RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 PGGT1BP53609 377 aa14.14□□□□□ -0.15
TNFRSF1A-216ENST00000543995 BMPR2Q13873 1038 aa14.14□□□□□ -0.15
TNFRSF1A-216ENST00000543995 ZNF460Q14592 562 aa14.14□□□□□ -0.15
TNFRSF1A-216ENST00000543995 CCDC157Q569K6 752 aa14.14□□□□□ -0.15
TNFRSF1A-216ENST00000543995 MROH9Q5TGP6 573 aa14.14□□□□□ -0.15
TNFRSF1A-216ENST00000543995 PAQR3Q6TCH7 311 aa14.14□□□□□ -0.15
TNFRSF1A-216ENST00000543995 IFI44Q8TCB0 444 aa14.14□□□□□ -0.15
TNFRSF1A-216ENST00000543995 NAT6Q93015 286 aa14.14□□□□□ -0.15
TNFRSF1A-216ENST00000543995 CCDC74AQ96AQ1 378 aa14.14□□□□□ -0.15
TNFRSF1A-216ENST00000543995 SH3KBP1Q96B97 665 aa14.14□□□□□ -0.15
TNFRSF1A-216ENST00000543995 FOPNLQ96NB1 174 aa14.14□□□□□ -0.15
TNFRSF1A-216ENST00000543995 SLC38A3Q99624 504 aa14.14□□□□□ -0.15
TNFRSF1A-216ENST00000543995 POT1Q9NUX5 634 aa14.14□□□□□ -0.15
TNFRSF1A-216ENST00000543995 ZNF180Q9UJW8 692 aa14.14□□□□□ -0.15
TNFRSF1A-216ENST00000543995 RNF215Q9Y6U7 377 aa14.14□□□□□ -0.15
TNFRSF1A-216ENST00000543995 U3KQA8 63 aa14.14□□□□□ -0.15
TNFRSF1A-216ENST00000543995 GOLGA4Q13439 2230 aaKnown RBP14.13□□□□□ -0.15
TNFRSF1A-216ENST00000543995 PRAMEF33A0A0G2JMD5 474 aa14.13□□□□□ -0.15
TNFRSF1A-216ENST00000543995 PPM1DO15297 605 aa14.13□□□□□ -0.15
TNFRSF1A-216ENST00000543995 KRT38O76015 456 aa14.13□□□□□ -0.15
TNFRSF1A-216ENST00000543995 ENO3P13929 434 aaPredicted RBP14.13□□□□□ -0.15
TNFRSF1A-216ENST00000543995 KCNA4P22459 653 aa14.13□□□□□ -0.15
TNFRSF1A-216ENST00000543995 ACP1P24666 158 aa14.13□□□□□ -0.15
TNFRSF1A-216ENST00000543995 ACADLP28330 430 aa14.13□□□□□ -0.15
TNFRSF1A-216ENST00000543995 ATP5DP30049 168 aa14.13□□□□□ -0.15
TNFRSF1A-216ENST00000543995 IL2P60568 153 aa14.13□□□□□ -0.15
TNFRSF1A-216ENST00000543995 UBE2IP63279 158 aaKnown RBP14.13□□□□□ -0.15
TNFRSF1A-216ENST00000543995 GBX1Q14549 363 aa14.13□□□□□ -0.15
TNFRSF1A-216ENST00000543995 LGSNQ5TDP6 509 aa14.13□□□□□ -0.15
TNFRSF1A-216ENST00000543995 RAPH1Q70E73 1250 aa14.13□□□□□ -0.15
TNFRSF1A-216ENST00000543995 ZNF761Q86XN6 746 aaPredicted RBP14.13□□□□□ -0.15
TNFRSF1A-216ENST00000543995 SPNS2Q8IVW8 549 aa14.13□□□□□ -0.15
TNFRSF1A-216ENST00000543995 CEP97Q8IW35 865 aa14.13□□□□□ -0.15
TNFRSF1A-216ENST00000543995 PHC3Q8NDX5 983 aa14.13□□□□□ -0.15
TNFRSF1A-216ENST00000543995 DCAKDQ8WVC6 231 aa14.13□□□□□ -0.15
TNFRSF1A-216ENST00000543995 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.13□□□□□ -0.15
TNFRSF1A-216ENST00000543995 TRIT1Q9H3H1 467 aaKnown RBP14.13□□□□□ -0.15
TNFRSF1A-216ENST00000543995 SYTL2Q9HCH5 934 aa14.13□□□□□ -0.15
TNFRSF1A-216ENST00000543995 GPAMQ9HCL2 828 aa14.13□□□□□ -0.15
TNFRSF1A-216ENST00000543995 RUVBL2Q9Y230 463 aaKnown RBP14.13□□□□□ -0.15
TNFRSF1A-216ENST00000543995 SMIM23A6NLE4 172 aa14.12□□□□□ -0.15
TNFRSF1A-216ENST00000543995 PHGDHO43175 533 aaKnown RBP14.12□□□□□ -0.15
TNFRSF1A-216ENST00000543995 RPN2P04844 631 aa14.12□□□□□ -0.15
TNFRSF1A-216ENST00000543995 CEACAM1P13688 526 aa14.12□□□□□ -0.15
TNFRSF1A-216ENST00000543995 ZNF37AP17032 561 aaPredicted RBP14.12□□□□□ -0.15
TNFRSF1A-216ENST00000543995 CNTFP26441 200 aa14.12□□□□□ -0.15
TNFRSF1A-216ENST00000543995 NDUFS1P28331 727 aa14.12□□□□□ -0.15
TNFRSF1A-216ENST00000543995 ALDH4A1P30038 563 aa14.12□□□□□ -0.15
TNFRSF1A-216ENST00000543995 RAB10P61026 200 aa14.12□□□□□ -0.15
TNFRSF1A-216ENST00000543995 IFFO1Q0D2I5 559 aa14.12□□□□□ -0.15
TNFRSF1A-216ENST00000543995 PLCL1Q15111 1095 aa14.12□□□□□ -0.15
TNFRSF1A-216ENST00000543995 PERM1Q5SV97 790 aa14.12□□□□□ -0.15
TNFRSF1A-216ENST00000543995 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.12□□□□□ -0.15
TNFRSF1A-216ENST00000543995 LRRC8EQ6NSJ5 796 aa14.12□□□□□ -0.15
TNFRSF1A-216ENST00000543995 NEK10Q6ZWH5 1172 aa14.12□□□□□ -0.15
TNFRSF1A-216ENST00000543995 PIWIL4Q7Z3Z4 852 aaKnown RBP14.12□□□□□ -0.15
TNFRSF1A-216ENST00000543995 RBM12BQ8IXT5 1001 aaKnown RBP14.12□□□□□ -0.15
TNFRSF1A-216ENST00000543995 MYO1HQ8N1T3 1032 aa14.12□□□□□ -0.15
TNFRSF1A-216ENST00000543995 MREGQ8N565 214 aa14.12□□□□□ -0.15
TNFRSF1A-216ENST00000543995 Q8N9G6 341 aaPredicted RBP14.12□□□□□ -0.15
TNFRSF1A-216ENST00000543995 EEF1AKMT1Q8WVE0 214 aa14.12□□□□□ -0.15
TNFRSF1A-216ENST00000543995 LINGO1Q96FE5 620 aa14.12□□□□□ -0.15
TNFRSF1A-216ENST00000543995 CCDC3Q9BQI4 270 aa14.12□□□□□ -0.15
TNFRSF1A-216ENST00000543995 DHRS4Q9BTZ2 278 aa14.12□□□□□ -0.15
TNFRSF1A-216ENST00000543995 MVB12BQ9H7P6 319 aa14.12□□□□□ -0.15
TNFRSF1A-216ENST00000543995 SYNDIG1Q9H7V2 258 aa14.12□□□□□ -0.15
TNFRSF1A-216ENST00000543995 POPDC3Q9HBV1 291 aa14.12□□□□□ -0.15
TNFRSF1A-216ENST00000543995 SLC40A1Q9NP59 571 aa14.12□□□□□ -0.15
TNFRSF1A-216ENST00000543995 FETUBQ9UGM5 382 aa14.12□□□□□ -0.15
TNFRSF1A-216ENST00000543995 SLC24A2Q9UI40 661 aa14.12□□□□□ -0.15
TNFRSF1A-216ENST00000543995 TDRKHQ9Y2W6 561 aaKnown RBP14.12□□□□□ -0.15
TNFRSF1A-216ENST00000543995 GVINP1Q7Z2Y8 2422 aa14.11□□□□□ -0.15
TNFRSF1A-216ENST00000543995 SPAARA0A1B0GVQ0 90 aa14.11□□□□□ -0.15
TNFRSF1A-216ENST00000543995 DCDC2BA2VCK2 349 aa14.11□□□□□ -0.15
TNFRSF1A-216ENST00000543995 EIF3FO00303 357 aaPredicted RBP14.11□□□□□ -0.15
TNFRSF1A-216ENST00000543995 ZW10O43264 779 aa14.11□□□□□ -0.15
TNFRSF1A-216ENST00000543995 KRT37O76014 449 aa14.11□□□□□ -0.15
TNFRSF1A-216ENST00000543995 NUDT17P0C025 328 aa14.11□□□□□ -0.15
TNFRSF1A-216ENST00000543995 MPC1LP0DKB6 136 aa14.11□□□□□ -0.15
TNFRSF1A-216ENST00000543995 PNLIPP16233 465 aa14.11□□□□□ -0.15
TNFRSF1A-216ENST00000543995 GCAP28676 217 aa14.11□□□□□ -0.15
TNFRSF1A-216ENST00000543995 TYK2P29597 1187 aa14.11□□□□□ -0.15
TNFRSF1A-216ENST00000543995 ACADVLP49748 655 aa14.11□□□□□ -0.15
TNFRSF1A-216ENST00000543995 SERPINB8P50452 374 aa14.11□□□□□ -0.15
TNFRSF1A-216ENST00000543995 SIM1P81133 766 aaPredicted RBP14.11□□□□□ -0.15
TNFRSF1A-216ENST00000543995 PRKG2Q13237 762 aa14.11□□□□□ -0.15
TNFRSF1A-216ENST00000543995 GPR18Q14330 331 aa14.11□□□□□ -0.15
TNFRSF1A-216ENST00000543995 TTC23LQ6PF05 361 aa14.11□□□□□ -0.15
TNFRSF1A-216ENST00000543995 ADGRD1Q6QNK2 874 aa14.11□□□□□ -0.15
TNFRSF1A-216ENST00000543995 UNC5DQ6UXZ4 953 aa14.11□□□□□ -0.15
TNFRSF1A-216ENST00000543995 TMEM26Q6ZUK4 368 aa14.11□□□□□ -0.15
TNFRSF1A-216ENST00000543995 CMC1Q7Z7K0 106 aa14.11□□□□□ -0.15
TNFRSF1A-216ENST00000543995 GLRX5Q86SX6 157 aa14.11□□□□□ -0.15
TNFRSF1A-216ENST00000543995 TBC1D21Q8IYX1 336 aa14.11□□□□□ -0.15
TNFRSF1A-216ENST00000543995 OR5AR1Q8NGP9 310 aa14.11□□□□□ -0.15
TNFRSF1A-216ENST00000543995 OR2W6PQ8NHA6 318 aa14.11□□□□□ -0.15
TNFRSF1A-216ENST00000543995 OR5K2Q8NHB8 316 aa14.11□□□□□ -0.15
TNFRSF1A-216ENST00000543995 HGH1Q9BTY7 390 aa14.11□□□□□ -0.15
TNFRSF1A-216ENST00000543995 PPCSQ9HAB8 311 aa14.11□□□□□ -0.15
TNFRSF1A-216ENST00000543995 KCNK4Q9NYG8 393 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms