RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 RIMKLBQ9ULI2 386 aa7.23□□□□□ -1.25
CPSF7-224ENST00000544990 TTC7AQ9ULT0 858 aaPredicted RBP7.23□□□□□ -1.25
CPSF7-224ENST00000544990 RAXQ9Y2V3 346 aa7.23□□□□□ -1.25
CPSF7-224ENST00000544990 PIKFYVEQ9Y2I7 2098 aa7.23□□□□□ -1.25
CPSF7-224ENST00000544990 USP24Q9UPU5 2620 aa7.22□□□□□ -1.25
CPSF7-224ENST00000544990 ACACAQ13085 2346 aa7.22□□□□□ -1.25
CPSF7-224ENST00000544990 A0A087WV48 116 aa7.22□□□□□ -1.25
CPSF7-224ENST00000544990 TRBV5-4A0A0C4DH59 114 aa7.22□□□□□ -1.25
CPSF7-224ENST00000544990 C17orf113A0A1B0GUU1 675 aa7.22□□□□□ -1.25
CPSF7-224ENST00000544990 MROH6A6NGR9 719 aa7.22□□□□□ -1.25
CPSF7-224ENST00000544990 LILRA5A6NI73 299 aa7.22□□□□□ -1.25
CPSF7-224ENST00000544990 PRR19A6NJB7 356 aa7.22□□□□□ -1.25
CPSF7-224ENST00000544990 F8W8V4 182 aa7.22□□□□□ -1.25
CPSF7-224ENST00000544990 QSOX1O00391 747 aa7.22□□□□□ -1.25
CPSF7-224ENST00000544990 CCL22O00626 93 aa7.22□□□□□ -1.25
CPSF7-224ENST00000544990 CES2O00748 559 aa7.22□□□□□ -1.25
CPSF7-224ENST00000544990 HGSO14964 777 aaPredicted RBP7.22□□□□□ -1.25
CPSF7-224ENST00000544990 TLX3O43711 291 aaPredicted RBP7.22□□□□□ -1.25
CPSF7-224ENST00000544990 TNFSF15O95150 251 aa7.22□□□□□ -1.25
CPSF7-224ENST00000544990 KRT14P02533 472 aa7.22□□□□□ -1.25
CPSF7-224ENST00000544990 ITGA2BP08514 1039 aa7.22□□□□□ -1.25
CPSF7-224ENST00000544990 AMD1P17707 334 aa7.22□□□□□ -1.25
CPSF7-224ENST00000544990 TCP1P17987 556 aaKnown RBP7.22□□□□□ -1.25
CPSF7-224ENST00000544990 PSMA3P25788 255 aa7.22□□□□□ -1.25
CPSF7-224ENST00000544990 ACRV1P26436 265 aa7.22□□□□□ -1.25
CPSF7-224ENST00000544990 PBLDP30039 288 aaPredicted RBP7.22□□□□□ -1.25
CPSF7-224ENST00000544990 CSTF2P33240 577 aaKnown RBP eCLIP7.22□□□□□ -1.25
CPSF7-224ENST00000544990 CA5AP35218 305 aa7.22□□□□□ -1.25
CPSF7-224ENST00000544990 EIF2S3P41091 472 aaKnown RBP7.22□□□□□ -1.25
CPSF7-224ENST00000544990 NSG1P42857 185 aa7.22□□□□□ -1.25
CPSF7-224ENST00000544990 MAPK9P45984 424 aa7.22□□□□□ -1.25
CPSF7-224ENST00000544990 NPY2RP49146 381 aa7.22□□□□□ -1.25
CPSF7-224ENST00000544990 LIMK2P53671 638 aa7.22□□□□□ -1.25
CPSF7-224ENST00000544990 DRG2P55039 364 aaKnown RBP7.22□□□□□ -1.25
CPSF7-224ENST00000544990 UBE2IP63279 158 aaKnown RBP7.22□□□□□ -1.25
CPSF7-224ENST00000544990 PRAMEP78395 509 aa7.22□□□□□ -1.25
CPSF7-224ENST00000544990 COL9A2Q14055 689 aaPredicted RBP7.22□□□□□ -1.25
CPSF7-224ENST00000544990 ITIH4Q14624 930 aa7.22□□□□□ -1.25
CPSF7-224ENST00000544990 BCL7AQ4VC05 210 aa7.22□□□□□ -1.25
CPSF7-224ENST00000544990 CCDC38Q502W7 563 aa7.22□□□□□ -1.25
CPSF7-224ENST00000544990 PCID2Q5JVF3 399 aa7.22□□□□□ -1.25
CPSF7-224ENST00000544990 TSTD2Q5T7W7 516 aa7.22□□□□□ -1.25
CPSF7-224ENST00000544990 LYPLAL1Q5VWZ2 237 aa7.22□□□□□ -1.25
CPSF7-224ENST00000544990 NKAIN2Q5VXU1 208 aa7.22□□□□□ -1.25
CPSF7-224ENST00000544990 METRNLQ641Q3 311 aa7.22□□□□□ -1.25
CPSF7-224ENST00000544990 WDR74Q6RFH5 385 aaPredicted RBP7.22□□□□□ -1.25
CPSF7-224ENST00000544990 TMEM26Q6ZUK4 368 aa7.22□□□□□ -1.25
CPSF7-224ENST00000544990 SERPINA9Q86WD7 417 aa7.22□□□□□ -1.25
CPSF7-224ENST00000544990 ZNF761Q86XN6 746 aaPredicted RBP7.22□□□□□ -1.25
CPSF7-224ENST00000544990 PLXDC1Q8IUK5 500 aa7.22□□□□□ -1.25
CPSF7-224ENST00000544990 SLITRK4Q8IW52 837 aa7.22□□□□□ -1.25
CPSF7-224ENST00000544990 GLIS1Q8NBF1 620 aa7.22□□□□□ -1.25
CPSF7-224ENST00000544990 ZNF248Q8NDW4 579 aa7.22□□□□□ -1.25
CPSF7-224ENST00000544990 PPHLN1Q8NEY8 458 aaKnown RBP7.22□□□□□ -1.25
CPSF7-224ENST00000544990 OR2L2Q8NH16 312 aa7.22□□□□□ -1.25
CPSF7-224ENST00000544990 ACTRT1Q8TDG2 376 aa7.22□□□□□ -1.25
CPSF7-224ENST00000544990 GRK7Q8WTQ7 553 aa7.22□□□□□ -1.25
CPSF7-224ENST00000544990 NCSTNQ92542 709 aa7.22□□□□□ -1.25
CPSF7-224ENST00000544990 NKD1Q969G9 470 aa7.22□□□□□ -1.25
CPSF7-224ENST00000544990 ZNF775Q96BV0 537 aaPredicted RBP7.22□□□□□ -1.25
CPSF7-224ENST00000544990 SEC16BQ96JE7 1060 aa7.22□□□□□ -1.25
CPSF7-224ENST00000544990 LINC00615Q96LM1 132 aaPredicted RBP7.22□□□□□ -1.25
CPSF7-224ENST00000544990 NUDT22Q9BRQ3 303 aa7.22□□□□□ -1.25
CPSF7-224ENST00000544990 CCM2Q9BSQ5 444 aa7.22□□□□□ -1.25
CPSF7-224ENST00000544990 AP1M1Q9BXS5 423 aa7.22□□□□□ -1.25
CPSF7-224ENST00000544990 SEMA6CQ9H3T2 930 aa7.22□□□□□ -1.25
CPSF7-224ENST00000544990 CASS4Q9NQ75 786 aa7.22□□□□□ -1.25
CPSF7-224ENST00000544990 ZNF624Q9P2J8 865 aaPredicted RBP7.22□□□□□ -1.25
CPSF7-224ENST00000544990 ANAPC5Q9UJX4 755 aa7.22□□□□□ -1.25
CPSF7-224ENST00000544990 LOXL2Q9Y4K0 774 aa7.22□□□□□ -1.25
CPSF7-224ENST00000544990 CEP295Q9C0D2 2601 aa7.22□□□□□ -1.25
CPSF7-224ENST00000544990 AKAP13Q12802 2813 aa7.21□□□□□ -1.25
CPSF7-224ENST00000544990 IGLV3-16A0A075B6K0 115 aa7.21□□□□□ -1.26
CPSF7-224ENST00000544990 IGHV5-10-1A0A0J9YXX1 117 aa7.21□□□□□ -1.26
CPSF7-224ENST00000544990 CCDC78A2IDD5 438 aa7.21□□□□□ -1.26
CPSF7-224ENST00000544990 CCDC162PA2VCL2 907 aa7.21□□□□□ -1.26
CPSF7-224ENST00000544990 OR52A4PA6NMU1 304 aa7.21□□□□□ -1.26
CPSF7-224ENST00000544990 CDRT15L2A8MXV6 281 aa7.21□□□□□ -1.26
CPSF7-224ENST00000544990 NVLO15381 856 aaKnown RBP7.21□□□□□ -1.26
CPSF7-224ENST00000544990 UBXN7O94888 489 aa7.21□□□□□ -1.26
CPSF7-224ENST00000544990 AP2A2O94973 939 aa7.21□□□□□ -1.26
CPSF7-224ENST00000544990 GSTM1P09488 218 aa7.21□□□□□ -1.26
CPSF7-224ENST00000544990 SLC35G4P0C7Q5 338 aa7.21□□□□□ -1.26
CPSF7-224ENST00000544990 BRAFP15056 766 aa7.21□□□□□ -1.26
CPSF7-224ENST00000544990 TPSB2P20231 275 aa7.21□□□□□ -1.26
CPSF7-224ENST00000544990 COILP38432 576 aaPredicted RBP7.21□□□□□ -1.26
CPSF7-224ENST00000544990 GRIA1P42261 906 aa7.21□□□□□ -1.26
CPSF7-224ENST00000544990 ABCG1P45844 678 aa7.21□□□□□ -1.26
CPSF7-224ENST00000544990 PRLHRP49683 370 aa7.21□□□□□ -1.26
CPSF7-224ENST00000544990 CDKN1CP49918 316 aaPredicted RBP7.21□□□□□ -1.26
CPSF7-224ENST00000544990 MAPK10P53779 464 aa7.21□□□□□ -1.26
CPSF7-224ENST00000544990 SESN2P58004 480 aaPredicted RBP7.21□□□□□ -1.26
CPSF7-224ENST00000544990 GNG11P61952 73 aa7.21□□□□□ -1.26
CPSF7-224ENST00000544990 GPS1Q13098 491 aa7.21□□□□□ -1.26
CPSF7-224ENST00000544990 NFE2L1Q14494 772 aa7.21□□□□□ -1.26
CPSF7-224ENST00000544990 KRT33BQ14525 404 aa7.21□□□□□ -1.26
CPSF7-224ENST00000544990 CLCA4Q14CN2 919 aa7.21□□□□□ -1.26
CPSF7-224ENST00000544990 TRIP13Q15645 432 aaPredicted RBP7.21□□□□□ -1.26
CPSF7-224ENST00000544990 TPSAB1Q15661 275 aa7.21□□□□□ -1.26
CPSF7-224ENST00000544990 CYP1B1Q16678 543 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms