RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 RARS2Q5T160 578 aaKnown RBP4.14□□□□□ -1.75
SNHG1-224ENST00000545688 GAGE2AQ6NT46 116 aa4.14□□□□□ -1.75
SNHG1-224ENST00000545688 CLEC17AQ6ZS10 378 aa4.14□□□□□ -1.75
SNHG1-224ENST00000545688 SLC16A9Q7RTY1 509 aa4.14□□□□□ -1.75
SNHG1-224ENST00000545688 PXKQ7Z7A4 578 aa4.14□□□□□ -1.75
SNHG1-224ENST00000545688 NGEFQ8N5V2 710 aa4.14□□□□□ -1.75
SNHG1-224ENST00000545688 PDILTQ8N807 584 aa4.14□□□□□ -1.75
SNHG1-224ENST00000545688 ZNF383Q8NA42 475 aa4.14□□□□□ -1.75
SNHG1-224ENST00000545688 MRGPRDQ8TDS7 321 aa4.14□□□□□ -1.75
SNHG1-224ENST00000545688 DDOQ99489 341 aa4.14□□□□□ -1.75
SNHG1-224ENST00000545688 SYT11Q9BT88 431 aa4.14□□□□□ -1.75
SNHG1-224ENST00000545688 SMC4Q9NTJ3 1288 aa4.14□□□□□ -1.75
SNHG1-224ENST00000545688 GAGE2DQ9UEU5 116 aa4.14□□□□□ -1.75
SNHG1-224ENST00000545688 CPS1P31327 1500 aa4.14□□□□□ -1.75
SNHG1-224ENST00000545688 DIP2CQ9Y2E4 1556 aa4.14□□□□□ -1.75
SNHG1-224ENST00000545688 PTPRKQ15262 1439 aa4.13□□□□□ -1.75
SNHG1-224ENST00000545688 CTTNBP2Q8WZ74 1663 aa4.13□□□□□ -1.75
SNHG1-224ENST00000545688 SHANK2Q9UPX8 1470 aa4.13□□□□□ -1.75
SNHG1-224ENST00000545688 IGHV4-4A0A075B6R2 117 aa4.13□□□□□ -1.75
SNHG1-224ENST00000545688 A0A087WW49 117 aa4.13□□□□□ -1.75
SNHG1-224ENST00000545688 DCXO43602 365 aa4.13□□□□□ -1.75
SNHG1-224ENST00000545688 TYMPP19971 482 aa4.13□□□□□ -1.75
SNHG1-224ENST00000545688 PSMA4P25789 261 aaKnown RBP4.13□□□□□ -1.75
SNHG1-224ENST00000545688 HOXC13P31276 330 aa4.13□□□□□ -1.75
SNHG1-224ENST00000545688 IRX6P78412 446 aaPredicted RBP4.13□□□□□ -1.75
SNHG1-224ENST00000545688 G3BP1Q13283 466 aaKnown RBP eCLIP4.13□□□□□ -1.75
SNHG1-224ENST00000545688 ASTE1Q2TB18 679 aaPredicted RBP4.13□□□□□ -1.75
SNHG1-224ENST00000545688 FAM109BQ6ICB4 259 aaPredicted RBP4.13□□□□□ -1.75
SNHG1-224ENST00000545688 JADE1Q6IE81 842 aa4.13□□□□□ -1.75
SNHG1-224ENST00000545688 Q6ZSR9 355 aa4.13□□□□□ -1.75
SNHG1-224ENST00000545688 TMTC3Q6ZXV5 915 aa4.13□□□□□ -1.75
SNHG1-224ENST00000545688 GRHL3Q8TE85 626 aa4.13□□□□□ -1.75
SNHG1-224ENST00000545688 DAZLQ92904 295 aaKnown RBP4.13□□□□□ -1.75
SNHG1-224ENST00000545688 C18orf12Q96KH6 178 aa4.13□□□□□ -1.75
SNHG1-224ENST00000545688 SLC22A12Q96S37 553 aa4.13□□□□□ -1.75
SNHG1-224ENST00000545688 IWS1Q96ST2 819 aa4.13□□□□□ -1.75
SNHG1-224ENST00000545688 RBM4BQ9BQ04 359 aaKnown RBP4.13□□□□□ -1.75
SNHG1-224ENST00000545688 PLK3Q9H4B4 646 aa4.13□□□□□ -1.75
SNHG1-224ENST00000545688 AP2A2O94973 939 aa4.12□□□□□ -1.75
SNHG1-224ENST00000545688 RAF1P04049 648 aa4.12□□□□□ -1.75
SNHG1-224ENST00000545688 EDN1P05305 212 aa4.12□□□□□ -1.75
SNHG1-224ENST00000545688 CEBPBP17676 345 aa4.12□□□□□ -1.75
SNHG1-224ENST00000545688 SLC6A12P48065 614 aa4.12□□□□□ -1.75
SNHG1-224ENST00000545688 ADALQ6DHV7 355 aa4.12□□□□□ -1.75
SNHG1-224ENST00000545688 CORO6Q6QEF8 472 aa4.12□□□□□ -1.75
SNHG1-224ENST00000545688 GALNT5Q7Z7M9 940 aa4.12□□□□□ -1.75
SNHG1-224ENST00000545688 ZNF614Q8N883 585 aa4.12□□□□□ -1.75
SNHG1-224ENST00000545688 TDRD7Q8NHU6 1098 aaKnown RBP4.12□□□□□ -1.75
SNHG1-224ENST00000545688 OLIG1Q8TAK6 271 aa4.12□□□□□ -1.75
SNHG1-224ENST00000545688 SLC26A6Q9BXS9 759 aa4.12□□□□□ -1.75
SNHG1-224ENST00000545688 PAG1Q9NWQ8 432 aa4.12□□□□□ -1.75
SNHG1-224ENST00000545688 ASIC3Q9UHC3 531 aa4.12□□□□□ -1.75
SNHG1-224ENST00000545688 CORO1CQ9ULV4 474 aaPredicted RBP4.12□□□□□ -1.75
SNHG1-224ENST00000545688 SPIN1Q9Y657 262 aaPredicted RBP4.12□□□□□ -1.75
SNHG1-224ENST00000545688 MED14O60244 1454 aa4.11□□□□□ -1.75
SNHG1-224ENST00000545688 VWDEQ8N2E2 1590 aa4.11□□□□□ -1.75
SNHG1-224ENST00000545688 NEURL4Q96JN8 1562 aa4.11□□□□□ -1.75
SNHG1-224ENST00000545688 ZNF142P52746 1687 aaPredicted RBP4.11□□□□□ -1.75
SNHG1-224ENST00000545688 A8MZ25 164 aa4.11□□□□□ -1.75
SNHG1-224ENST00000545688 PRR32B1ATL7 298 aa4.11□□□□□ -1.75
SNHG1-224ENST00000545688 HS6ST1O60243 411 aa4.11□□□□□ -1.75
SNHG1-224ENST00000545688 TBX18O95935 607 aa4.11□□□□□ -1.75
SNHG1-224ENST00000545688 GH2P01242 217 aa4.11□□□□□ -1.75
SNHG1-224ENST00000545688 SRPRAP08240 638 aaKnown RBP4.11□□□□□ -1.75
SNHG1-224ENST00000545688 RARGP13631 454 aa4.11□□□□□ -1.75
SNHG1-224ENST00000545688 NMBRP28336 390 aa4.11□□□□□ -1.75
SNHG1-224ENST00000545688 KRT9P35527 623 aa4.11□□□□□ -1.75
SNHG1-224ENST00000545688 NKX2-1P43699 371 aaPredicted RBP4.11□□□□□ -1.75
SNHG1-224ENST00000545688 NOVP48745 357 aa4.11□□□□□ -1.75
SNHG1-224ENST00000545688 CAMPP49913 170 aa4.11□□□□□ -1.75
SNHG1-224ENST00000545688 LGALS3BPQ08380 585 aa4.11□□□□□ -1.75
SNHG1-224ENST00000545688 GPR17Q13304 367 aa4.11□□□□□ -1.75
SNHG1-224ENST00000545688 RRS1Q15050 365 aaKnown RBP4.11□□□□□ -1.75
SNHG1-224ENST00000545688 GCNT6Q5T4J0 391 aa4.11□□□□□ -1.75
SNHG1-224ENST00000545688 CYP4A22Q5TCH4 519 aa4.11□□□□□ -1.75
SNHG1-224ENST00000545688 ZNF613Q6PF04 617 aa4.11□□□□□ -1.75
SNHG1-224ENST00000545688 SARM1Q6SZW1 724 aa4.11□□□□□ -1.75
SNHG1-224ENST00000545688 METTL7BQ6UX53 244 aa4.11□□□□□ -1.75
SNHG1-224ENST00000545688 SMC5Q8IY18 1101 aa4.11□□□□□ -1.75
SNHG1-224ENST00000545688 TMTC2Q8N394 836 aa4.11□□□□□ -1.75
SNHG1-224ENST00000545688 ANKRD52Q8NB46 1076 aa4.11□□□□□ -1.75
SNHG1-224ENST00000545688 TMEM178AQ8NBL3 297 aa4.11□□□□□ -1.75
SNHG1-224ENST00000545688 NAXEQ8NCW5 288 aa4.11□□□□□ -1.75
SNHG1-224ENST00000545688 FAM222BQ8WU58 562 aa4.11□□□□□ -1.75
SNHG1-224ENST00000545688 POMGNT1Q8WZA1 660 aa4.11□□□□□ -1.75
SNHG1-224ENST00000545688 C7orf26Q96N11 449 aa4.11□□□□□ -1.75
SNHG1-224ENST00000545688 MYADMQ96S97 322 aa4.11□□□□□ -1.75
SNHG1-224ENST00000545688 NCAPGQ9BPX3 1015 aa4.11□□□□□ -1.75
SNHG1-224ENST00000545688 TRIM51Q9BSJ1 452 aa4.11□□□□□ -1.75
SNHG1-224ENST00000545688 MUC13Q9H3R2 512 aa4.11□□□□□ -1.75
SNHG1-224ENST00000545688 DNAJC18Q9H819 358 aa4.11□□□□□ -1.75
SNHG1-224ENST00000545688 DIAPH3Q9NSV4 1193 aa4.11□□□□□ -1.75
SNHG1-224ENST00000545688 PNMA2Q9UL42 364 aa4.11□□□□□ -1.75
SNHG1-224ENST00000545688 CMAHPQ9Y471 501 aa4.11□□□□□ -1.75
SNHG1-224ENST00000545688 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.11□□□□□ -1.75
SNHG1-224ENST00000545688 CEP170BQ9Y4F5 1589 aaPredicted RBP4.1□□□□□ -1.75
SNHG1-224ENST00000545688 ABCA6Q8N139 1617 aa4.1□□□□□ -1.75
SNHG1-224ENST00000545688 MROH2AA6NES4 1674 aa4.1□□□□□ -1.75
SNHG1-224ENST00000545688 RNASEH2AO75792 299 aaKnown RBP4.1□□□□□ -1.75
SNHG1-224ENST00000545688 SNX16P57768 344 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms