RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 COG4Q9H9E3 785 aa23.3■■□□□ 1.32
LEMD3-203ENST00000541171 ACTR5Q9H9F9 607 aaPredicted RBP23.3■■□□□ 1.32
LEMD3-203ENST00000541171 MLXIPLQ9NP71 852 aa23.3■■□□□ 1.32
LEMD3-203ENST00000541171 PCMTD2Q9NV79 361 aa23.3■■□□□ 1.32
LEMD3-203ENST00000541171 LUZP4Q9P127 313 aa23.3■■□□□ 1.32
LEMD3-203ENST00000541171 TCFL5Q9UL49 500 aa23.3■■□□□ 1.32
LEMD3-203ENST00000541171 SPTBP11277 2137 aa23.3■■□□□ 1.32
LEMD3-203ENST00000541171 MED13Q9UHV7 2174 aa23.3■■□□□ 1.32
LEMD3-203ENST00000541171 A6NL46 340 aa23.29■■□□□ 1.32
LEMD3-203ENST00000541171 AGAP14A8MT82 685 aa23.29■■□□□ 1.32
LEMD3-203ENST00000541171 MATN2O00339 956 aa23.29■■□□□ 1.32
LEMD3-203ENST00000541171 IFRD1O00458 451 aaPredicted RBP23.29■■□□□ 1.32
LEMD3-203ENST00000541171 BTN3A1O00481 513 aa23.29■■□□□ 1.32
LEMD3-203ENST00000541171 ZNF185O15231 689 aa23.29■■□□□ 1.32
LEMD3-203ENST00000541171 MAP3K7O43318 606 aa23.29■■□□□ 1.32
LEMD3-203ENST00000541171 STK10O94804 968 aaKnown RBP23.29■■□□□ 1.32
LEMD3-203ENST00000541171 TMEM63AO94886 807 aa23.29■■□□□ 1.32
LEMD3-203ENST00000541171 PVRP15151 417 aa23.29■■□□□ 1.32
LEMD3-203ENST00000541171 ST6GAL1P15907 406 aa23.29■■□□□ 1.32
LEMD3-203ENST00000541171 RORAP35398 523 aa23.29■■□□□ 1.32
LEMD3-203ENST00000541171 CDKN1CP49918 316 aaPredicted RBP23.29■■□□□ 1.32
LEMD3-203ENST00000541171 ZNF140P52738 457 aaPredicted RBP23.29■■□□□ 1.32
LEMD3-203ENST00000541171 MSLNQ13421 630 aaPredicted RBP23.29■■□□□ 1.32
LEMD3-203ENST00000541171 PTCHD3Q3KNS1 767 aa23.29■■□□□ 1.32
LEMD3-203ENST00000541171 FHL5Q5TD97 284 aa23.29■■□□□ 1.32
LEMD3-203ENST00000541171 RP1L1Q8IWN7 2480 aaPredicted RBP23.29■■□□□ 1.32
LEMD3-203ENST00000541171 TBL1YQ9BQ87 522 aa23.29■■□□□ 1.32
LEMD3-203ENST00000541171 MFRPQ9BY79 579 aa23.29■■□□□ 1.32
LEMD3-203ENST00000541171 NLNQ9BYT8 704 aa23.29■■□□□ 1.32
LEMD3-203ENST00000541171 XKR8Q9H6D3 395 aa23.29■■□□□ 1.32
LEMD3-203ENST00000541171 SERTAD3Q9UJW9 196 aa23.29■■□□□ 1.32
LEMD3-203ENST00000541171 ZNF451Q9Y4E5 1061 aa23.29■■□□□ 1.32
LEMD3-203ENST00000541171 C17orf113A0A1B0GUU1 675 aa23.28■■□□□ 1.32
LEMD3-203ENST00000541171 RBP3P10745 1247 aa23.28■■□□□ 1.32
LEMD3-203ENST00000541171 PDHA2P29803 388 aa23.28■■□□□ 1.32
LEMD3-203ENST00000541171 MC4RP32245 332 aa23.28■■□□□ 1.32
LEMD3-203ENST00000541171 HADHAP40939 763 aa23.28■■□□□ 1.32
LEMD3-203ENST00000541171 COPS2P61201 443 aa23.28■■□□□ 1.32
LEMD3-203ENST00000541171 PRKG2Q13237 762 aa23.28■■□□□ 1.32
LEMD3-203ENST00000541171 SPA17Q15506 151 aa23.28■■□□□ 1.32
LEMD3-203ENST00000541171 C4orf17Q53FE4 359 aa23.28■■□□□ 1.32
LEMD3-203ENST00000541171 ZRANB3Q5FWF4 1079 aa23.28■■□□□ 1.32
LEMD3-203ENST00000541171 HIST2H2BCQ6DN03 193 aa23.28■■□□□ 1.32
LEMD3-203ENST00000541171 DENND5AQ6IQ26 1287 aa23.28■■□□□ 1.32
LEMD3-203ENST00000541171 TAS2R42Q7RTR8 314 aa23.28■■□□□ 1.32
LEMD3-203ENST00000541171 SYTL1Q8IYJ3 562 aa23.28■■□□□ 1.32
LEMD3-203ENST00000541171 OR52E1Q8NGJ3 308 aa23.28■■□□□ 1.32
LEMD3-203ENST00000541171 HEXDCQ8WVB3 486 aa23.28■■□□□ 1.32
LEMD3-203ENST00000541171 OSBPL8Q9BZF1 889 aa23.28■■□□□ 1.32
LEMD3-203ENST00000541171 OR52A5Q9H2C5 316 aa23.28■■□□□ 1.32
LEMD3-203ENST00000541171 SYTL2Q9HCH5 934 aa23.28■■□□□ 1.32
LEMD3-203ENST00000541171 ZDHHC3Q9NYG2 299 aa23.28■■□□□ 1.32
LEMD3-203ENST00000541171 MAP4K5Q9Y4K4 846 aa23.28■■□□□ 1.32
LEMD3-203ENST00000541171 PRSS56P0CW18 603 aa23.27■■□□□ 1.32
LEMD3-203ENST00000541171 ATXN8OSP0DMR3 200 aa23.27■■□□□ 1.32
LEMD3-203ENST00000541171 ITGA1P56199 1179 aa23.27■■□□□ 1.32
LEMD3-203ENST00000541171 ZNF789Q5FWF6 425 aa23.27■■□□□ 1.32
LEMD3-203ENST00000541171 TC2NQ8N9U0 490 aa23.27■■□□□ 1.32
LEMD3-203ENST00000541171 FDCSPQ8NFU4 85 aa23.27■■□□□ 1.32
LEMD3-203ENST00000541171 DNAJC1Q96KC8 554 aaKnown RBP23.27■■□□□ 1.32
LEMD3-203ENST00000541171 TRAPPC9Q96Q05 1148 aa23.27■■□□□ 1.32
LEMD3-203ENST00000541171 HGH1Q9BTY7 390 aa23.27■■□□□ 1.32
LEMD3-203ENST00000541171 MAP10Q9P2G4 905 aa23.27■■□□□ 1.32
LEMD3-203ENST00000541171 G3BP2Q9UN86 482 aaKnown RBP23.27■■□□□ 1.32
LEMD3-203ENST00000541171 UTP20O75691 2785 aaKnown RBP23.27■■□□□ 1.32
LEMD3-203ENST00000541171 SPTAN1Q13813 2472 aaKnown RBP23.26■■□□□ 1.31
LEMD3-203ENST00000541171 PJA2O43164 708 aa23.26■■□□□ 1.31
LEMD3-203ENST00000541171 CAPN1P07384 714 aa23.26■■□□□ 1.31
LEMD3-203ENST00000541171 CTNNA1P35221 906 aaKnown RBP23.26■■□□□ 1.31
LEMD3-203ENST00000541171 VAV2P52735 878 aa23.26■■□□□ 1.31
LEMD3-203ENST00000541171 NAP1L1P55209 391 aaKnown RBP23.26■■□□□ 1.31
LEMD3-203ENST00000541171 GPR33Q49SQ1 333 aa23.26■■□□□ 1.31
LEMD3-203ENST00000541171 PAPD7Q5XG87 772 aaKnown RBP23.26■■□□□ 1.31
LEMD3-203ENST00000541171 ZNF449Q6P9G9 518 aa23.26■■□□□ 1.31
LEMD3-203ENST00000541171 SARM1Q6SZW1 724 aa23.26■■□□□ 1.31
LEMD3-203ENST00000541171 FAM198BQ6UWH4 519 aa23.26■■□□□ 1.31
LEMD3-203ENST00000541171 SERPINA9Q86WD7 417 aa23.26■■□□□ 1.31
LEMD3-203ENST00000541171 AMIGO1Q86WK6 493 aa23.26■■□□□ 1.31
LEMD3-203ENST00000541171 ZBTB2Q8N680 514 aa23.26■■□□□ 1.31
LEMD3-203ENST00000541171 SPATA13Q96N96 652 aa23.26■■□□□ 1.31
LEMD3-203ENST00000541171 NUDT9Q9BW91 350 aa23.26■■□□□ 1.31
LEMD3-203ENST00000541171 TFB2MQ9H5Q4 396 aaKnown RBP23.26■■□□□ 1.31
LEMD3-203ENST00000541171 MVB12BQ9H7P6 319 aa23.26■■□□□ 1.31
LEMD3-203ENST00000541171 PCDHA3Q9Y5H8 950 aa23.26■■□□□ 1.31
LEMD3-203ENST00000541171 C2orf74A8MZ97 194 aa23.25■■□□□ 1.31
LEMD3-203ENST00000541171 E7EQ34 232 aa23.25■■□□□ 1.31
LEMD3-203ENST00000541171 ZNF749O43361 778 aa23.25■■□□□ 1.31
LEMD3-203ENST00000541171 LDB2O43679 373 aa23.25■■□□□ 1.31
LEMD3-203ENST00000541171 DPM1O60762 260 aa23.25■■□□□ 1.31
LEMD3-203ENST00000541171 CEACAM4O75871 244 aa23.25■■□□□ 1.31
LEMD3-203ENST00000541171 SORBS2O94875 1100 aaKnown RBP23.25■■□□□ 1.31
LEMD3-203ENST00000541171 TPH1P17752 444 aa23.25■■□□□ 1.31
LEMD3-203ENST00000541171 ACRV1P26436 265 aa23.25■■□□□ 1.31
LEMD3-203ENST00000541171 RAPSNQ13702 412 aa23.25■■□□□ 1.31
LEMD3-203ENST00000541171 INPP5JQ15735 1006 aaPredicted RBP23.25■■□□□ 1.31
LEMD3-203ENST00000541171 PRR30Q53SZ7 412 aaPredicted RBP23.25■■□□□ 1.31
LEMD3-203ENST00000541171 AADACL2Q6P093 401 aa23.25■■□□□ 1.31
LEMD3-203ENST00000541171 HOOK3Q86VS8 718 aa23.25■■□□□ 1.31
LEMD3-203ENST00000541171 CLDN19Q8N6F1 224 aa23.25■■□□□ 1.31
LEMD3-203ENST00000541171 TFGQ92734 400 aaPredicted RBP23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms