RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 NTNG1Q9Y2I2 539 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 PADI2Q9Y2J8 665 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 ACTL7AQ9Y615 435 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 DNHD1Q96M86 4753 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 CSMD2Q7Z408 3487 aa4.01□□□□□ -1.77
SNHG1-220ENST00000544550 F8P00451 2351 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 RP1P56715 2156 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 MED13Q9UHV7 2174 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 LRBAP50851 2863 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 TRGV8A0A0C4DH27 118 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 A0A1W2PQ67 120 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 TCRBV5S2A0A599 114 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 GOLGA6CA6NDK9 693 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 GOLGA6BA6NDN3 693 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 PSMD11O00231 422 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 PEX12O00623 359 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 PMM2O15305 246 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 P4HA2O15460 535 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 JRKO75564 520 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 SCRG1O75711 98 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 GRAP2O75791 330 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 LETM1O95202 739 aaPredicted RBP4□□□□□ -1.77
SNHG1-220ENST00000544550 PIGNO95427 931 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 YEATS4O95619 227 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 JCHAINP01591 159 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 CD63P08962 238 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 GOLGA6DP0CG33 693 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 F3P13726 295 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 JUNBP17275 347 aaPredicted RBP4□□□□□ -1.77
SNHG1-220ENST00000544550 NELFEP18615 380 aaKnown RBP4□□□□□ -1.77
SNHG1-220ENST00000544550 KLK2P20151 261 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 PBX1P40424 430 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 HADHAP40939 763 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 CAPZBP47756 277 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 CSNK1DP48730 415 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 GFERP55789 205 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 YBEYP58557 167 aaPredicted RBP4□□□□□ -1.77
SNHG1-220ENST00000544550 KRTAP10-9P60411 292 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 TMPRSS15P98073 1019 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 SLC6A3Q01959 620 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 RBPJQ06330 500 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 BCL2L1Q07817 233 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 LRMPQ12912 555 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 CDC16Q13042 620 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 RAPSNQ13702 412 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 ZNF169Q14929 603 aaPredicted RBP4□□□□□ -1.77
SNHG1-220ENST00000544550 LLGL1Q15334 1064 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 SLC25A52Q3SY17 297 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 ATP13A4Q4VNC1 1196 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 PYCR3Q53H96 274 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 CACHD1Q5VU97 1274 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 IRAK1BP1Q5VVH5 260 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 PWWP2BQ6NUJ5 590 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 RWDD4Q6NW29 188 aaKnown RBP4□□□□□ -1.77
SNHG1-220ENST00000544550 DENND1BQ6P3S1 775 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 FAM199XQ6PEV8 388 aaPredicted RBP4□□□□□ -1.77
SNHG1-220ENST00000544550 OLFML1Q6UWY5 402 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 ZNF517Q6ZMY9 492 aaPredicted RBP4□□□□□ -1.77
SNHG1-220ENST00000544550 FAM183BPQ6ZVS7 135 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 CXXC5Q7LFL8 322 aaKnown RBP4□□□□□ -1.77
SNHG1-220ENST00000544550 PNPLA5Q7Z6Z6 429 aaPredicted RBP4□□□□□ -1.77
SNHG1-220ENST00000544550 BIVMQ86UB2 503 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 NLRP14Q86W24 1093 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 KMT5CQ86Y97 462 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 TMEM126BQ8IUX1 230 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 PHYKPLQ8IUZ5 450 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 TRIM48Q8IWZ4 208 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 RBM12BQ8IXT5 1001 aaKnown RBP4□□□□□ -1.77
SNHG1-220ENST00000544550 GALNT16Q8N428 558 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 ENDOVQ8N8Q3 282 aaKnown RBP4□□□□□ -1.77
SNHG1-220ENST00000544550 SIDT2Q8NBJ9 832 aaKnown RBP4□□□□□ -1.77
SNHG1-220ENST00000544550 LINC00301Q8NCQ3 95 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 ANKRD20A12PQ8NF67 263 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 ZNF606Q8WXB4 792 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 INPP5DQ92835 1189 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 NT5C3BQ969T7 300 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 MTFMTQ96DP5 389 aaKnown RBP4□□□□□ -1.77
SNHG1-220ENST00000544550 TSPAN17Q96FV3 270 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 INTS4Q96HW7 963 aaKnown RBP4□□□□□ -1.77
SNHG1-220ENST00000544550 SCYL1Q96KG9 808 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 FAM81BQ96LP2 452 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 COQ10AQ96MF6 247 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 ZNF396Q96N95 335 aaPredicted RBP4□□□□□ -1.77
SNHG1-220ENST00000544550 USP28Q96RU2 1077 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 RUFY1Q96T51 708 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 FOXC2Q99958 501 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 SLX1AQ9BQ83 275 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 C17orf62Q9BQA9 187 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 TBC1D10AQ9BXI6 508 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 RAB33BQ9H082 229 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 CXXC4Q9H2H0 198 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 ZNF552Q9H707 407 aaPredicted RBP4□□□□□ -1.77
SNHG1-220ENST00000544550 SYNCQ9H7C4 482 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 RMI1Q9H9A7 625 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 UPF2Q9HAU5 1272 aaKnown RBP4□□□□□ -1.77
SNHG1-220ENST00000544550 FANCEQ9HB96 536 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 FGF21Q9NSA1 209 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 POT1Q9NUX5 634 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 GOLGA6AQ9NYA3 693 aa4□□□□□ -1.77
SNHG1-220ENST00000544550 CPNE7Q9UBL6 633 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms