RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 UNC5BQ8IZJ1 945 aa8.24□□□□□ -1.09
CHD4-208ENST00000540960 ARL14Q8N4G2 192 aa8.24□□□□□ -1.09
CHD4-208ENST00000540960 OR13J1Q8NGT2 312 aa8.24□□□□□ -1.09
CHD4-208ENST00000540960 PIWIL2Q8TC59 973 aaKnown RBP8.24□□□□□ -1.09
CHD4-208ENST00000540960 CCT6BQ92526 530 aa8.24□□□□□ -1.09
CHD4-208ENST00000540960 MARVELD3Q96A59 401 aa8.24□□□□□ -1.09
CHD4-208ENST00000540960 MYEOVQ96EZ4 313 aa8.24□□□□□ -1.09
CHD4-208ENST00000540960 CNDP1Q96KN2 507 aa8.24□□□□□ -1.09
CHD4-208ENST00000540960 RAB3IPQ96QF0 476 aaPredicted RBP8.24□□□□□ -1.09
CHD4-208ENST00000540960 TMEM245Q9H330 911 aa8.24□□□□□ -1.09
CHD4-208ENST00000540960 ZFYVE1Q9HBF4 777 aa8.24□□□□□ -1.09
CHD4-208ENST00000540960 GPAMQ9HCL2 828 aa8.24□□□□□ -1.09
CHD4-208ENST00000540960 OXSMQ9NWU1 459 aa8.24□□□□□ -1.09
CHD4-208ENST00000540960 KCTD5Q9NXV2 234 aa8.24□□□□□ -1.09
CHD4-208ENST00000540960 PLA2G4CQ9UP65 541 aa8.24□□□□□ -1.09
CHD4-208ENST00000540960 STK38LQ9Y2H1 464 aa8.24□□□□□ -1.09
CHD4-208ENST00000540960 PPIL1Q9Y3C6 166 aa8.24□□□□□ -1.09
CHD4-208ENST00000540960 U3KQA8 63 aa8.24□□□□□ -1.09
CHD4-208ENST00000540960 SCN8AQ9UQD0 1980 aa8.23□□□□□ -1.09
CHD4-208ENST00000540960 A0A0J9YYE9 177 aa8.23□□□□□ -1.09
CHD4-208ENST00000540960 ARHGAP10A1A4S6 786 aa8.23□□□□□ -1.09
CHD4-208ENST00000540960 CCDC162PA2VCL2 907 aa8.23□□□□□ -1.09
CHD4-208ENST00000540960 TRPC5OSA6NMA1 111 aa8.23□□□□□ -1.09
CHD4-208ENST00000540960 NEDD8-MDP1E9PL57 170 aa8.23□□□□□ -1.09
CHD4-208ENST00000540960 EIF3FO00303 357 aaPredicted RBP8.23□□□□□ -1.09
CHD4-208ENST00000540960 VPS4BO75351 444 aa8.23□□□□□ -1.09
CHD4-208ENST00000540960 PIAS1O75925 651 aa8.23□□□□□ -1.09
CHD4-208ENST00000540960 SRP72O76094 671 aaKnown RBP8.23□□□□□ -1.09
CHD4-208ENST00000540960 HSPA4LO95757 839 aa8.23□□□□□ -1.09
CHD4-208ENST00000540960 TRBC1P01850 177 aa8.23□□□□□ -1.09
CHD4-208ENST00000540960 CISD3P0C7P0 127 aa8.23□□□□□ -1.09
CHD4-208ENST00000540960 SLC35E2BP0CK96 405 aa8.23□□□□□ -1.09
CHD4-208ENST00000540960 XPAP23025 273 aaPredicted RBP8.23□□□□□ -1.09
CHD4-208ENST00000540960 ARNTP27540 789 aa8.23□□□□□ -1.09
CHD4-208ENST00000540960 ADSLP30566 484 aaPredicted RBP8.23□□□□□ -1.09
CHD4-208ENST00000540960 MAPK9P45984 424 aa8.23□□□□□ -1.09
CHD4-208ENST00000540960 RXRGP48443 463 aa8.23□□□□□ -1.09
CHD4-208ENST00000540960 SLC1A6P48664 564 aa8.23□□□□□ -1.09
CHD4-208ENST00000540960 ARRB1P49407 418 aaPredicted RBP8.23□□□□□ -1.09
CHD4-208ENST00000540960 RGS4P49798 205 aa8.23□□□□□ -1.09
CHD4-208ENST00000540960 SGSHP51688 502 aa8.23□□□□□ -1.09
CHD4-208ENST00000540960 ABCE1P61221 599 aaKnown RBP8.23□□□□□ -1.09
CHD4-208ENST00000540960 OCRLQ01968 901 aa8.23□□□□□ -1.09
CHD4-208ENST00000540960 GALNT1Q10472 559 aaPredicted RBP8.23□□□□□ -1.09
CHD4-208ENST00000540960 BST1Q10588 318 aa8.23□□□□□ -1.09
CHD4-208ENST00000540960 OLIG2Q13516 323 aa8.23□□□□□ -1.09
CHD4-208ENST00000540960 STARD3Q14849 445 aa8.23□□□□□ -1.09
CHD4-208ENST00000540960 KRT72Q14CN4 511 aa8.23□□□□□ -1.09
CHD4-208ENST00000540960 TTLL9Q3SXZ7 439 aa8.23□□□□□ -1.09
CHD4-208ENST00000540960 ACCSLQ4AC99 568 aa8.23□□□□□ -1.09
CHD4-208ENST00000540960 HECTD2Q5U5R9 776 aa8.23□□□□□ -1.09
CHD4-208ENST00000540960 FAM91A1Q658Y4 838 aa8.23□□□□□ -1.09
CHD4-208ENST00000540960 MBLAC2Q68D91 279 aa8.23□□□□□ -1.09
CHD4-208ENST00000540960 C22orf39Q6P5X5 142 aa8.23□□□□□ -1.09
CHD4-208ENST00000540960 TTC23LQ6PF05 361 aa8.23□□□□□ -1.09
CHD4-208ENST00000540960 BORAQ6PGQ7 559 aa8.23□□□□□ -1.09
CHD4-208ENST00000540960 EFL1Q7Z2Z2 1120 aaKnown RBP8.23□□□□□ -1.09
CHD4-208ENST00000540960 KIAA0907Q7Z7F0 614 aaPredicted RBP8.23□□□□□ -1.09
CHD4-208ENST00000540960 DENND6AQ8IWF6 608 aa8.23□□□□□ -1.09
CHD4-208ENST00000540960 RBFAQ8N0V3 343 aa8.23□□□□□ -1.09
CHD4-208ENST00000540960 ARHGAP24Q8N264 748 aa8.23□□□□□ -1.09
CHD4-208ENST00000540960 OR4K2Q8NGD2 314 aa8.23□□□□□ -1.09
CHD4-208ENST00000540960 RHEBL1Q8TAI7 183 aa8.23□□□□□ -1.09
CHD4-208ENST00000540960 STAG3L4Q8TBR4 150 aa8.23□□□□□ -1.09
CHD4-208ENST00000540960 KCNJ9Q92806 393 aa8.23□□□□□ -1.09
CHD4-208ENST00000540960 ARRDC3Q96B67 414 aa8.23□□□□□ -1.09
CHD4-208ENST00000540960 SCRN2Q96FV2 425 aa8.23□□□□□ -1.09
CHD4-208ENST00000540960 TCTN2Q96GX1 697 aa8.23□□□□□ -1.09
CHD4-208ENST00000540960 DNAJC1Q96KC8 554 aaKnown RBP8.23□□□□□ -1.09
CHD4-208ENST00000540960 TBATAQ96M53 351 aa8.23□□□□□ -1.09
CHD4-208ENST00000540960 ZNF778Q96MU6 729 aa8.23□□□□□ -1.09
CHD4-208ENST00000540960 OMDQ99983 421 aa8.23□□□□□ -1.09
CHD4-208ENST00000540960 HEPHQ9BQS7 1158 aa8.23□□□□□ -1.09
CHD4-208ENST00000540960 TRIM56Q9BRZ2 755 aaKnown RBP8.23□□□□□ -1.09
CHD4-208ENST00000540960 ABCG4Q9H172 646 aa8.23□□□□□ -1.09
CHD4-208ENST00000540960 SUV39H2Q9H5I1 410 aa8.23□□□□□ -1.09
CHD4-208ENST00000540960 RABEP2Q9H5N1 569 aa8.23□□□□□ -1.09
CHD4-208ENST00000540960 TFB2MQ9H5Q4 396 aaKnown RBP8.23□□□□□ -1.09
CHD4-208ENST00000540960 UCKL1Q9NWZ5 548 aa8.23□□□□□ -1.09
CHD4-208ENST00000540960 TMEM216Q9P0N5 145 aa8.23□□□□□ -1.09
CHD4-208ENST00000540960 HECAQ9UBI9 543 aaPredicted RBP8.23□□□□□ -1.09
CHD4-208ENST00000540960 SLC2A6Q9UGQ3 507 aa8.23□□□□□ -1.09
CHD4-208ENST00000540960 FBXO10Q9UK96 956 aa8.23□□□□□ -1.09
CHD4-208ENST00000540960 VPS4AQ9UN37 437 aa8.23□□□□□ -1.09
CHD4-208ENST00000540960 ZNF711Q9Y462 761 aa8.23□□□□□ -1.09
CHD4-208ENST00000540960 PCDHGC4Q9Y5F7 938 aa8.23□□□□□ -1.09
CHD4-208ENST00000540960 A0A1W2PPC4 97 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 FOXO6A8MYZ6 492 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 CFAP99D6REC4 459 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 E5RI56 91 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 PRMT5O14744 637 aaPredicted RBP8.22□□□□□ -1.09
CHD4-208ENST00000540960 SLC22A2O15244 555 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 YKT6O15498 198 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 LZTS3O60299 673 aaPredicted RBP8.22□□□□□ -1.09
CHD4-208ENST00000540960 MAGEC1O60732 1142 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 DNAJC8O75937 253 aaPredicted RBP8.22□□□□□ -1.09
CHD4-208ENST00000540960 HAUS5O94927 633 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 DDAH2O95865 285 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 PRLP01236 227 aa8.22□□□□□ -1.09
CHD4-208ENST00000540960 PRNPP04156 253 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms