ENST00000546088	CD3EAP	O15446	510 aa	Known RBP	6.32	□□□□□ -1.4
TAF1D-222	ENST00000546088	TNFSF14	O43557	240 aa		6.32	□□□□□ -1.4
TAF1D-222	ENST00000546088	PPFIA2	O75334	1257 aa		6.32	□□□□□ -1.4
TAF1D-222	ENST00000546088	SEC31A	O94979	1220 aa	Known RBP	6.32	□□□□□ -1.4

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms