RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 UQCRFS1P47985 274 aa16.91■□□□□ 0.3
PPP1CA-210ENST00000542876 RRADP55042 308 aa16.91■□□□□ 0.3
PPP1CA-210ENST00000542876 EIF3EP60228 445 aaKnown RBP16.91■□□□□ 0.3
PPP1CA-210ENST00000542876 OTUD4Q01804 1114 aaKnown RBP16.91■□□□□ 0.3
PPP1CA-210ENST00000542876 ABRQ12979 859 aa16.91■□□□□ 0.3
PPP1CA-210ENST00000542876 OLIG2Q13516 323 aa16.91■□□□□ 0.3
PPP1CA-210ENST00000542876 GPR33Q49SQ1 333 aa16.91■□□□□ 0.3
PPP1CA-210ENST00000542876 C4orf17Q53FE4 359 aa16.91■□□□□ 0.3
PPP1CA-210ENST00000542876 PRAMEF17Q5VTA0 474 aa16.91■□□□□ 0.3
PPP1CA-210ENST00000542876 PAPD7Q5XG87 772 aaKnown RBP16.91■□□□□ 0.3
PPP1CA-210ENST00000542876 SARM1Q6SZW1 724 aa16.91■□□□□ 0.3
PPP1CA-210ENST00000542876 HPS6Q86YV9 775 aa16.91■□□□□ 0.3
PPP1CA-210ENST00000542876 SYTL1Q8IYJ3 562 aa16.91■□□□□ 0.3
PPP1CA-210ENST00000542876 OR1L3Q8NH93 324 aa16.91■□□□□ 0.3
PPP1CA-210ENST00000542876 KRT35Q92764 455 aa16.91■□□□□ 0.3
PPP1CA-210ENST00000542876 N4BP2L2Q92802 583 aaPredicted RBP16.91■□□□□ 0.3
PPP1CA-210ENST00000542876 C19orf43Q9BQ61 176 aa16.91■□□□□ 0.3
PPP1CA-210ENST00000542876 TBL1YQ9BQ87 522 aa16.91■□□□□ 0.3
PPP1CA-210ENST00000542876 GORASP1Q9BQQ3 440 aa16.91■□□□□ 0.3
PPP1CA-210ENST00000542876 TSPY26PQ9H489 355 aa16.91■□□□□ 0.3
PPP1CA-210ENST00000542876 COG4Q9H9E3 785 aa16.91■□□□□ 0.3
PPP1CA-210ENST00000542876 FEZ2Q9UHY8 353 aaPredicted RBP16.91■□□□□ 0.3
PPP1CA-210ENST00000542876 EFR3BQ9Y2G0 817 aa16.91■□□□□ 0.3
PPP1CA-210ENST00000542876 PCDHA13Q9Y5I0 950 aa16.91■□□□□ 0.3
PPP1CA-210ENST00000542876 USP9XQ93008 2570 aaPredicted RBP16.9■□□□□ 0.3
PPP1CA-210ENST00000542876 C2orf74A8MZ97 194 aa16.9■□□□□ 0.3
PPP1CA-210ENST00000542876 C9J4A7 227 aa16.9■□□□□ 0.3
PPP1CA-210ENST00000542876 E7EQ34 232 aa16.9■□□□□ 0.3
PPP1CA-210ENST00000542876 ZNF189O75820 626 aaPredicted RBP16.9■□□□□ 0.3
PPP1CA-210ENST00000542876 HBQ1P09105 142 aa16.9■□□□□ 0.3
PPP1CA-210ENST00000542876 MSL3P1P0C860 447 aa16.9■□□□□ 0.3
PPP1CA-210ENST00000542876 RBP3P10745 1247 aa16.9■□□□□ 0.3
PPP1CA-210ENST00000542876 AGXTP21549 392 aa16.9■□□□□ 0.3
PPP1CA-210ENST00000542876 MC4RP32245 332 aa16.9■□□□□ 0.3
PPP1CA-210ENST00000542876 RORAP35398 523 aa16.9■□□□□ 0.3
PPP1CA-210ENST00000542876 CD151P48509 253 aa16.9■□□□□ 0.3
PPP1CA-210ENST00000542876 VAV2P52735 878 aa16.9■□□□□ 0.3
PPP1CA-210ENST00000542876 ZNF140P52738 457 aaPredicted RBP16.9■□□□□ 0.3
PPP1CA-210ENST00000542876 ITGA1P56199 1179 aa16.9■□□□□ 0.3
PPP1CA-210ENST00000542876 ZRANB3Q5FWF4 1079 aa16.9■□□□□ 0.3
PPP1CA-210ENST00000542876 MED25Q71SY5 747 aa16.9■□□□□ 0.3
PPP1CA-210ENST00000542876 AMIGO1Q86WK6 493 aa16.9■□□□□ 0.3
PPP1CA-210ENST00000542876 CCDC170Q8IYT3 715 aa16.9■□□□□ 0.3
PPP1CA-210ENST00000542876 TMEM102Q8N9M5 508 aaPredicted RBP16.9■□□□□ 0.3
PPP1CA-210ENST00000542876 RNF214Q8ND24 703 aa16.9■□□□□ 0.3
PPP1CA-210ENST00000542876 ADAMTS17Q8TE56 1095 aa16.9■□□□□ 0.3
PPP1CA-210ENST00000542876 DPH2Q9BQC3 489 aaPredicted RBP16.9■□□□□ 0.3
PPP1CA-210ENST00000542876 OSBPL8Q9BZF1 889 aa16.9■□□□□ 0.3
PPP1CA-210ENST00000542876 TFB2MQ9H5Q4 396 aaKnown RBP16.9■□□□□ 0.3
PPP1CA-210ENST00000542876 MVB12BQ9H7P6 319 aa16.9■□□□□ 0.3
PPP1CA-210ENST00000542876 SLAMF7Q9NQ25 335 aa16.9■□□□□ 0.3
PPP1CA-210ENST00000542876 PCMTD2Q9NV79 361 aa16.9■□□□□ 0.3
PPP1CA-210ENST00000542876 ZDHHC3Q9NYG2 299 aa16.9■□□□□ 0.3
PPP1CA-210ENST00000542876 PADI2Q9Y2J8 665 aa16.9■□□□□ 0.3
PPP1CA-210ENST00000542876 SPTAN1Q13813 2472 aaKnown RBP16.9■□□□□ 0.3
PPP1CA-210ENST00000542876 SPENQ96T58 3664 aaKnown RBP16.9■□□□□ 0.3
PPP1CA-210ENST00000542876 BTN3A3O00478 584 aa16.89■□□□□ 0.29
PPP1CA-210ENST00000542876 BTN3A1O00481 513 aa16.89■□□□□ 0.29
PPP1CA-210ENST00000542876 ZNF185O15231 689 aa16.89■□□□□ 0.29
PPP1CA-210ENST00000542876 ST6GAL1P15907 406 aa16.89■□□□□ 0.29
PPP1CA-210ENST00000542876 VARSP26640 1264 aaKnown RBP16.89■□□□□ 0.29
PPP1CA-210ENST00000542876 CTNNA1P35221 906 aaKnown RBP16.89■□□□□ 0.29
PPP1CA-210ENST00000542876 CYLC1P35663 651 aaPredicted RBP16.89■□□□□ 0.29
PPP1CA-210ENST00000542876 LMAN1P49257 510 aa16.89■□□□□ 0.29
PPP1CA-210ENST00000542876 NAP1L1P55209 391 aaKnown RBP16.89■□□□□ 0.29
PPP1CA-210ENST00000542876 RPA4Q13156 261 aa16.89■□□□□ 0.29
PPP1CA-210ENST00000542876 TBX2Q13207 712 aaPredicted RBP16.89■□□□□ 0.29
PPP1CA-210ENST00000542876 LCN10Q6JVE6 187 aa16.89■□□□□ 0.29
PPP1CA-210ENST00000542876 TAS2R42Q7RTR8 314 aa16.89■□□□□ 0.29
PPP1CA-210ENST00000542876 RAB43Q86YS6 212 aa16.89■□□□□ 0.29
PPP1CA-210ENST00000542876 GPR135Q8IZ08 494 aa16.89■□□□□ 0.29
PPP1CA-210ENST00000542876 PHC3Q8NDX5 983 aa16.89■□□□□ 0.29
PPP1CA-210ENST00000542876 OR52E1Q8NGJ3 308 aa16.89■□□□□ 0.29
PPP1CA-210ENST00000542876 CCDC110Q8TBZ0 833 aa16.89■□□□□ 0.29
PPP1CA-210ENST00000542876 SGSM3Q96HU1 749 aa16.89■□□□□ 0.29
PPP1CA-210ENST00000542876 CALR3Q96L12 384 aaKnown RBP16.89■□□□□ 0.29
PPP1CA-210ENST00000542876 SPATA13Q96N96 652 aa16.89■□□□□ 0.29
PPP1CA-210ENST00000542876 C17orf62Q9BQA9 187 aa16.89■□□□□ 0.29
PPP1CA-210ENST00000542876 PITPNM3Q9BZ71 974 aa16.89■□□□□ 0.29
PPP1CA-210ENST00000542876 OR52A5Q9H2C5 316 aa16.89■□□□□ 0.29
PPP1CA-210ENST00000542876 MAP10Q9P2G4 905 aa16.89■□□□□ 0.29
PPP1CA-210ENST00000542876 MAP4K5Q9Y4K4 846 aa16.89■□□□□ 0.29
PPP1CA-210ENST00000542876 PCDHA3Q9Y5H8 950 aa16.89■□□□□ 0.29
PPP1CA-210ENST00000542876 A6NL46 340 aa16.88■□□□□ 0.29
PPP1CA-210ENST00000542876 PJA2O43164 708 aa16.88■□□□□ 0.29
PPP1CA-210ENST00000542876 ZNF749O43361 778 aa16.88■□□□□ 0.29
PPP1CA-210ENST00000542876 CEACAM4O75871 244 aa16.88■□□□□ 0.29
PPP1CA-210ENST00000542876 SORBS2O94875 1100 aaKnown RBP16.88■□□□□ 0.29
PPP1CA-210ENST00000542876 TJP3O95049 919 aa16.88■□□□□ 0.29
PPP1CA-210ENST00000542876 PTMAP06454 111 aaKnown RBP16.88■□□□□ 0.29
PPP1CA-210ENST00000542876 GSTM1P09488 218 aa16.88■□□□□ 0.29
PPP1CA-210ENST00000542876 GSTM4Q03013 218 aa16.88■□□□□ 0.29
PPP1CA-210ENST00000542876 PRKG2Q13237 762 aa16.88■□□□□ 0.29
PPP1CA-210ENST00000542876 SPARCL1Q14515 664 aa16.88■□□□□ 0.29
PPP1CA-210ENST00000542876 NCF4Q15080 339 aa16.88■□□□□ 0.29
PPP1CA-210ENST00000542876 INPP5JQ15735 1006 aaPredicted RBP16.88■□□□□ 0.29
PPP1CA-210ENST00000542876 PTCHD3Q3KNS1 767 aa16.88■□□□□ 0.29
PPP1CA-210ENST00000542876 SERPINA9Q86WD7 417 aa16.88■□□□□ 0.29
PPP1CA-210ENST00000542876 FDCSPQ8NFU4 85 aa16.88■□□□□ 0.29
PPP1CA-210ENST00000542876 TFGQ92734 400 aaPredicted RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms