RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 ULK4Q96C45 1275 aa21.95■■□□□ 1.1
CDKN3-207ENST00000543789 DPH2Q9BQC3 489 aaPredicted RBP21.95■■□□□ 1.1
CDKN3-207ENST00000543789 GBA3Q9H227 469 aa21.95■■□□□ 1.1
CDKN3-207ENST00000543789 hCG_1818297A0A087WSY0 165 aa21.94■■□□□ 1.1
CDKN3-207ENST00000543789 A1L4Q6 167 aa21.94■■□□□ 1.1
CDKN3-207ENST00000543789 AGAP14A8MT82 685 aa21.94■■□□□ 1.1
CDKN3-207ENST00000543789 C9J4A7 227 aa21.94■■□□□ 1.1
CDKN3-207ENST00000543789 E7EQ34 232 aa21.94■■□□□ 1.1
CDKN3-207ENST00000543789 BTN3A3O00478 584 aa21.94■■□□□ 1.1
CDKN3-207ENST00000543789 TPM1P09493 284 aa21.94■■□□□ 1.1
CDKN3-207ENST00000543789 ATP1B2P14415 290 aaPredicted RBP21.94■■□□□ 1.1
CDKN3-207ENST00000543789 ST6GAL1P15907 406 aa21.94■■□□□ 1.1
CDKN3-207ENST00000543789 AGXTP21549 392 aa21.94■■□□□ 1.1
CDKN3-207ENST00000543789 LMAN1P49257 510 aa21.94■■□□□ 1.1
CDKN3-207ENST00000543789 ATP1A4Q13733 1029 aa21.94■■□□□ 1.1
CDKN3-207ENST00000543789 HEXDCQ8WVB3 486 aa21.94■■□□□ 1.1
CDKN3-207ENST00000543789 SGSM3Q96HU1 749 aa21.94■■□□□ 1.1
CDKN3-207ENST00000543789 RBM41Q96IZ5 413 aaKnown RBP21.94■■□□□ 1.1
CDKN3-207ENST00000543789 PITPNM3Q9BZ71 974 aa21.94■■□□□ 1.1
CDKN3-207ENST00000543789 TFB2MQ9H5Q4 396 aaKnown RBP21.94■■□□□ 1.1
CDKN3-207ENST00000543789 CFAP99D6REC4 459 aa21.93■■□□□ 1.1
CDKN3-207ENST00000543789 IFRD1O00458 451 aaPredicted RBP21.93■■□□□ 1.1
CDKN3-207ENST00000543789 ZNF749O43361 778 aa21.93■■□□□ 1.1
CDKN3-207ENST00000543789 CBFA2T2O43439 604 aa21.93■■□□□ 1.1
CDKN3-207ENST00000543789 CRTAMO95727 393 aa21.93■■□□□ 1.1
CDKN3-207ENST00000543789 HBQ1P09105 142 aa21.93■■□□□ 1.1
CDKN3-207ENST00000543789 RBL1P28749 1068 aa21.93■■□□□ 1.1
CDKN3-207ENST00000543789 ADRA1AP35348 466 aa21.93■■□□□ 1.1
CDKN3-207ENST00000543789 ITPRIPL1Q6GPH6 555 aa21.93■■□□□ 1.1
CDKN3-207ENST00000543789 RAB43Q86YS6 212 aa21.93■■□□□ 1.1
CDKN3-207ENST00000543789 CCDC50Q8IVM0 306 aa21.93■■□□□ 1.1
CDKN3-207ENST00000543789 KATNAL2Q8IYT4 538 aa21.93■■□□□ 1.1
CDKN3-207ENST00000543789 NXPE1Q8N323 547 aa21.93■■□□□ 1.1
CDKN3-207ENST00000543789 TRAPPC9Q96Q05 1148 aa21.93■■□□□ 1.1
CDKN3-207ENST00000543789 COPS8Q99627 209 aa21.93■■□□□ 1.1
CDKN3-207ENST00000543789 APOL2Q9BQE5 337 aa21.93■■□□□ 1.1
CDKN3-207ENST00000543789 GORASP1Q9BQQ3 440 aa21.93■■□□□ 1.1
CDKN3-207ENST00000543789 DHRS4Q9BTZ2 278 aa21.93■■□□□ 1.1
CDKN3-207ENST00000543789 OR52A5Q9H2C5 316 aa21.93■■□□□ 1.1
CDKN3-207ENST00000543789 FAM96AQ9H5X1 160 aa21.93■■□□□ 1.1
CDKN3-207ENST00000543789 C10orf88Q9H8K7 445 aa21.93■■□□□ 1.1
CDKN3-207ENST00000543789 C5AR2Q9P296 337 aa21.93■■□□□ 1.1
CDKN3-207ENST00000543789 PADI2Q9Y2J8 665 aa21.93■■□□□ 1.1
CDKN3-207ENST00000543789 AAR2Q9Y312 384 aaKnown RBP21.93■■□□□ 1.1
CDKN3-207ENST00000543789 TNRC6AQ8NDV7 1962 aaKnown RBP21.92■■□□□ 1.1
CDKN3-207ENST00000543789 C2orf74A8MZ97 194 aa21.92■■□□□ 1.1
CDKN3-207ENST00000543789 H7C0C1 242 aa21.92■■□□□ 1.1
CDKN3-207ENST00000543789 BTN3A1O00481 513 aa21.92■■□□□ 1.1
CDKN3-207ENST00000543789 ITGALP20701 1170 aa21.92■■□□□ 1.1
CDKN3-207ENST00000543789 ATP5OP48047 213 aa21.92■■□□□ 1.1
CDKN3-207ENST00000543789 RAPSNQ13702 412 aa21.92■■□□□ 1.1
CDKN3-207ENST00000543789 SARM1Q6SZW1 724 aa21.92■■□□□ 1.1
CDKN3-207ENST00000543789 SNX20Q7Z614 316 aa21.92■■□□□ 1.1
CDKN3-207ENST00000543789 AMIGO1Q86WK6 493 aa21.92■■□□□ 1.1
CDKN3-207ENST00000543789 PHC3Q8NDX5 983 aa21.92■■□□□ 1.1
CDKN3-207ENST00000543789 OR52E1Q8NGJ3 308 aa21.92■■□□□ 1.1
CDKN3-207ENST00000543789 OR13C4Q8NGS5 318 aa21.92■■□□□ 1.1
CDKN3-207ENST00000543789 NRTNQ99748 197 aa21.92■■□□□ 1.1
CDKN3-207ENST00000543789 FERMT1Q9BQL6 677 aa21.92■■□□□ 1.1
CDKN3-207ENST00000543789 HEMGNQ9BXL5 484 aa21.92■■□□□ 1.1
CDKN3-207ENST00000543789 KLHL25Q9H0H3 589 aa21.92■■□□□ 1.1
CDKN3-207ENST00000543789 MVB12BQ9H7P6 319 aa21.92■■□□□ 1.1
CDKN3-207ENST00000543789 COG4Q9H9E3 785 aa21.92■■□□□ 1.1
CDKN3-207ENST00000543789 PVRP15151 417 aa21.91■■□□□ 1.1
CDKN3-207ENST00000543789 OTX2P32243 289 aa21.91■■□□□ 1.1
CDKN3-207ENST00000543789 HADHAP40939 763 aa21.91■■□□□ 1.1
CDKN3-207ENST00000543789 CD151P48509 253 aa21.91■■□□□ 1.1
CDKN3-207ENST00000543789 TMPRSS15P98073 1019 aa21.91■■□□□ 1.1
CDKN3-207ENST00000543789 OLIG2Q13516 323 aa21.91■■□□□ 1.1
CDKN3-207ENST00000543789 PRPSAP1Q14558 356 aa21.91■■□□□ 1.1
CDKN3-207ENST00000543789 SSPNQ14714 243 aa21.91■■□□□ 1.1
CDKN3-207ENST00000543789 PLEKHN1Q494U1 663 aaPredicted RBP21.91■■□□□ 1.1
CDKN3-207ENST00000543789 VWA5B1Q5TIE3 1220 aa21.91■■□□□ 1.1
CDKN3-207ENST00000543789 ZNF449Q6P9G9 518 aa21.91■■□□□ 1.1
CDKN3-207ENST00000543789 CDHR3Q6ZTQ4 885 aa21.91■■□□□ 1.1
CDKN3-207ENST00000543789 GPR135Q8IZ08 494 aa21.91■■□□□ 1.1
CDKN3-207ENST00000543789 SNRNP40Q96DI7 357 aaKnown RBP21.91■■□□□ 1.1
CDKN3-207ENST00000543789 C19orf60Q96EN9 201 aa21.91■■□□□ 1.1
CDKN3-207ENST00000543789 IP6K3Q96PC2 410 aa21.91■■□□□ 1.1
CDKN3-207ENST00000543789 C17orf62Q9BQA9 187 aa21.91■■□□□ 1.1
CDKN3-207ENST00000543789 GOLPH3Q9H4A6 298 aa21.91■■□□□ 1.1
CDKN3-207ENST00000543789 VPS37BQ9H9H4 285 aa21.91■■□□□ 1.1
CDKN3-207ENST00000543789 ACTR10Q9NZ32 417 aa21.91■■□□□ 1.1
CDKN3-207ENST00000543789 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.91■■□□□ 1.1
CDKN3-207ENST00000543789 UNC79Q9P2D8 2635 aa21.9■■□□□ 1.1
CDKN3-207ENST00000543789 MED13Q9UHV7 2174 aa21.9■■□□□ 1.1
CDKN3-207ENST00000543789 KRT86O43790 486 aa21.9■■□□□ 1.1
CDKN3-207ENST00000543789 MFAP3LO75121 409 aa21.9■■□□□ 1.1
CDKN3-207ENST00000543789 KLF7O75840 302 aaPredicted RBP21.9■■□□□ 1.1
CDKN3-207ENST00000543789 HADHBP55084 474 aaKnown RBP21.9■■□□□ 1.1
CDKN3-207ENST00000543789 PRKG2Q13237 762 aa21.9■■□□□ 1.1
CDKN3-207ENST00000543789 MSLNQ13421 630 aaPredicted RBP21.9■■□□□ 1.1
CDKN3-207ENST00000543789 KYNUQ16719 465 aa21.9■■□□□ 1.1
CDKN3-207ENST00000543789 MLIPQ5VWP3 458 aa21.9■■□□□ 1.1
CDKN3-207ENST00000543789 ZNF385CQ66K41 422 aaPredicted RBP21.9■■□□□ 1.1
CDKN3-207ENST00000543789 BBS12Q6ZW61 710 aa21.9■■□□□ 1.1
CDKN3-207ENST00000543789 ADGRF3Q8IZF5 1079 aa21.9■■□□□ 1.1
CDKN3-207ENST00000543789 TFGQ92734 400 aaPredicted RBP21.9■■□□□ 1.1
CDKN3-207ENST00000543789 N4BP2L2Q92802 583 aaPredicted RBP21.9■■□□□ 1.1
CDKN3-207ENST00000543789 FER1L6-AS2Q96M78 137 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms