RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 TNFRSF12AQ9NP84 129 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 FBXO8Q9NRD0 319 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 SMPD4Q9NXE4 827 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 UXTQ9UBK9 157 aaPredicted RBP6.37□□□□□ -1.39
SNHG1-225ENST00000545920 TRMT6Q9UJA5 497 aaKnown RBP6.37□□□□□ -1.39
SNHG1-225ENST00000545920 ENPP5Q9UJA9 477 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 PPT2Q9UMR5 302 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 CDC14AQ9UNH5 594 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 FZD1Q9UP38 647 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 MAPRE3Q9UPY8 281 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 PDE10AQ9Y233 779 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 EIF3LQ9Y262 564 aaKnown RBP6.37□□□□□ -1.39
SNHG1-225ENST00000545920 TMED5Q9Y3A6 229 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 TPRKBQ9Y3C4 175 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 FIS1Q9Y3D6 152 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 PCDHB5Q9Y5E4 795 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 PCDHB1Q9Y5F3 818 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 OTOFQ9HC10 1997 aa6.37□□□□□ -1.39
SNHG1-225ENST00000545920 MYOCOSA0A1B0GUC4 107 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 A0A1W2PPW3 197 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 FAM221BA6H8Z2 402 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 ARL5CA6NH57 179 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 SAGE2PA6NJ88 616 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 FAM220BPB1ANY3 271 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 ADM5C9JUS6 153 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 NPIPB8E9PQR5 432 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 G3V2T6 193 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 EIF3FO00303 357 aaPredicted RBP6.36□□□□□ -1.39
SNHG1-225ENST00000545920 PDHXO00330 501 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 AURKAO14965 403 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 SMAD7O15105 426 aaKnown RBP6.36□□□□□ -1.39
SNHG1-225ENST00000545920 RGS14O43566 566 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 SYNCRIPO60506 623 aaKnown RBP6.36□□□□□ -1.39
SNHG1-225ENST00000545920 PEX10O60683 326 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 ERN1O75460 977 aaKnown RBP6.36□□□□□ -1.39
SNHG1-225ENST00000545920 ECI2O75521 394 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 SERPINB7O75635 380 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 GABARAPO95166 117 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 OAZ2O95190 189 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 C1RP00736 705 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 IGLV3-27P01718 113 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 S100BP04271 92 aaPredicted RBP6.36□□□□□ -1.39
SNHG1-225ENST00000545920 GNAO1P09471 354 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 PKMP14618 531 aaKnown RBP6.36□□□□□ -1.39
SNHG1-225ENST00000545920 HDCP19113 662 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 RPS3P23396 243 aaKnown RBP eCLIP6.36□□□□□ -1.39
SNHG1-225ENST00000545920 EEF1B2P24534 225 aaKnown RBP6.36□□□□□ -1.39
SNHG1-225ENST00000545920 OXTRP30559 389 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 PTGER3P43115 390 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 CHRNA4P43681 627 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 STT3AP46977 705 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 ZFP36L2P47974 494 aaKnown RBP6.36□□□□□ -1.39
SNHG1-225ENST00000545920 NRIP1P48552 1158 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 CLCNKBP51801 687 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 BMXP51813 675 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 ZNF140P52738 457 aaPredicted RBP6.36□□□□□ -1.39
SNHG1-225ENST00000545920 RPS3AP61247 264 aaKnown RBP6.36□□□□□ -1.39
SNHG1-225ENST00000545920 TUBA1BP68363 451 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 NKX3-2P78367 333 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 TIAL1Q01085 375 aaKnown RBP eCLIP6.36□□□□□ -1.39
SNHG1-225ENST00000545920 TEKQ02763 1124 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 ITKQ08881 620 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 TMEM62Q0P6H9 643 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 ABRQ12979 859 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 FADDQ13158 208 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 KEAP1Q14145 624 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 GRB7Q14451 532 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 NR1D2Q14995 579 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 POLD3Q15054 466 aaPredicted RBP6.36□□□□□ -1.39
SNHG1-225ENST00000545920 OXA1LQ15070 435 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 OR4D1Q15615 310 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 SMAD1Q15797 465 aaKnown RBP6.36□□□□□ -1.39
SNHG1-225ENST00000545920 DGUOKQ16854 277 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 TRIM16LQ309B1 348 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 ZNF789Q5FWF6 425 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 C6orf136Q5SQH8 315 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 LYPLAL1Q5VWZ2 237 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 DUS1LQ6P1R4 473 aaKnown RBP6.36□□□□□ -1.39
SNHG1-225ENST00000545920 ZNF549Q6P9A3 640 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 DLEU7Q6UYE1 221 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 ZNF783Q6ZMS7 281 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 TMEM26Q6ZUK4 368 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 TUBA1AQ71U36 451 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 VN1R5Q7Z5H4 357 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 NECAB2Q7Z6G3 386 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 SCD5Q86SK9 330 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 GPSM1Q86YR5 675 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 KIAA2013Q8IYS2 634 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 CLEC4FQ8N1N0 589 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 CENPSQ8N2Z9 138 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 ZCCHC7Q8N3Z6 543 aaKnown RBP6.36□□□□□ -1.39
SNHG1-225ENST00000545920 SPATA6LQ8N4H0 392 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 FAM169BQ8N8A8 192 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 NETO2Q8NC67 525 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 OR52K2Q8NGK3 314 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 MAGEE2Q8TD90 523 aaPredicted RBP6.36□□□□□ -1.39
SNHG1-225ENST00000545920 PHF10Q8WUB8 498 aaKnown RBP6.36□□□□□ -1.39
SNHG1-225ENST00000545920 UBTD2Q8WUN7 234 aa6.36□□□□□ -1.39
SNHG1-225ENST00000545920 IPCEF1Q8WWN9 437 aaPredicted RBP6.36□□□□□ -1.39
SNHG1-225ENST00000545920 FCGR1BQ92637 280 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms