RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 ZNF273Q14593 569 aa4.14□□□□□ -1.75
SNHG1-217ENST00000541578 PTPRCAPQ14761 206 aa4.14□□□□□ -1.75
SNHG1-217ENST00000541578 C2orf76Q3KRA6 126 aa4.14□□□□□ -1.75
SNHG1-217ENST00000541578 ODF3L2Q3SX64 289 aa4.14□□□□□ -1.75
SNHG1-217ENST00000541578 SLC10A5Q5PT55 438 aa4.14□□□□□ -1.75
SNHG1-217ENST00000541578 WASHC2DQ5SRD0 308 aa4.14□□□□□ -1.75
SNHG1-217ENST00000541578 MPP7Q5T2T1 576 aa4.14□□□□□ -1.75
SNHG1-217ENST00000541578 TMEM71Q6P5X7 295 aa4.14□□□□□ -1.75
SNHG1-217ENST00000541578 KCTD18Q6PI47 426 aaPredicted RBP4.14□□□□□ -1.75
SNHG1-217ENST00000541578 CEP57Q86XR8 500 aa4.14□□□□□ -1.75
SNHG1-217ENST00000541578 MIGA1Q8NAN2 632 aa4.14□□□□□ -1.75
SNHG1-217ENST00000541578 B4GALNT2Q8NHY0 566 aa4.14□□□□□ -1.75
SNHG1-217ENST00000541578 ARRDC2Q8TBH0 407 aa4.14□□□□□ -1.75
SNHG1-217ENST00000541578 TRIB2Q92519 343 aa4.14□□□□□ -1.75
SNHG1-217ENST00000541578 INPP5DQ92835 1189 aa4.14□□□□□ -1.75
SNHG1-217ENST00000541578 EXOC4Q96A65 974 aa4.14□□□□□ -1.75
SNHG1-217ENST00000541578 ORAI1Q96D31 301 aa4.14□□□□□ -1.75
SNHG1-217ENST00000541578 ERO1AQ96HE7 468 aa4.14□□□□□ -1.75
SNHG1-217ENST00000541578 LINC00615Q96LM1 132 aaPredicted RBP4.14□□□□□ -1.75
SNHG1-217ENST00000541578 DACH2Q96NX9 599 aa4.14□□□□□ -1.75
SNHG1-217ENST00000541578 ZPBPQ9BS86 351 aa4.14□□□□□ -1.75
SNHG1-217ENST00000541578 ACAT2Q9BWD1 397 aa4.14□□□□□ -1.75
SNHG1-217ENST00000541578 FUT8Q9BYC5 575 aa4.14□□□□□ -1.75
SNHG1-217ENST00000541578 CATSPERBQ9H7T0 1116 aa4.14□□□□□ -1.75
SNHG1-217ENST00000541578 MKKSQ9NPJ1 570 aaPredicted RBP4.14□□□□□ -1.75
SNHG1-217ENST00000541578 SIRT3Q9NTG7 399 aaPredicted RBP4.14□□□□□ -1.75
SNHG1-217ENST00000541578 ABCB8Q9NUT2 735 aa4.14□□□□□ -1.75
SNHG1-217ENST00000541578 DPP3Q9NY33 737 aa4.14□□□□□ -1.75
SNHG1-217ENST00000541578 OR6C3Q9NZP0 311 aa4.14□□□□□ -1.75
SNHG1-217ENST00000541578 DNAJB9Q9UBS3 223 aa4.14□□□□□ -1.75
SNHG1-217ENST00000541578 ACAD8Q9UKU7 415 aa4.14□□□□□ -1.75
SNHG1-217ENST00000541578 ODF2LQ9ULJ1 636 aa4.14□□□□□ -1.75
SNHG1-217ENST00000541578 FMN2Q9NZ56 1722 aa4.14□□□□□ -1.75
SNHG1-217ENST00000541578 THSD7AQ9UPZ6 1657 aa4.13□□□□□ -1.75
SNHG1-217ENST00000541578 NRAPQ86VF7 1730 aa4.13□□□□□ -1.75
SNHG1-217ENST00000541578 RPS10-NUDT3A0A1W2PQS6 291 aa4.13□□□□□ -1.75
SNHG1-217ENST00000541578 PSMD14O00487 310 aa4.13□□□□□ -1.75
SNHG1-217ENST00000541578 MEIS2O14770 477 aa4.13□□□□□ -1.75
SNHG1-217ENST00000541578 TNFRSF13BO14836 293 aaPredicted RBP4.13□□□□□ -1.75
SNHG1-217ENST00000541578 NDUFS4O43181 175 aa4.13□□□□□ -1.75
SNHG1-217ENST00000541578 SPINT2O43291 252 aa4.13□□□□□ -1.75
SNHG1-217ENST00000541578 CELF2O95319 508 aaKnown RBP4.13□□□□□ -1.75
SNHG1-217ENST00000541578 MOCS3O95396 460 aa4.13□□□□□ -1.75
SNHG1-217ENST00000541578 KLKB1P03952 638 aa4.13□□□□□ -1.75
SNHG1-217ENST00000541578 SUPT20HL2P0C7V6 817 aa4.13□□□□□ -1.75
SNHG1-217ENST00000541578 MAOAP21397 527 aa4.13□□□□□ -1.75
SNHG1-217ENST00000541578 NR2F2P24468 414 aa4.13□□□□□ -1.75
SNHG1-217ENST00000541578 NMBRP28336 390 aa4.13□□□□□ -1.75
SNHG1-217ENST00000541578 HOXC8P31273 242 aa4.13□□□□□ -1.75
SNHG1-217ENST00000541578 ARRB2P32121 409 aa4.13□□□□□ -1.75
SNHG1-217ENST00000541578 STX2P32856 288 aa4.13□□□□□ -1.75
SNHG1-217ENST00000541578 RPL3P39023 403 aaKnown RBP4.13□□□□□ -1.75
SNHG1-217ENST00000541578 EIF2S3P41091 472 aaKnown RBP4.13□□□□□ -1.75
SNHG1-217ENST00000541578 MTHFRP42898 656 aa4.13□□□□□ -1.75
SNHG1-217ENST00000541578 MZT1Q08AG7 82 aa4.13□□□□□ -1.75
SNHG1-217ENST00000541578 EIF2S3LQ2VIR3 472 aaKnown RBP4.13□□□□□ -1.75
SNHG1-217ENST00000541578 DUS1LQ6P1R4 473 aaKnown RBP4.13□□□□□ -1.75
SNHG1-217ENST00000541578 SLC36A4Q6YBV0 504 aa4.13□□□□□ -1.75
SNHG1-217ENST00000541578 MTSS1LQ765P7 747 aa4.13□□□□□ -1.75
SNHG1-217ENST00000541578 OTOAQ7RTW8 1153 aa4.13□□□□□ -1.75
SNHG1-217ENST00000541578 SPATA19Q7Z5L4 167 aa4.13□□□□□ -1.75
SNHG1-217ENST00000541578 GLRX5Q86SX6 157 aa4.13□□□□□ -1.75
SNHG1-217ENST00000541578 SYCP3Q8IZU3 236 aa4.13□□□□□ -1.75
SNHG1-217ENST00000541578 EMC1Q8N766 993 aa4.13□□□□□ -1.75
SNHG1-217ENST00000541578 TEX45Q8NA69 505 aa4.13□□□□□ -1.75
SNHG1-217ENST00000541578 KDM1BQ8NB78 822 aa4.13□□□□□ -1.75
SNHG1-217ENST00000541578 EXD1Q8NHP7 514 aa4.13□□□□□ -1.75
SNHG1-217ENST00000541578 ATL1Q8WXF7 558 aa4.13□□□□□ -1.75
SNHG1-217ENST00000541578 ROBO4Q8WZ75 1007 aa4.13□□□□□ -1.75
SNHG1-217ENST00000541578 APBB2Q92870 758 aa4.13□□□□□ -1.75
SNHG1-217ENST00000541578 NAP1L5Q96NT1 182 aaPredicted RBP4.13□□□□□ -1.75
SNHG1-217ENST00000541578 NEK1Q96PY6 1258 aa4.13□□□□□ -1.75
SNHG1-217ENST00000541578 NTPCRQ9BSD7 190 aaKnown RBP4.13□□□□□ -1.75
SNHG1-217ENST00000541578 TMEM204Q9BSN7 226 aa4.13□□□□□ -1.75
SNHG1-217ENST00000541578 SF3B5Q9BWJ5 86 aaKnown RBP4.13□□□□□ -1.75
SNHG1-217ENST00000541578 POLDIP3Q9BY77 421 aaKnown RBP4.13□□□□□ -1.75
SNHG1-217ENST00000541578 ISCUQ9H1K1 167 aa4.13□□□□□ -1.75
SNHG1-217ENST00000541578 KLHL31Q9H511 634 aa4.13□□□□□ -1.75
SNHG1-217ENST00000541578 MAP6D1Q9H9H5 199 aa4.13□□□□□ -1.75
SNHG1-217ENST00000541578 CNGB3Q9NQW8 809 aa4.13□□□□□ -1.75
SNHG1-217ENST00000541578 WWOXQ9NZC7 414 aa4.13□□□□□ -1.75
SNHG1-217ENST00000541578 CPSF3Q9UKF6 684 aaKnown RBP4.13□□□□□ -1.75
SNHG1-217ENST00000541578 CDC14AQ9UNH5 594 aa4.13□□□□□ -1.75
SNHG1-217ENST00000541578 SNX7Q9UNH6 387 aa4.13□□□□□ -1.75
SNHG1-217ENST00000541578 WBP11Q9Y2W2 641 aaKnown RBP4.13□□□□□ -1.75
SNHG1-217ENST00000541578 LIPGQ9Y5X9 500 aa4.13□□□□□ -1.75
SNHG1-217ENST00000541578 UTRNP46939 3433 aa4.13□□□□□ -1.75
SNHG1-217ENST00000541578 OVOS2A0A0G2JMS6 1433 aa4.12□□□□□ -1.75
SNHG1-217ENST00000541578 OVOS2A0A0J9YW53 1432 aa4.12□□□□□ -1.75
SNHG1-217ENST00000541578 OVOS2Q6IE36 1432 aa4.12□□□□□ -1.75
SNHG1-217ENST00000541578 NRXN1Q9ULB1 1477 aa4.12□□□□□ -1.75
SNHG1-217ENST00000541578 PPLO60437 1756 aa4.12□□□□□ -1.75
SNHG1-217ENST00000541578 GTPBP10A4D1E9 387 aaKnown RBP4.12□□□□□ -1.75
SNHG1-217ENST00000541578 LRRD1A4D1F6 860 aa4.12□□□□□ -1.75
SNHG1-217ENST00000541578 LACTBL1A8MY62 500 aa4.12□□□□□ -1.75
SNHG1-217ENST00000541578 SSX4O60224 188 aa4.12□□□□□ -1.75
SNHG1-217ENST00000541578 FMO6PO60774 539 aa4.12□□□□□ -1.75
SNHG1-217ENST00000541578 TOMM70O94826 608 aa4.12□□□□□ -1.75
SNHG1-217ENST00000541578 BDKRB2P30411 391 aa4.12□□□□□ -1.75
SNHG1-217ENST00000541578 ALDH3A2P51648 485 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms